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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D8LPQ0 |
ProteomeId | EsuBft925_11 |
Protein domains | IPR000470 |
Protein domains | IPR003959 |
Protein domains | IPR000641 |
Protein domains | IPR027417 |
Protein domains | SignalP-TM |
Protein domains | SignalP-noTM |
Protein domains | IPR003593 |
Protein domains | SIGNAL_PEPTIDE_N_REGION |
Protein domains | SIGNAL_PEPTIDE_C_REGION |
Protein domains | SIGNAL_PEPTIDE_H_REGION |
Protein domains | SIGNAL_PEPTIDE |
Protein domains | PTHR13779 |
Protein domains | NON_CYTOPLASMIC_DOMAIN |
Owner | apollo_admin@sb-roscoff.fr |
Note | protein cbbx chloroplastic os:guillardia theta gn:cbbx pe:3 sv:1 [Automatic annotation] |
Nb exon | 9 |
Max annot lvl | 2759|Eukaryota |
Length | 1449 |
Hectar predicted targeting category | signal peptide |
Evalue | 6.45e-265 |
EggNOG OGs | COG0464@1|root,KOG0730@2759|Eukaryota |
Ec32 ortholog description | P-loop containing nucleoside triphosphate hydrolase |
Ec32 ortholog | Ec-18_002020.1 |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Description | ATP binding |
COG category | O |
Cross References
External references for this mRNA
Database | Accession |
GO | 0005524 |
GO | 0009536 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft925_11a-0001 ID=EsuBft925_11a-0001|Name=EsuBft925_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1449bp|location=Sequence derived from alignment at Scaffold_491:467360..472657+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ACACATCCCTCCATCTAATTATGAAGGCAGCAGCGATGATCGCGCTCGCC ATGTGCGGAGCTACGGGAACGGCCGCGTTCCAGATCCCGGTTTTCACTCG TCCAGCAACGGGCGCATCAAGCCGCAGCGCGCTCTCGATGGCGCAGCCCA CGGTCGGGACCGGGACGGGCAAGGGTCTCCAGTACAATCCGGAGAAGTAT ACCGACGAGAAGAACGCGAAAAACTACCGGAAACTGTCCGAAGCGCTAGA GGTGTGGAAAAAAAGATGTGTGTACATGCACGTGGTGGCTGCGGATGTGG AGGCTCGCTTGGCCGAGGAGGCGGCAGACCAGAGGGCGAGGGCGGGCGAG ATCCGCCGAGAAGCGAGGATGGCCAAAATTAAGTTCATGGAGGACATGCC CGACAACACAGAGGCGAGGGCATGGTTTTCACAGCAGTTGGGAGTTGATG CACGATTCGAGGATGCAAAAGTGGGTACCGTGGAAGAGTTCATGTTCAAG GAGGGCGTGCGGGACATCCTCGAGAAGCTGGACTCGGACCTTGTGGGGCT GATTCCCGTTAAGCTGAGAGTGCGCCAAATCGCCGCCCTGCTGGTGCTTG ACAAGATGCGCGGCAAGCTGGGCTTCGACACGTCCGTGCCTTCCCTCCAC ATGTGCTTCACGGGCGCCCCCGGCACGGGTAAGACCACCGTTGCCCTTCG CATGGGGCAAATCTTGCAGCGTATGGGCTACTGCCGACAGGGGCACGTCG TGGTGGCAACGAGGGACGACCTGGTGGGCCAGTACGTTGGCCACACCGCC CCCAAGACCAAGGAAATGATCAAGAAGGCATTCGGAGGTATTCTGCTGGT CGACGAGGCGTACTACCTGTACAACGCGGCGAACGACAAAGACTACGGTC AGGAGTCGATCGAGATCCTCCTCAACGTCATGGAGGAGCAGAAGGACGAC CTCATCGTCACTCTCGCCGGATACAAGGACCGCATGGACCGCTTCTTCTC CTACATCCCGGGTATGTCGAGCCGTATCGGAAACCACATCGACTTCCCCA ACTATTTGGTCGACGAGCTGGTAGAGATCGCGATGGTGATGGCCAGGGAC CTCCAGTACTTCATGGACGACGCGGCCCTCGCGGTTTTCAAGGAATACAT CGAGACCCGCATGAAGTTCCCTTTCTTCTCCAACGCGCGAACTGTCCGTA ACGCCATGGACCGTGCTCGCATGAACTCTGCAATCCGCGTTTTCAACAAC GCTGTAATGTCTGAAGGCGACGGAGGCATGGTTTCCGAGAAGGACTTGGC TGTGATCTGCGACGCGGATTTCCAAGTTCTACTTGACGAGCTCTTGGCGT ACGAGGCCATTGGCAAGCTCGACGCTATCGTTGCCTAAGATAATTAAACG TACGATGCTGCGAGCTTGTAGAATGTGCCAGGATCAGAGCATAGCTACT back to topprotein sequence of EsuBft925_11a-0001 >EsuBft925_11 ID=EsuBft925_11|Name=EsuBft925_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=455bp
MKAAAMIALAMCGATGTAAFQIPVFTRPATGASSRSALSMAQPTVGTGTG KGLQYNPEKYTDEKNAKNYRKLSEALEVWKKRCVYMHVVAADVEARLAEE AADQRARAGEIRREARMAKIKFMEDMPDNTEARAWFSQQLGVDARFEDAK VGTVEEFMFKEGVRDILEKLDSDLVGLIPVKLRVRQIAALLVLDKMRGKL GFDTSVPSLHMCFTGAPGTGKTTVALRMGQILQRMGYCRQGHVVVATRDD LVGQYVGHTAPKTKEMIKKAFGGILLVDEAYYLYNAANDKDYGQESIEIL LNVMEEQKDDLIVTLAGYKDRMDRFFSYIPGMSSRIGNHIDFPNYLVDEL VEIAMVMARDLQYFMDDAALAVFKEYIETRMKFPFFSNARTVRNAMDRAR MNSAIRVFNNAVMSEGDGGMVSEKDLAVICDADFQVLLDELLAYEAIGKL DAIVA back to topmRNA from alignment at Scaffold_491:467360..472657+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft925_11a-0001 ID=EsuBft925_11a-0001|Name=EsuBft925_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5298bp|location=Sequence derived from alignment at Scaffold_491:467360..472657+ (Ectocarpus subulatus male Bft15b) ACACATCCCTCCATCTAATTATGAAGGCAGCAGCGATGATCGCGCTCGCC
ATGTGCGGAGCTACGGGAACGGCCGCGTTCCAGATCCCGGTTTTCACTCG
TCCAGCAACGGGCGCATCAAGCCGCAGCGCGCTCTCGATGGCGCAGCCCA
CGGTCGGGACCGGGACGGGCAAGGGTCTCCAGTACAATCCGGAGAAGTAT
ACCGACGAGAAGAACGCGAAAAACTACCGGAAACTGTCCGAAGCGCTAGA
GGTGTGGAAAAAAAGATGTGTGTACATGCACGTGGTGGTATGTACTTCCT
CTCGGGGTGACGTTTGGGGTTTGCATCTTTGACCCGTCCGTCGTCGCCAT
CAGTCCCGCAGCCGTGCTGAGAACGAAAATGTATGTGGGCCTGCTCCTGG
TGTGAGGTGCGGTGGTTCTGCAGGCTCTTGATGCCCCCGAAAAACATCGC
ACTGCACACCATCCCCTAAAATCAACTGCAAGTTCGAACAGGACTACTCG
TTTTGCATACGAAACCATGACGATCAGTGTGCGTACGCAGGAAAGTTGGT
TCACTCGTCGGATGTGTGCGAGCAAACCTAACCCCAAGGTCGTCGCATCC
CCCTCCTAGACAGGCATTCATAGCTCGATTGCGCCACAATCGAGAGGGCA
TGGCTGCCGAAAAGAACGAGTTGGGAAAGATGTCGATCTCGTCGATAGCA
GACCTATCGCCCGGATTTCGCACCGTCTTGGTTGCGGAACAGCAGTAGAG
CGAATCTAGAAGGCACGGCGGGTTGCATCACTCGCACAATAGTAGTCTTC
GTACTAATTATTTCCAGAGTTTCATAAAATGTTGTGTTGAATTTCAACCT
TTTGTTGCGCTTTCGTACAGCAAGGTGTTACGTACAACGGCGGCACGTAC
GAGTAGCTCTCGATGCTGTCCTCTCAATAGAGCGAAGTCGCGTCCAAACT
TGGTGCCCGCGCAATATGCCAAGGCCCACCGTTCTCAACGACGAGGACCA
TGTGGGAAACAAAGCGTTGGTATGATACATATTCTGTTGGACTTGTCTGA
CACGACAAAGATTGGTTTGCTTTCTCCAGGCTGCGGATGTGGAGGCTCGC
TTGGCCGAGGAGGCGGCAGACCAGAGGGCGAGGGCGGGCGAGATCCGCCG
AGAAGCGAGGATGGCCAAAATTAAGTTCATGGAGGACATGCCCGACAACA
CAGAGGCGAGGGCATGGTTTTCACAGCAGTTGGGAGTTGATGCACGATTC
GAGGATGCAAAAGTACCTACAGCTGTCGGAGCGTGGCTTGTTCGCCCGTT
TAGGTGGTGGTGAGGAAATTCAGGCAAATCCTTGTCAATGAACTGAAGCC
CATGAGACATTTAGGAGTGCCAGCAGCGCAGAGGAATCTCTTGCGGAATA
CAGCAATCACGCCCGCTTTACATCGCGTGCGTGCGAGTTGTATGTTGGAC
GACATAGGCAGGCCAAATATGCGGAAATGATACCCCACGATCTTTATATT
CCCCGGCGGCGCTGCAGGTGGGTACCGTGGAAGAGTTCATGTTCAAGGAG
GGCGTGCGGGACATCCTCGAGAAGCTGGACTCGGACCTTGTGGGGCTGAT
TCCCGTTAAGCTGAGAGTGCGCCAAATCGCCGCCCTGCTGGTGCTTGACA
AGGTGAGAATAGTATTTGCTGCAGACTCTTGTAATCCATGGTGGCGTCCC
TCTTGGGTTCTTTTGATGATGCTGCGGTCGAGGCATCCCCGATGCTATCA
GCTTCTCGCACCCGACAGCCAACAACTGGGTGTACTGACGGATGTGGGGA
CTACTCGAGGTTGTTGCGCGGGGCAACTGCTAACGTACATGTTGGAAGTG
CGAGCACCCTGCAGGTTGTTGTTTGCTAGTTATGCGTGTTAGTCTGCGGC
GTACTACAGCAGTAGAACAGTGTCACTCACTGGAAGCCGTTTGGTGTGTT
CATACGAATTCCTCGGAGTTCAGAAGCCCGGCCCGCATTACAAATAGTGA
AAATGTTCCGAAGAGTCTTGCCGACGGTAGATCCGTGCGCGGTCGAGAAC
TGCGGTCAGCATCTACCGATTGTTGTATTGCTGACACTGCTGGCTTGGAG
CCCAAGATGAACCAGCCGACGTTGTCAACACGTCCAGCGGATGGACACTT
CTGAGCCTCCTGTAGCTCCGCATCTTTGCAACTAATGCTGGCGATTCGCT
CTGCTCTCTGCCTCGTTTTCTCTATTCGTCATAGATGCGCGGCAAGCTGG
GCTTCGACACGTCCGTGCCTTCCCTCCACATGTGCTTCACGGGCGCCCCC
GGCACGGGTAAGACCACCGTTGCCCTTCGCATGGGGCAAATCTTGCAGCG
TATGGGCTACTGCCGACAGGGGCACGTCGTGGTGGCAACGAGGGACGACC
TGGTGGGCCAGTACGTTGGCCACACCGCCCCCAAGACCAAGGTCCGTGCC
GATATCTTGCCAGATGGACTGCTTATTGCCATTGCTGGTTTGTTTGTATC
ACCGTCCGTCCTGTTTACAGCGGTCTCGTGTATTTGCTAGCGCTCCACCT
CGATGACATCGTGCCAGGTGTAAAATACAGGACATGCCTTAAAATCTCGA
TGACAAGCCAGTTTTCCTGAATCCGTTCTCACCAATTCCCTTCCTGCAGG
AAATGATCAAGAAGGCATTCGGAGGTATTCTGCTGGTCGACGAGGCGTAC
TACCTGTACAACGCGGCGAACGACAAAGACTACGGTCAGGAGTCGATCGA
GATCCTCCTCAACGTCATGGAGGAGCAGAAGGACGACCTCATCGTCACTC
TCGCCGGGTGCGCTCATCGTCTTTTTGGGATTGCACGAGATTCTGAGTAT
GGCAAAGTTGATGCAGGCATATGGCCAGATCCCGGCCCTTTCAGCACATG
AGTCCTGCGTAGCTGTTTGTGTAGCATTCCACCTTAAGAGAGCAGGCGAT
GCGCATGGTGTTCAGGTTCAATGTTGGTGTTTCAAACGTGTCCCTTTGCC
TTGATTGACATTGCAGATACAAGGACCGCATGGACCGCTTCTTCTCCTAC
ATCCCGGGTATGTCGAGCCGTATCGGAAACCACATCGACTTCCCCAACTA
TTTGGTCGACGAGCTGGTAGAGATCGCGATGGTGATGGCCAGGGACCTCC
AGTACTTCATGGACGACGCGTAAGTGTTCTGTTCCTTGCGTATTCGGTGT
CTTGTCTTGCGCGAAGTATCAACCGTGTCATGTCGCCTCAATGGTGCCCA
TTACTTGTTCTCGTGGCAGTGGACGGCAACTTAGTGGGGCCTTGAGTCAA
GAGTGTGTTTCGTAGGTCTTTTTCGTTTCGAGTTGTTTGTACCAGGGCGT
TCCTCGGAACATAATGAAATAGTGCGTCATCACGGAAATCCATATTGACC
TCTATTATAGACGAACTTCCTGCGGATTGATGGTTCACAAGCTTTCAGCA
TTTGCAATCTTGATGCTCGCGTGCGTCTAGGGCTGTTTTTTGCGGTTCTC
AGCCCCTGGACCTCGCCTCGCGGCGAGACGTACATGTACCGATAGCTCTG
AATTGCGAGGGCCCTCCCGCTGTGCCGCGCGCTCTCGTAGCGGACGTCGC
GCAGCGCTAGTGAGGGCCGAAGTCGCGTCTCCGAGATCTATGACGTCTCG
CCCAATCAGTCCAGGCCACATTAATTACATTGCTAAGAGAGTGGCGTGGT
ACTTTTTTGTGCGCTGGCTACAGTATTCACACCCTTGCCACACCCGACAA
CCAAGCAACCAAGTCTCCGCATGCCCAACTGCTGTGGTGCGTTTCCCTTT
CGATCCCGACGACAGGCGGGGTGGGTTGCGCCTGGTGTCGTGCGCAGAGC
AGTCTGGAAACTCCACCTCAATACAGCAGTAGTGCTTACTACGACTGGGT
GACTGGGTCGAACATGGTGGTCTCCATGTCAGAATGTCATTTTTCAGACC
CGCAGACACGTGACATCGCCATACAGCCTGTGCGAGACGGCGACCGCGAA
GCGCCCTTGTATTTTTTACTTCTCCCCACTTTTACCTCGGCATGTACCTG
AACTCTCGTTGCTGTCCGAATTGATTCGCCCGCGTTCTCACACAGGGCCC
TCGCGGTTTTCAAGGAATACATCGAGACCCGCATGAAGTTCCCTTTCTTC
TCCAACGCGCGAACTGTGAGTGCTGAGCACGCTGAGAGGCTTAGGGTTGC
ACGTCTTGAGTTGTACCTGTGGTGAAGGTTTTCCTAGAGAAAAGCTAAGG
TGTTTGACGTACTTTGTCGTTCATGACATGTCGATTTGGCACCTTGCAGC
GCGCGTCCTCTTGAAGTACCAACTAACGCGTTCGTGTTGTGTGCGGCGGT
TCCTTCCACAGGTCCGTAACGCCATGGACCGTGCTCGCATGAACTCTGCA
ATCCGCGTTTTCAACAACGCTGTAATGTCTGAAGGCGACGGAGGCATGGT
TTCCGAGAAGGTAAGGTAACCCGTGTGGAGGTCTTATCTGCACGTGTCGA
ACGTGTCGTTGTGTGGTAATAATTCACCTGGTCGTCCTAGCGTTATCTAC
CGTGTAGGGGTAAACGTATTCTTGCAGCAGATGAACCCCCGTTCCCTTCG
CCGATGAACAGTCTGTACCACTCATGCATAGGGATTGATTGCTCCACGGT
TTCCACCCAGAACGTTAAATATGCGAGCACGCAAACGAAACATAAAATTC
ATGCTACAGCATTTCAAAGAAGATTGATGTGCCGCTGCCCAAGTACAATA
AACGTAATCCGCGGAAGTACTCTTTCGCGGTTCAGATCTCGGTTATACAC
GTGCGCGGTTGTGGTGACCTATGGCGTAAGGCAAGTGCTTTCGCCAAGTT
GCAATGCCAAATGATGATGACATGCTTGACTTGGGTGTATTCGGGTGGCT
TGTGTTGTTTTAGATTTGGCTTCGTTAGAATCACTGCAGATGCTGCCTCA
GATGCAGCGCATAAGATTTTGGCATTTTCTAGTGAAGAGAGACGTACATA
GGGGCGCTCTAACCCCCCTTCAGAGTTTCCTCGTCCTTCTTGGCGGTTGC
TCGATCTGCGCTTACATGGTGCGTCGGCGAGCGTGCATGTACTGATGTCT
CGAACCCCCGCCGTGCCGTGTGTGATGCTCTCCTTCACTAGGACTTGGCT
GTGATCTGCGACGCGGATTTCCAAGTTCTACTTGACGAGCTCTTGGCGTA
CGAGGCCATTGGCAAGCTCGACGCTATCGTTGCCTAAGATAATTAAACGT
ACGATGCTGCGAGCTTGTAGAATGTGCCAGGATCAGAGCATAGCTACT back to topCoding sequence (CDS) from alignment at Scaffold_491:467360..472657+ >EsuBft925_11a-0001 ID=EsuBft925_11a-0001|Name=EsuBft925_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1368bp|location=Sequence derived from alignment at Scaffold_491:467360..472657+ (Ectocarpus subulatus male Bft15b) ATGAAGGCAGCAGCGATGATCGCGCTCGCCATGTGCGGAGCTACGGGAAC GGCCGCGTTCCAGATCCCGGTTTTCACTCGTCCAGCAACGGGCGCATCAA GCCGCAGCGCGCTCTCGATGGCGCAGCCCACGGTCGGGACCGGGACGGGC AAGGGTCTCCAGTACAATCCGGAGAAGTATACCGACGAGAAGAACGCGAA AAACTACCGGAAACTGTCCGAAGCGCTAGAGGTGTGGAAAAAAAGATGTG TGTACATGCACGTGGTGGCTGCGGATGTGGAGGCTCGCTTGGCCGAGGAG GCGGCAGACCAGAGGGCGAGGGCGGGCGAGATCCGCCGAGAAGCGAGGAT GGCCAAAATTAAGTTCATGGAGGACATGCCCGACAACACAGAGGCGAGGG CATGGTTTTCACAGCAGTTGGGAGTTGATGCACGATTCGAGGATGCAAAA GTGGGTACCGTGGAAGAGTTCATGTTCAAGGAGGGCGTGCGGGACATCCT CGAGAAGCTGGACTCGGACCTTGTGGGGCTGATTCCCGTTAAGCTGAGAG TGCGCCAAATCGCCGCCCTGCTGGTGCTTGACAAGATGCGCGGCAAGCTG GGCTTCGACACGTCCGTGCCTTCCCTCCACATGTGCTTCACGGGCGCCCC CGGCACGGGTAAGACCACCGTTGCCCTTCGCATGGGGCAAATCTTGCAGC GTATGGGCTACTGCCGACAGGGGCACGTCGTGGTGGCAACGAGGGACGAC CTGGTGGGCCAGTACGTTGGCCACACCGCCCCCAAGACCAAGGAAATGAT CAAGAAGGCATTCGGAGGTATTCTGCTGGTCGACGAGGCGTACTACCTGT ACAACGCGGCGAACGACAAAGACTACGGTCAGGAGTCGATCGAGATCCTC CTCAACGTCATGGAGGAGCAGAAGGACGACCTCATCGTCACTCTCGCCGG ATACAAGGACCGCATGGACCGCTTCTTCTCCTACATCCCGGGTATGTCGA GCCGTATCGGAAACCACATCGACTTCCCCAACTATTTGGTCGACGAGCTG GTAGAGATCGCGATGGTGATGGCCAGGGACCTCCAGTACTTCATGGACGA CGCGGCCCTCGCGGTTTTCAAGGAATACATCGAGACCCGCATGAAGTTCC CTTTCTTCTCCAACGCGCGAACTGTCCGTAACGCCATGGACCGTGCTCGC ATGAACTCTGCAATCCGCGTTTTCAACAACGCTGTAATGTCTGAAGGCGA CGGAGGCATGGTTTCCGAGAAGGACTTGGCTGTGATCTGCGACGCGGATT TCCAAGTTCTACTTGACGAGCTCTTGGCGTACGAGGCCATTGGCAAGCTC GACGCTATCGTTGCCTAA back to top
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