Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft663_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 417 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-26_004920.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft663_3a-0001 ID=EsuBft663_3a-0001|Name=EsuBft663_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4174bp|location=Sequence derived from alignment at Scaffold_189:104365..109190+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGGAGGTGCGGCGGCGCCGTTCCCTGCTAGTGGCGATGGTCTCCAGCA
GCCGGGGTGGGGGGTGGGCGGGGCACAATCGGTCATGGGTTGGGGTGGGG
CTGCTGCTGCTGCGGCGGCGGCGGCGGTGGCGAGCGCCGCTCAAGGGCCT
CAGCAACAGCAGCATCCGGCCATGTTCCTTCCGGGCGCGGCGCCGATTGC
GGGAGGGTGGCACGGCGCCGGCGGCTTGATGCCGACAGGCGAAGCGGAGG
AGGAGGAGGAGGAGGAGGAGGGATGACGGCCCGCCTGGTAACGGGCCCGC
AGACTCCTCCCGCCGCCACCGCCGGCGGCCTCTAACGATCGAACATAGAA
GCAACAAACAGGTCAGATCAGAACAGGTCAGGGCAGCCTTCGTTCCACTA
AGGAACGTGGCCACGAGGATGGGAGTGGAGGGGAGGGAAGCACAGCAAGC
GGCTGGCTGAGATTGCACCATGGGTGTCGAACGGCATGATGGCAGGGCGG
GGGAGAGGAGGGGGGCGGTCGATCAACCTGTGCGCAACACACTTTTTTCG
ATGACTACTTGCAGCAGGCCGCGGAAACTTTCGATTGGAGTTCTTTCTTG
GTTTAAACAATTTTGTCTTGTCTGGTTCTGGTTCTTTTTGTTCTCTGGTT
GTTCTTGTATGGCGTGTCCGTTTTTTGGGGTCTTGTCGCTCTCCCCCCTT
TTCCTTCCCAAGGCATTCCATGCTCTTGATAGCGTGAGCCCCACTTCCGT
TTCTAGCCCTACCTGCAGCGGGAGCCCCACTCCCCTGCCCCCAACCTCTA
CTGTAGCTTTTGTTGACAGGGACCCTGTCTGTTGACGGGTCAAAGTCGTA
CACTTGACTCCTCTCGTGTCGAGGTCGAAGCCCCGCTCCTCTTTCCTTCG
AATCTTCGTGCCCGAACCCCTTCACTTGCCCTTCAATACCGTCGGGCAGG
GTACACGTCGTGTTTTTTTTTTTCCGTGCCCCCGGGGGGGGGGGGAGGTT
CATGAGCGGGGCAGGCGTTTTCACATGCGTGTGGCGTAGATACCTTGGCG
CCTTTTTCGCGAAGATGGTGCTGGCGGCGCTTTGCCCGAAGGGTCAGTGC
TAGTGTTTGCTCGCGAAACTAGATAGCGTCGGGTGCGGGAGGGGGGGGGG
GGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGCGGTGTCGGCAACGACGGTGTCACTGCTGTCAAATTGTGGTAT
AGGCCTTGGCTCGCCTGCAGACTTGTTCGTGGTGTTGTAGGGATCGGCGG
AGGTTCTTGCTCTTTTTGCACGAACGGGCTGTGGCCGGGGGGTTCCCCCA
CACACCTCACCCGAGGGAGGGGGGGGGGTTACTGGTTGTCGTGTGCGCCG
GGCTAGCGGTTTTCACGAGCTCGCGTCTCCGCGCGCTCGCCGCAGGTCCT
CTCGACCTCTCGACCCAGTCCTCTCGACGTAGCGTTTCCTCTTGATGGAT
GTTGTGGCTTTGTTTCCTGTGCGAACGGAGTGCTAGGAGTCACCGGTCGC
CGGTGTGTGGCGCGACTGGCTGTCTGGAGAGCGGGGGCCCGCACCATGCA
GTGCTTGTTGTCGTTGTTCTTGCTGTGTGTCGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTGTTATTGTTTTTTGTGTT
GGGATGCTCGCCCACGAACGTCTCAGCCGATGCTGCGCAACCCTGTCGTC
GTGGGAGCAAAAGTGGGGAGGTTGAGCGGGTGATGAGAACGAAAAGAGGA
CACTCTTGAAAATGGGTTTTGCTGTAGGCGTCTTGTACTTGTGTTGTGCG
GAGTACCGTCGTACGTGCATTTGTTTTTGGCGCTGCTTGCTAGACCCCAG
AGATCACAGACACGTTTCTTTCTATGCACGACAGGATGGGACACGCCGGA
GGGACTGAGAGGAGGGGGAAGGATTGTCCCGGTTGCCTTCAGTTTTTCTG
TGGTGTCGGGGGTGGGCGTTGCGGACGGTGATTGTGGTGGTGGGACTTTT
ATGAAGACTTTGTTACGTGGTGGTGAGTTGTTTCGCTATTTCTTTAAGTC
CTCTCGCCCTCTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT
GTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTGCCTGCAAAGGTTGGCAGACTGTGGCGCTG
ACGGCAGTTTTTTTCTTCGTATTTTGTTTCCTCTCTGATCGCTCACACCA
GGGGGGACATTTCGCTGTTTTCTCGCTGTCCCTTCGCACCCCCCTTCCCC
CCTCCCATTTGTGTCCCTTTTTCGGGTGTAACCGTTGTTTCCCTTTGGGA
GATGTAGAAAAAATATGCATGGTGTTCTTTGTTCCTCTGTGTCTGTCTGC
ACTCCCATTAGGGGAATGAACGGCTATGAGCGGCCGTGGTTGAAACGGAG
AAGGAGAGGATGCCATCATGTATCCGGCGTCATTTTATCGTGCAATCAAT
CCCTTGCGCCTTGCAAGATATAAACACTTAGTTCGTCATCGTGGTGGACA
GCAGGCGTCGAGCAAAAAACTAATGGGGGTCGACGTGTGAGAGGAGGAGG
ATGGTACGGGTGTGACCAATTACCGCCGCCTGCCGAATGATATCAGTCTA
TGGGTAGAGCTGGAGTAGGAGCAGTAGCAGACTTGATGTTCCGTAAGGGT
TGGAACTCTTGCATCTTTACCAACTTACAGTAGTAATCGGTGGTGTTGGT
TCTTTGTTTCGATTTTTTTGTTTCGATTTTTTTGTTTCGATTTTTTTTCA
GTAGCACTCATTTCTTTCTTCTCTTTTCTTTTTTTTTTGTGGACAAGCAG
CGCGCGGCGTTGTTTGTCGTTTCTCCTAGTAGAACTTTTTTTTTTCAATA
GTTTTCTTCGGTTTGTTTCTGCGCTTTTTTTTTTGTATTGTGATGGACAT
AAGACGACAGGGCGAGTGGTGAGTGGATGGCGAAGCGGGTTCATTACAGG
CGAGAAAATAGACTACATAGAGAAACAGACCGGGACAAAGAAGGGGCGTC
GAGTGTTGAGTGGCCTTCGCTGATCTCGCTGGCAGGTTTCCTGCTTGAAG
GCCTGACGCACACGCGTCGCGTGTGCATATATGTATGACGGAGGATGGAG
TTTAGTTAGAGAGGTTCACGGAACGGGGGGGGGGGGNNNNNNNNNGAGGG
GGGGGGGGGGTGCAGCCGGCGGATTTTTTGTGTGCTGACCCTCCGATGGT
CTTTATCACCTGTCTTCAGCCTACGTGTGATTTTTCCTCGGTAGAATGTT
CTTTTTTTACAGCACCGCCATTTTTTGTACAGGGCCCGGGCCGGCCCTAC
GCAGAGGCAGCAGCAGCACCACCACGTGACACTTTAGGTGAATGCTGTTG
TTCTCTCCCTGCCTCAAGAAACAGCTCCAGCATGCCGAACAACGTTTGAG
GGAGGGAAAACCTTGTATGCGTGCATGTGCGCTTTTGGTGATGGCCGTTT
TGGTCGTCGGAGTAGAAGAAGACAGTTGGGGAAAACCGGGGGGTCATCTG
CACAAAATGCTGGTTGTGTGTAGCTGTCATGTGTTTTTGGTGTGCGGGCC
GGCCTTTTGTAGGTTTGGTTTCGACTTGAATATTCGGTTGTTGCAATAGG
GTGGACGGTTGGTTGTGAATCGGTATTTTGGAGGCCTGGCGTGCGTTCTG
TTCTTTTATGGACTGGTGTTCAACGGGGGGGGGTCCAAAACGATACGTGG
TAACAAGATTAATACCTGGCCGCCTTATATTGTCATGTTTTTTTCTTCAG
TTTTCTGTTCTGTTCTATGTATACTGTACTCGGTATGATCTTGGTCGTCG
GTCGTTCATTCTCTATGCTGTTCCTGCTGGAGAAGGTGAAAGTGAAACCG
TCGGGCGTTTTCGCATGTTACAACGAACGTGTACCTTTTTTTTTTTTTGT
CGTTTCGTCTTGCTGTGTTGGGCTGGTCAGTGCTTCGGTGTTCAGCTTTA
CGTAGCACACATAAGCCATTCGGGGTGTTGCGGTCGGTTGGTTTTCGAAG
GCTGCTCTTGTTTCTCATGTTGTG back to topprotein sequence of EsuBft663_3a-0001 >EsuBft663_3 ID=EsuBft663_3|Name=EsuBft663_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=91bp
MGGAAAPFPASGDGLQQPGWGVGGAQSVMGWGGAAAAAAAAAVASAAQGP
QQQQHPAMFLPGAAPIAGGWHGAGGLMPTGEAEEEEEEEEG back to topmRNA from alignment at Scaffold_189:104365..109190+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft663_3a-0001 ID=EsuBft663_3a-0001|Name=EsuBft663_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4826bp|location=Sequence derived from alignment at Scaffold_189:104365..109190+ (Ectocarpus subulatus male Bft15b)
ATGGGAGGTGCGGCGGCGCCGTTCCCTGCTAGTGGCGATGGTCTCCAGCA
GCCGGGGTGGGGGGTGGGCGGGGCACAATCGGTCATGGGTTGGGGTGGGG
CTGCTGCTGCTGCGGCGGCGGCGGCGGTGGCGAGCGCCGCTCAAGGGCCT
CAGCAACAGCAGCATCCGGCCATGTTCCTTCCGGGCGCGGCGCCGATTGC
GGGAGGGTGGCACGGCGCCGGCGGCTTGATGCCGACAGGCGAAGCGGAGG
AGGAGGAGGAGGAGGAGGAGGGATGACGGCCCGCCTGGTAACGGGCCCGC
AGACTCCTCCCGCCGCCACCGCCGGCGGCCTCTAACGATCGAACATAGAA
GCAACAAACAGGTCAGATCAGAACAGGTCAGGGCAGCCTTCGTTCCACTA
AGGAACGTGGCCACGAGGATGGGAGTGGAGGGGAGGGAAGCACAGCAAGC
GGCTGGCTGAGATTGCACCATGGGTGTCGAACGGCATGATGGCAGGGCGG
GGGAGAGGAGGGGGGCGGTCGATCAACCTGTGCGCAACACACTTTTTTCG
ATGACTACTTGCAGCAGGCCGCGGAAACTTTCGATTGGAGTTCTTTCTTG
GTTTAAACAATTTTGTCTTGTCTGGTTCTGGTTCTTTTTGTTCTCTGGTT
GTTCTTGTATGGCGTGTCCGTTTTTTGGGGTCTTGTCGCTCTCCCCCCTT
TTCCTTCCCAAGGCATTCCATGCTCTTGATAGCGTGAGCCCCACTTCCGT
TTCTAGCCCTACCTGCAGCGGGAGCCCCACTCCCCTGCCCCCAACCTCTA
CTGTAGCTTTTGTTGACAGGGACCCTGTCTGTTGACGGGTCAAAGTCGTA
CACTTGACTCCTCTCGTGTCGAGGTACTTTTTTCTGTTCCCGCCGCACCT
GGTGCGTGCTAGTCCCCCCCCCCCCCCTTTTGCTTCTCGCATTTTCACCA
CGGCTGTGTTGCCTTCGCTGCTTTTCACAAGACGAACGTGCTGCCGCGAA
GGAAAAAAAAAAGAAGTGATTGGTGTTCGTTTCTTGCGGCAGGTCGAAGC
CCCGCTCCTCTTTCCTTCGAATCTTCGTGCCCGAACCCCTTCACTTGCCC
TTCAATACCGTCGGGCAGGGTACACGTCGTGTTTTTTTTTTTCCGTGCCC
CCGGGGGGGGGGGGAGGTTAGTGCAGTAGCCACAGCGCAACGTCGCCGGT
CATGATTGGTGTGATGTGTGCTCCCCAGAAACGGGGCCTGTTCGCGCGGA
AGCCGAGAATGTGGGCGGCGGGCCAGCGAAACAGGTTCATGAGCGGGGCA
GGCGTTTTCACATGCGTGTGGCGTAGATACCTTGGCGCCTTTTTCGCGAA
GATGGTGCTGGCGGCGCTTTGCCCGAAGGGTCAGTGCTAGTGTTTGCTCG
CGAAACTAGATAGCGTCGGGTGCGGGAGGGGGGGGGGGGGGGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGTGT
CGGCAACGACGGTGTCACTGCTGTCAAATTGTGGTATAGGCCTTGGCTCG
CCTGCAGACTTGTTCGTGGTGTTGTAGGGATCGGCGGAGGTTCTTGCTCT
TTTTGCACGAACGGGCTGTGGCCGGGGGGTTCCCCCACACACCTCACCCG
AGGGAGGGGGGGGGGTTACTGGTTGTCGTGTGCGCCGGGCTAGCGGTTTT
CACGAGCTCGCGTCTCCGCGCGCTCGCCGCAGGTCCTCTCGACCTCTCGA
CCCAGTCCTCTCGACGTAGCGTTTCCTCTTGATGGATGTTGTGGCTTTGT
TTCCTGTGCGAACGGAGTGCTAGGAGTCACCGGTCGCCGGTGTGTGGCGC
GACTGGCTGTCTGGAGAGCGGGGGCCCGCACCATGCAGTGCTTGTTGTCG
TTGTTCTTGCTGTGTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGCTGTTGTTATTGTTTTTTGTGTTGGGATGCTCGCCC
ACGAACGTCTCAGCCGATGCTGCGCAACCCTGTCGTCGTGGGAGCAAAAG
TGGGGAGGTTGAGCGGGTGATGAGAACGAAAAGAGGACACTCTTGAAAAT
GGGTTTTGCTGTAGGCGTCTTGTACTTGTGTTGTGCGGAGTACCGTCGTA
CGTGCATTTGTTTTTGGCGCTGCTTGCTAGACCCCAGAGATCACAGACAC
GTTTCTTTCTATGCACGACAGGATGGGACACGCCGGAGGGACTGAGAGGA
GGGGGAAGGATTGTCCCGGTTGCCTTCAGTTTTTCTGTGGTGTCGGGGGT
GGGCGTTGCGGACGGTGATTGTGGTGGTGGGACTTTTATGAAGACTTTGT
TACGTGGTGGTGAGTTGTTTCGCTATTTCTTTAAGTCCTCTCGCCCTCTC
TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG
TCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTGCCTGCAAAGGTTGGCAGACTGTGGCGCTGACGGCAGTTTTTT
TCTTCGTATTTTGTTTCCTCTCTGATCGCTCACACCAGGGGGGACATTTC
GCTGTTTTCTCGCTGTCCCTTCGCACCCCCCTTCCCCCCTCCCATTTGTG
TCCCTTTTTCGGGTGTAACCGTTGTTTCCCTTTGGGAGATGTAGAAAAAA
TATGCATGGTGTTCTTTGTTCCTCTGTGTCTGTCTGCACTCCCATTAGGG
GAATGAACGGCTATGAGCGGCCGTGGTTGAAACGGAGAAGGAGAGGATGC
CATCATGTATCCGGCGTCATTTTATCGTGCAATCAATCCCTTGCGCCTTG
CAAGATATAAACACTTAGTTCGTCATCGTGGTGGACAGCAGGCGTCGAGC
AAAAAACTAATGGGGGTCGACGTGTGAGAGGAGGAGGATGGTACGGGTGT
GTTGTGTGGGTTCCGTGGGGTACGGGGTTGCTGTCGACAGCTCCAGCCGG
AGCCCCAACGAAAACGGTTGACGGGTTGTCCTTTCGAGAGAATTGTTGGC
GTTGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNGGGGCGACGTGCTCT
CCCGTGCGGTAATCGATCTGACGGAGGGTGGCGGTGCGCGATGCACGACT
TGTGGCAAGCCCGGCGCCGCAGACGTGTTTCGTCGTCGTCGATGGTTGCT
TGCCCTCTGGTTTGTTGGGGCGCTTGCTTGTTGTTGGTTGGTTGGAAGCC
CCGCCGCCTATGGCGTGGGGAGACCGGCGGTGATGGGCGCTGATTTTATA
AGGCCCGACAGGTGTGACCAATTACCGCCGCCTGCCGAATGATATCAGTC
TATGGGTAGAGCTGGAGTAGGAGCAGTAGCAGACTTGATGTTCCGTAAGG
GTTGGAACTCTTGCATCTTTACCAACTTACAGTAGTAATCGGTGGTGTTG
GTTCTTTGTTTCGATTTTTTTGTTTCGATTTTTTTGTTTCGATTTTTTTT
CAGTAGCACTCATTTCTTTCTTCTCTTTTCTTTTTTTTTTGTGGACAAGC
AGCGCGCGGCGTTGTTTGTCGTTTCTCCTAGTAGAACTTTTTTTTTTCAA
TAGTTTTCTTCGGTTTGTTTCTGCGCTTTTTTTTTTGTATTGTGATGGAC
ATAAGACGACAGGGCGAGTGGTGAGTGGATGGCGAAGCGGGTTCATTACA
GGCGAGAAAATAGACTACATAGAGAAACAGACCGGGACAAAGAAGGGGCG
TCGAGTGTTGAGTGGCCTTCGCTGATCTCGCTGGCAGGTTTCCTGCTTGA
AGGCCTGACGCACACGCGTCGCGTGTGCATATATGTATGACGGAGGATGG
AGTTTAGTTAGAGAGGTTCACGGAACGGGGGGGGGGGGNNNNNNNNNGAG
GGGGGGGGGGGGTGCAGCCGGCGGATTTTTTGTGTGCTGACCCTCCGATG
GTCTTTATCACCTGTCTTCAGCCTACGTGTGATTTTTCCTCGGTAGAATG
TTCTTTTTTTACAGCACCGCCATTTTTTGTACAGGGCCCGGGCCGGCCCT
ACGCAGAGGCAGCAGCAGCACCACCACGTGACACTTTAGGTGAATGCTGT
TGTTCTCTCCCTGCCTCAAGAAACAGCTCCAGCATGCCGAACAACGTTTG
AGGGAGGGAAAACCTTGTATGCGTGCATGTGCGCTTTTGGTGATGGCCGT
TTTGGTCGTCGGAGTAGAAGAAGACAGTTGGGGAAAACCGGGGGGTCATC
TGCACAAAATGCTGGTTGTGTGTAGCTGTCATGTGTTTTTGGTGTGCGGG
CCGGCCTTTTGTAGGTTTGGTTTCGACTTGAATATTCGGTTGTTGCAATA
GGGTGGACGGTTGGTTGTGAATCGGTATTTTGGAGGCCTGGCGTGCGTTC
TGTTCTTTTATGGACTGGTGTTCAACGGGGGGGGGTCCAAAACGATACGT
GGTAACAAGATTAATACCTGGCCGCCTTATATTGTCATGTTTTTTTCTTC
AGTTTTCTGTTCTGTTCTATGTATACTGTACTCGGTATGATCTTGGTCGT
CGGTCGTTCATTCTCTATGCTGTTCCTGCTGGAGAAGGTGAAAGTGAAAC
CGTCGGGCGTTTTCGCATGTTACAACGAACGTGTACCTTTTTTTTTTTTT
GTCGTTTCGTCTTGCTGTGTTGGGCTGGTCAGTGCTTCGGTGTTCAGCTT
TACGTAGCACACATAAGCCATTCGGGGTGTTGCGGTCGGTTGGTTTTCGA
AGGCTGCTCTTGTTTCTCATGTTGTG back to topCoding sequence (CDS) from alignment at Scaffold_189:104365..109190+ >EsuBft663_3a-0001 ID=EsuBft663_3a-0001|Name=EsuBft663_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=276bp|location=Sequence derived from alignment at Scaffold_189:104365..109190+ (Ectocarpus subulatus male Bft15b)
ATGGGAGGTGCGGCGGCGCCGTTCCCTGCTAGTGGCGATGGTCTCCAGCA
GCCGGGGTGGGGGGTGGGCGGGGCACAATCGGTCATGGGTTGGGGTGGGG
CTGCTGCTGCTGCGGCGGCGGCGGCGGTGGCGAGCGCCGCTCAAGGGCCT
CAGCAACAGCAGCATCCGGCCATGTTCCTTCCGGGCGCGGCGCCGATTGC
GGGAGGGTGGCACGGCGCCGGCGGCTTGATGCCGACAGGCGAAGCGGAGG
AGGAGGAGGAGGAGGAGGAGGGATGA back to top
|