|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | EsuBft93_8 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 3 |
Length | 348 |
Hectar predicted targeting category | other localisation |
Date last modified | 2016-06-13 |
Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft93_8a-0001 ID=EsuBft93_8a-0001|Name=EsuBft93_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3483bp|location=Sequence derived from alignment at Scaffold_523:1127991..1132388+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCGAGAAACCGACGGGGAAGGACAGCAACGAGAGCGTGTACGAAGCGGAG CGGGTCGAGTTTGGTCGTGCTAGGACTGGCCACAGCGGAACCGGAGCAGC GGAACCGGAGCAGCGGAACCGGAGCAGGCGGACGGCATCGAACCGTGGCG CACGGACAAACATATGTTGTGTTGTCAATTATTTTCCCGTTTAGACTAAT TCCTGAATACACGTGTTGGGTGTGTGTGATGACGTCATTGGTTTTGTAGA GAGACGCGGCAGAGATGGCGCGGATAACCCGGGTGCCTCAATTGCGTACC TGCATCGTGGAAGACCCCTTCAATGTGGAACGATTCCTAGTCACTGTCGA TGTTTACACTGCTGTGCCAAACACAGATGATCTGGATAGATTCATGTCAA TTGCAATGATGGCTTTGGTTGGGTGTTCTTCTTCATGGGTCACGCTCGGG CCTCGGCTTCCGGCGGTGACCGCCAGCCGGAGCTCCGGCGTGCGGATGAC CAAGTCCAGGCTCACAGTGTCGCGTTTGGCCCATATGTCGGTGGGTTCGG TGGGGGAGGGGGAGCCTAGCGAGGGCACCCCGCTCGCGTCTGAGAATGCG CGTGGGCCCGGGGAGTCGGGAGGCCTCGGTATGGTGCCGGTGCGGTCGCC GTGGGGCAGGGGCGCGGGCGGGGGGGCAAGTGCGCCCGCAAGGTCCAACG CCAAAGAGGAGGCGAGGAGGGAGGCCACCATTTGGCAAGCCAAACATAAT CAGACACTGTGGCTTACCAAGATCGCTGGGTTGCTGAAGAACTTCTGGCC GGAGTCGGGACAGGATGGGAGTCGTGGGCCCGGGGGGTCGGGAGGCCTCG GTCTGGTGCCGGTGCCGTCGCCATGGGGCGGGGGTGCGGGCGGGGGGGCG AGTGCGCCCGCGAGGTCCAACGCCAAAGAGGAGCCGAGGAGGGAGGCCAC CATTTGGCAGGCCAAATATAATCAGAAACTCTGGGTACTTAGGGGGCAGC GGGGGCCGGAGCCCGGGCCACAGAAGGAGGACCTGCAGGGTTTGATGGGC GATATCGTTCACGTCACGGGCGACGTCCTCGCTCAGATGCGTGCGTTTTC GTCTTCCGACGTCAAGAGCTTCCGGCCCGTGGGGGTTGCCCGCACGTCGT CTATTGCAGACAACTTCGACGAAATGTGTGAAGCGGTCATGCCGCTGGTG AAGTTTGGTCTAGATTCGTCCACGACCACGGGTGTGAAATCGTTGCGGCG GTTGGAACCCGTAGCCATAGCCATGACGGACACGCGCTCCAGGTTTCGGA CTACTCTCGTGCGGAATAGTGATGTGTTTCCGGACGAGTACCAGCGTGCG GCACTGCCAAGGTTGCCGAACGAGGACGTCAAATTGTGGCAACGGCCATC ATCACCTGGATGTACACCTTCACGAAGATGCATTTTCCGCCGGATGCGTT CGACGGCCACACCTTGCCGCCGGTGCCCGAGTTCCCCAAAATCAACAACT TCGGTGAACGGGGGGTGAATCTATTCCGGCTGGTCCTGAGTGACGGAGGA TCCCTCCCCGGAACAGGGGAGTTGCGGGGCGGGAGCGGCAAGCGTAAGGC GGGCCAACTGGATCGGGGTGATTCATCGTCACGGAGGCGCGTCTCAAGGG AGTGCTTCCAGTTCCGCGACTCTGGCACGTGCCCTTTCGGCGACAAATGC AGGTTTGAGCACGTCAAGCGCCGATATTGGTGAAGTACAGGAAGTGGCGG TGGTGGGGGCGGGAACTGCGGTGGCGGGGGGCGGGAGTCGGCTGGTGGTC AGGGTGGTGGCGTCGTCCGGGGAGGAGGACAGGCTGACGGTGGCGACGGT GGTGGCTCGTCGTCGGCCTTGGTGGTGCGGGGTGGCAGCAAATAGGGGTG TGGGCTCCGCCGGGTGGCGGGGCCAACTCCTGTGTCGGTTCCAGCTGAGA GGCCGCAACAGCAGCCAGGTCATAGGGAGATGGCGTCCCGGGCCTTGGCT GGCGTGGGGATCCGAGGCGAGCGCTGTGAGGGCCTGCCCGGAGTGGCTTC CGACTTGGANGTGGTTGGCTGAGTGTGAAGCTTCAAAACGGTACGTCCAT CTTAACCATGTGGCGCATGTGGGTTCAAACTTGCTTCGACGGTGTGGGGG ACGCGTGGAAAGGTGGGAACCTGGACGCTGAAGTGGCGTATGGCGACCAT CCTAGCGCGCTACTGCACAGAGATCGGATCACAGACAAAGTTGTATTGGA CGTGATATTGGGGCGTGCGTTGATTTTCGATGTTCGGTTCATCCGAGAAA TCTTAGGTGTTCGAGTGTCGCCGTTGGGCGTCATCGACGAACCGAAGTTC AGAATTATTCACGATCTCACTTTCACCTCTGGCGTGCCCATCCGTACGAG CGTAAATCACGATACGGACTTTGATCAAGCACCTGAATGCCTCTTGGATC ATGTGTTGAGTGACATTCTGAAGCTGGTGCTGTACTTGCGACAAGTACAC GGGGTGTCGTTGGAAATTCTGATCTGCCGCATTGATGTGAAAGAAGCCTT CCGGCAAATCCCCGTGGATCCATCTCGGGCATCGGTTTTTGGGTACACGA TCGGACATCACGCGGTTGTTGACCTACGGTGTCAAGTTGGATGGCGGTCG ATCCCAGGGTTTTGGTCCTTGTTCTCGTCCGCTTTGGAACACTCACACAC ACATACATTTCAAGACGCGTCCGTCTCTCCCGCAGGTGCTGCGACTGTGC AGCATGTTCAAGTAGTGTCCCCACCAGACGAAAGTACAACGGTGCCGTTA CCTGTTGATTGCCAGACTATTGTGGGCGACGGGGCGTTTGCTGGTTCTCC GTTTTTCGTGCGATACCTCGATGATGATGGCGTGTTGATTGAAGGAAAAG TTTTCGCTGATGGTCACCGATGTTTGCGCGCGGTGCGTTCTCTCGCTACG GATCACTTTCGTCTGCTGGAAGAGAGAGGCCCAGCAGACCCGCCGTTGTT GTCGCAAGGATAGATCACCGATTTCGCTACCCGTCTGGATGTGTTCGGTT GGACATTGGACACTCAGCAACTCACGATTACTATGGCCGACACGAAACAG CAGAGACTGGGACGCTTTTTGGCTGCGTGGCCCGCGACGCGGAGAGTCGC TACAGCTCGTCAAGTAGCCGAGTTGACAGGGTTTCTCATTCACGTTTCGT TCGTGTTGCGGCCAGGAAGTTTTTTGTGGGGTGCCTTTTATCCGCGGTAG GGATGCCTGCTTCGTCTACTTTCGCGTCCCAAGTGCCGAGCCCGAACAGA CGTGTAGTGCTGGGTCCATTATTCCACGATGATCTCGAATTTTGGCGGTG GTTCCACGGTCATGGTCTCTCGTTGCGCGGCGGAAGTTTGTGTGTGCCCA TGTACAACATTTTGGAACGCCCGCCTGCACTATCCGTGTTAACCGATGCG TCTAAGCAAGCAATTGGAGGGTATCGTTTGCAA back to topprotein sequence of EsuBft93_8a-0001 >EsuBft93_8 ID=EsuBft93_8|Name=EsuBft93_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=417bp
MARITRVPQLRTCIVEDPFNVERFLVTVDVYTAVPNTDDLDRFMSIAMMA LVGCSSSWVTLGPRLPAVTASRSSGVRMTKSRLTVSRLAHMSVGSVGEGE PSEGTPLASENARGPGESGGLGMVPVRSPWGRGAGGGASAPARSNAKEEA RREATIWQAKHNQTLWLTKIAGLLKNFWPESGQDGSRGPGGSGGLGLVPV PSPWGGGAGGGASAPARSNAKEEPRREATIWQAKYNQKLWVLRGQRGPEP GPQKEDLQGLMGDIVHVTGDVLAQMRAFSSSDVKSFRPVGVARTSSIADN FDEMCEAVMPLVKFGLDSSTTTGVKSLRRLEPVAIAMTDTRSRFRTTLVR NSDVFPDEYQRAALPRLPNEDVKLWQRPSSPGCTPSRRCIFRRMRSTATP CRRCPSSPKSTTSVNGG back to topmRNA from alignment at Scaffold_523:1127991..1132388+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft93_8a-0001 ID=EsuBft93_8a-0001|Name=EsuBft93_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4398bp|location=Sequence derived from alignment at Scaffold_523:1127991..1132388+ (Ectocarpus subulatus male Bft15b) GCGAGAAACCGACGGGGAAGGACAGCAACGAGAGCGTGTACGAAGCGGAG
CGGGTCGAGTTTGGTCGTGCTAGGACTGGCCACAGCGGAACCGGAGCAGC
GGAACCGGAGCAGCGGAACCGGAGCAGGCGGACGGCATCGAACCGTGGCG
CACGGACAAACATATGTTGTGTTGTCAATTATTTTCCCGTTTAGACTAAT
TCCTGAATACACGTGTTGGGTGTGTGTGATGACGTCATTGGTTTTGTAGA
GAGACGCGGCAGAGATGGCGCGGATAACCCGGGTGCCTCAATTGCGTACC
TGCATCGTGGAAGACCCCTTCAATGTGGAACGATTCCTAGTCACTGTCGA
TGTTTACACTGCTGTGCCAAACACAGATGATCTGGATAGATTCATGTCAA
TTGCAATGATGGCTTTGGTTGGGTGTTCTTCTTCATGGTATGTCCACGGA
CTCTGACAGCACTTCAGACAGCNAGATGATTGTCAATTGCAATGATGGCT
TTGGTTGGTAGTTCTTCTTCATTGTATGTCCACGGACCCATTCTGACAGC
ACTTCAGACAGCAGCTGCATGCCCCGAGCTTGTGTACCATGCACCATGGT
GTTATTATTGTACAGACAGCACTTCAGACAGCAGTACGCTGNATTTAGAT
CTTGTGATGACTCTAGCATTTTTGTGACCACGGACCGAGTCTTTGCTAGA
TTTTGGGATTAGCAACTGACACGAATTAAATGTGAACAAAAACAAGAAAA
AACAACAGCAACAAGCATGGAGTCAGCATGAAGTGTCTGAAACCTGACCA
GAAGAGTAGACTTGGGAGCACTTGTTGGTCTGCCCCAAGGAAGCACGAGG
GAGGCTGCTGCAGCCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCAACATCTGCGGATG
ATTGCGTTGTTGAAGCCACGTCACCTGCTGGTGAATCCACGCCACCGGCA
GCAGCCCTCGCGGCCGCGCAGGGTCACGCTCGGGCCTCGGCTTCCGGCGG
TGACCGCCAGCCGGAGCTCCGGCGTGCGGATGACCAAGTCCAGGCTCACA
GTGTCGCGTTTGGCCCATATGTCGGTGGGTTCGGTGGGGGAGGGGGAGCC
TAGCGAGGGCACCCCGCTCGCGTCTGAGAATGCGCGTGGGCCCGGGGAGT
CGGGAGGCCTCGGTATGGTGCCGGTGCGGTCGCCGTGGGGCAGGGGCGCG
GGCGGGGGGGCAAGTGCGCCCGCAAGGTCCAACGCCAAAGAGGAGGCGAG
GAGGGAGGCCACCATTTGGCAAGCCAAACATAATCAGACACTGTGGGTAC
TTCGGGGGCAGCGGGGGCCGGAGCCCGGGCCNAGCAGCTTACCAAGATCG
CTGGGTTGCTGAAGAACTTCTGGCCGGAGTCGGGACAGGATGGGAGTCGT
GGGCCCGGGGGGTCGGGAGGCCTCGGTCTGGTGCCGGTGCCGTCGCCATG
GGGCGGGGGTGCGGGCGGGGGGGCGAGTGCGCCCGCGAGGTCCAACGCCA
AAGAGGAGCCGAGGAGGGAGGCCACCATTTGGCAGGCCAAATATAATCAG
AAACTCTGGGTACTTAGGGGGCAGCGGGGGCCGGAGCCCGGGCCACAGAA
GGAGGACCTGCAGGGTTTGATGGGCGATATCGTTCACGTCACGGGCGACG
TCCTCGCTCAGATGCGTGCGTTTTCGTCTTCCGACGTCAAGAGCTTCCGG
CCCGTGGGGGTTGCCCGCACGTCGTCTATTGCAGACAACTTCGACGAAAT
GTGTGAAGCGGTCATGCCGCTGGTGAAGTTTGGTCTAGATTCGTCCACGA
CCACGGGTGTGAAATCGTTGCGGCGGTTGGAACCCGTAGCCATAGCCATG
ACGGACACGCGCTCCAGGTTTCGGACTACTCTCGTGCGGAATAGTGATGT
GTTTCCGGACGAGTACCAGCGTGCGGCACTGCCAAGGTTGCCGAACGAGG
ACGTCAAATTGTGGCAACGGCCATCATCACCTGGATGTACACCTTCACGA
AGATGCATTTTCCGCCGGATGCGTTCGACGGCCACACCTTGCCGCCGGTG
CCCGAGTTCCCCAAAATCAACAACTTCGGTGAACGGGGGGTGAATCTATT
CCGGCTGGTCCTGAGTGACGGAGGATCCCTCCCCGGAACAGGGGAGTTGC
GGGGCGGGAGCGGCAAGCGTAAGGCGGGCCAACTGGATCGGGGTGATTCA
TCGTCACGGAGGCGCGTCTCAAGGGAGTGCTTCCAGTTCCGCGACTCTGG
CACGTGCCCTTTCGGCGACAAATGCAGGTTTGAGCACGTCAAGCGCCGAT
ATTGGTGAAGTACAGGAAGTGGCGGTGGTGGGGGCGGGAACTGCGGTGGC
GGGGGGCGGGAGTCGGCTGGTGGTCAGGGTGGTGGCGTCGTCCGGGGAGG
AGGACAGGCTGACGGTGGCGACGGTGGTGGCTCGTCGTCGGCCTTGGTGG
TGCGGGGTGGCAGCAAATAGGGGTGTGGGCTCCGCCGGGTGGCGGGGCCA
ACTCCTGTGTCGGTTCCAGCTGAGAGGCCGCAACAGCAGCCAGGTCATAG
GGAGATGGCGTCCCGGGCCTTGGCTGGCGTGGGGATCCGAGGCGAGCGCT
GTGAGGGCCTGCCCGGAGTGGCTTCCGACTTGGANGTGGTTGGCTGAGTG
TGAAGCTTCAAAACGGTACGTCCATCTTAACCATGTGGCGCATGTGGGTT
CAAACTTGCTTCGACGGTGTGGGGGACGCGTGGAAAGGTTCGTCGCCGCT
GTTGGCCAGAAGTTCTTTCTGCCCCATGTCGATGTGATGCGTGTCAAGGC
GCATNGTTCTTTCTGCCCCATGTCGATGTGATGCGCGTCAAGGCGCATTT
TGGAGAAGTGAAATTTCCCCGAGTTGATCAACTTCTGAGATCGTTGTCTC
CGGGTGCGCCGGTTGACGTGGTCTCAGGTGGGAACCTGGACGCTGAAGTG
GCGTATGGCGACCATCCTAGCGCGCTACTGCACAGAGATCGGATCACAGA
CAAAGTTGTATTGGACGTGATATTGGGGCGTGCGTTGATTTTCGATGTTC
GGTTCATCCGAGAAATCTTAGGTGTTCGAGTGTCGCCGTTGGGCGTCATC
GACGAACCGAAGTTCAGAATTATTCACGATCTCACTTTCACCTCTGGCGT
GCCCATCCGTACGAGCGTAAATCACGATACGGACTTTGATCAAGCACCTG
AATGCCTCTTGGATCATGTGTTGAGTGACATTCTGAAGCTGGTGCTGTAC
TTGCGACAAGTACACGGGGTGTCGTTGGAAATTCTGATCTGCCGCATTGA
TGTGAAAGAAGCCTTCCGGCAAATCCCCGTGGATCCATCTCGGGCATCGG
TTTTTGGGTACACGATCGGACATCACGCGGTTGTTGACCTACGGTGTCAA
GTTGGATGGCGGTCGATCCCAGGGTTTTGGTCCTTGTTCTCGTCCGCTTT
GGAACACTCACACACACATACATTTCAAGACGCGTCCGTCTCTCCCGCAG
GTGCTGCGACTGTGCAGCATGTTCAAGTAGTGTCCCCACCAGACGAAAGT
ACAACGGTGCCGTTACCTGTTGATTGCCAGACTATTGTGGGCGACGGGGC
GTTTGCTGGTTCTCCGTTTTTCGTGCGATACCTCGATGATGATGGCGTGT
TGATTGAAGGAAAAGTTTTCGCTGATGGTCACCGATGTTTGCGCGCGGTG
CGTTCTCTCGCTACGGATCACTTTCGTCTGCTGGAAGAGAGAGGCCCAGC
AGACCCGCCGTTGTTGTCGCAAGGATAGATCACCGATTTCGCTACCCGTC
TGGATGTGTTCGGTTGGACATTGGACACTCAGCAACTCACGATTACTATG
GCCGACACGAAACAGCAGAGACTGGGACGCTTTTTGGCTGCGTGGCCCGC
GACGCGGAGAGTCGCTACAGCTCGTCAAGTAGCCGAGTTGACAGGGTTTC
TCATTCACGTTTCGTTCGTGTTGCGGCCAGGAAGTTTTTTGTGGGGTGCC
TTTTATCCGCGGTAGGGATGCCTGCTTCGTCTACTTTCGCGTCCCAAGTG
CCGAGCCCGAACAGACGTGTAGTGCTGGGTCCATTATTCCACGATGATCT
CGAATTTTGGCGGTGGTTCCACGGTCATGGTCTCTCGTTGCGCGGCGGAA
GTTTGTGTGTGCCCATGTACAACATTTTGGAACGCCCGCCTGCACTATCC
GTGTTAACCGATGCGTCTAAGCAAGCAATTGGAGGGTATCGTTTGCAA back to topCoding sequence (CDS) from alignment at Scaffold_523:1127991..1132388+ >EsuBft93_8a-0001 ID=EsuBft93_8a-0001|Name=EsuBft93_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1254bp|location=Sequence derived from alignment at Scaffold_523:1127991..1132388+ (Ectocarpus subulatus male Bft15b) ATGGCGCGGATAACCCGGGTGCCTCAATTGCGTACCTGCATCGTGGAAGA CCCCTTCAATGTGGAACGATTCCTAGTCACTGTCGATGTTTACACTGCTG TGCCAAACACAGATGATCTGGATAGATTCATGTCAATTGCAATGATGGCT TTGGTTGGGTGTTCTTCTTCATGGGTCACGCTCGGGCCTCGGCTTCCGGC GGTGACCGCCAGCCGGAGCTCCGGCGTGCGGATGACCAAGTCCAGGCTCA CAGTGTCGCGTTTGGCCCATATGTCGGTGGGTTCGGTGGGGGAGGGGGAG CCTAGCGAGGGCACCCCGCTCGCGTCTGAGAATGCGCGTGGGCCCGGGGA GTCGGGAGGCCTCGGTATGGTGCCGGTGCGGTCGCCGTGGGGCAGGGGCG CGGGCGGGGGGGCAAGTGCGCCCGCAAGGTCCAACGCCAAAGAGGAGGCG AGGAGGGAGGCCACCATTTGGCAAGCCAAACATAATCAGACACTGTGGCT TACCAAGATCGCTGGGTTGCTGAAGAACTTCTGGCCGGAGTCGGGACAGG ATGGGAGTCGTGGGCCCGGGGGGTCGGGAGGCCTCGGTCTGGTGCCGGTG CCGTCGCCATGGGGCGGGGGTGCGGGCGGGGGGGCGAGTGCGCCCGCGAG GTCCAACGCCAAAGAGGAGCCGAGGAGGGAGGCCACCATTTGGCAGGCCA AATATAATCAGAAACTCTGGGTACTTAGGGGGCAGCGGGGGCCGGAGCCC GGGCCACAGAAGGAGGACCTGCAGGGTTTGATGGGCGATATCGTTCACGT CACGGGCGACGTCCTCGCTCAGATGCGTGCGTTTTCGTCTTCCGACGTCA AGAGCTTCCGGCCCGTGGGGGTTGCCCGCACGTCGTCTATTGCAGACAAC TTCGACGAAATGTGTGAAGCGGTCATGCCGCTGGTGAAGTTTGGTCTAGA TTCGTCCACGACCACGGGTGTGAAATCGTTGCGGCGGTTGGAACCCGTAG CCATAGCCATGACGGACACGCGCTCCAGGTTTCGGACTACTCTCGTGCGG AATAGTGATGTGTTTCCGGACGAGTACCAGCGTGCGGCACTGCCAAGGTT GCCGAACGAGGACGTCAAATTGTGGCAACGGCCATCATCACCTGGATGTA CACCTTCACGAAGATGCATTTTCCGCCGGATGCGTTCGACGGCCACACCT TGCCGCCGGTGCCCGAGTTCCCCAAAATCAACAACTTCGGTGAACGGGGG GTGA back to top
|