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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft712_9 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 41 |
| Hectar predicted targeting category | other localisation |
| Evalue | 9.4e-25 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft712_9a-0001 ID=EsuBft712_9a-0001|Name=EsuBft712_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=411bp|location=Sequence derived from alignment at Scaffold_548:215883..216293+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTCACCCCATCGGGATTCGAACTCACGACCTCTGCGACCAGCGGAT
TACGAGGATACCACTAGACCACCGGGCCGTGGGAGTAGAGATGGCAAAAG
ACTGCTCGTGGAATGCAGACATGTCCAAGGTGGCGGAAAAGGGCAAAGCA
CGAGCAGGGAAGTTGCACCCAATACTCGCAAACCGGCATCTCGATACACG
CATCAAATTGACGGTTTTGAAGAGCGTAATCGTACCGCCGCTAGATTACG
CTGGAGCAGTATGGGAAGGAAATAAGAACGTAGGGAAAGAATTAGAGGCG
GTGCAGATGAAAGTGAGGAAAAATTTCCTAGGATGCTCCAAGCGCACAAG
GCCGTCAGGGCAGAATTGGGGATCCAATCCTTACGGTCGGGAAGAGACAC
GAGGAAACTGA back to topprotein sequence of EsuBft712_9a-0001 >EsuBft712_9 ID=EsuBft712_9|Name=EsuBft712_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=136bp
MFHPIGIRTHDLCDQRITRIPLDHRAVGVEMAKDCSWNADMSKVAEKGKA
RAGKLHPILANRHLDTRIKLTVLKSVIVPPLDYAGAVWEGNKNVGKELEA
VQMKVRKNFLGCSKRTRPSGQNWGSNPYGREETRGN back to topmRNA from alignment at Scaffold_548:215883..216293+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft712_9a-0001 ID=EsuBft712_9a-0001|Name=EsuBft712_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=411bp|location=Sequence derived from alignment at Scaffold_548:215883..216293+ (Ectocarpus subulatus male Bft15b)
ATGTTTCACCCCATCGGGATTCGAACTCACGACCTCTGCGACCAGCGGAT
TACGAGGATACCACTAGACCACCGGGCCGTGGGAGTAGAGATGGCAAAAG
ACTGCTCGTGGAATGCAGACATGTCCAAGGTGGCGGAAAAGGGCAAAGCA
CGAGCAGGGAAGTTGCACCCAATACTCGCAAACCGGCATCTCGATACACG
CATCAAATTGACGGTTTTGAAGAGCGTAATCGTACCGCCGCTAGATTACG
CTGGAGCAGTATGGGAAGGAAATAAGAACGTAGGGAAAGAATTAGAGGCG
GTGCAGATGAAAGTGAGGAAAAATTTCCTAGGATGCTCCAAGCGCACAAG
GCCGTCAGGGCAGAATTGGGGATCCAATCCTTACGGTCGGGAAGAGACAC
GAGGAAACTGA back to topCoding sequence (CDS) from alignment at Scaffold_548:215883..216293+ >EsuBft712_9a-0001 ID=EsuBft712_9a-0001|Name=EsuBft712_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=411bp|location=Sequence derived from alignment at Scaffold_548:215883..216293+ (Ectocarpus subulatus male Bft15b)
ATGTTTCACCCCATCGGGATTCGAACTCACGACCTCTGCGACCAGCGGAT
TACGAGGATACCACTAGACCACCGGGCCGTGGGAGTAGAGATGGCAAAAG
ACTGCTCGTGGAATGCAGACATGTCCAAGGTGGCGGAAAAGGGCAAAGCA
CGAGCAGGGAAGTTGCACCCAATACTCGCAAACCGGCATCTCGATACACG
CATCAAATTGACGGTTTTGAAGAGCGTAATCGTACCGCCGCTAGATTACG
CTGGAGCAGTATGGGAAGGAAATAAGAACGTAGGGAAAGAATTAGAGGCG
GTGCAGATGAAAGTGAGGAAAAATTTCCTAGGATGCTCCAAGCGCACAAG
GCCGTCAGGGCAGAATTGGGGATCCAATCCTTACGGTCGGGAAGAGACAC
GAGGAAACTGA back to top
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