Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft663_13 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 169 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | SANT/Myb domain transcription factor |
| Ec32 ortholog | Ec-26_004820.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft663_13a-0001 ID=EsuBft663_13a-0001|Name=EsuBft663_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1692bp|location=Sequence derived from alignment at Scaffold_189:202546..204284+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGACGCAACGTCCGACGGATTAACCGGGAGGTGAACGCCGGCCAGAA
TCCGCCGTTCCGCAAAAGGCGGGGCAAAGACTCGGAGGCAGATACGGCCG
GCGGCACCAAAAAGAGGAAGGCCGCGTCTTTGAAGGAGCTCAAGCGCTTC
TACGACGCGGCCGTCGACGCCGCGAGCGAGGTGTTGTCGACCGCCACCGC
CACCACAAGCGGAAGCGTGCAAGGCACCGGAGGCGCAACGGTCACCGGGA
AGGGGGGAAACATCATTACTACTACCCCTGCCCTTGCCGGGCACCCACTT
CTGCCCGCCGACTCGTCAGCGTCCATGTCAAGCCCCCGGCCCCGTGCCAC
TCGCTCCGATGACGATTGCCGTGGCGATCAGCGTCTCGGATTGCTCGCGG
CGAGTGCCTCTCCCGGCAATCCACCACCGATGGCACCGTTTCCGCCGCGG
CCGTCCCTCTTGCTGACTGGCGAAGGAAGGACTGCTGCTGCTGCCACTGC
TGCTGCTGCTGCGGCGGCGGCGGCGGCGGCGGCGGCGGTAGGGACTATTG
TGCAGAATAACACCGATGTCGTCAGTAGAAGCACTGCGTGGACTGCTCCC
GGCGGCGACGCTGCATTCGGCGACGCCTCGGGTCGTTTGGGAGGACGGCA
AGGGCAGCAGGAACGGAACGGCGGTATCCACGCCCATGGCCCCGGTGACG
GCCACCGTTCCTCCGAAGCTCCACCTCCAGACTCCGACGACAACTGCCGG
CGGCGTGGCTCGGCGGTCTCGGCGAGGACCCTGGTCGGAGGCTTCGTCGA
GCAATCCGTCCCGGAGTGCAGCGGAGGCGCTTTCCGGGAGGCCCTCCGCA
AGAAGTTGGAGGCCACCGGAGGCACGCACTGCAAGCTCGGTTCGACCAGA
AGGTTCAAACCCGCCGCCGCCGCCGCCGCCGCCGCTGTGGCAGCTGCGAC
GGTGGCCGACGCCGAGGGCGGCAACAATCGCCTTCGCCGTGCAGCGGGAG
GAGGAAAGAACCGCACCGCCGGCGCCAAAAGAAACGCCAACATAAACGAG
GGCGAGCTCAAGGACGTCGGTGGTTTCGATGTGGGAGACGGAGCCTCCGC
GCCGCGACCGTTCTCGGTTGGCTGCGGGGATGAGGGTCGCCGAAACAAAA
CGGGCTCGAGAAGGAGCTGTTCTGGTAATGAGGAAGGGAGACGACGAGGG
AAGAGAAAGGGATCGTCGTCGTCTTCGCTGCCACCGGCACTGTGGTCTTC
GTCGCCGCCGGCGCAGCCGTCGTCGTCGCCTGCGATAGGTCCATCCCTCT
TCACGCCGGCGCTCCCTCCCCCGGGCGAACGGTTGCCCCCGTCGACAGCC
TATTCCGCGCTGCCCGGGTTCAAGGGCACAACTCCGCGTCACAAGGACCC
GGCCGCAGGCTCAGCCGCCACCGCCGCCGCTGCCACCGCCGCCGCCATTT
CGGGCCTTCCTCTTCCACCCCGCCCGACGACGGCGTGGCACGCAAAGTCT
GCGCTCGTGCCTGGCGTGTCGCCGGTCTTACTCGAAGCGCTCAAAGAGTG
CGAAAAAGACGGAGATTGTGGTCTCCATCAATGCCACGCTGAGGCGGAGC
AGCTGCAGCACACCACCGCCTCCCCTGTGGCAGCGGCACCGTTCTCGGAA
TCGGGCGTCGACCAGCTCAAAACGCGGCGATGGAGGCAATAG back to topprotein sequence of EsuBft663_13a-0001 >EsuBft663_13 ID=EsuBft663_13|Name=EsuBft663_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=563bp
MRRNVRRINREVNAGQNPPFRKRRGKDSEADTAGGTKKRKAASLKELKRF
YDAAVDAASEVLSTATATTSGSVQGTGGATVTGKGGNIITTTPALAGHPL
LPADSSASMSSPRPRATRSDDDCRGDQRLGLLAASASPGNPPPMAPFPPR
PSLLLTGEGRTAAAATAAAAAAAAAAAAAVGTIVQNNTDVVSRSTAWTAP
GGDAAFGDASGRLGGRQGQQERNGGIHAHGPGDGHRSSEAPPPDSDDNCR
RRGSAVSARTLVGGFVEQSVPECSGGAFREALRKKLEATGGTHCKLGSTR
RFKPAAAAAAAAVAAATVADAEGGNNRLRRAAGGGKNRTAGAKRNANINE
GELKDVGGFDVGDGASAPRPFSVGCGDEGRRNKTGSRRSCSGNEEGRRRG
KRKGSSSSSLPPALWSSSPPAQPSSSPAIGPSLFTPALPPPGERLPPSTA
YSALPGFKGTTPRHKDPAAGSAATAAAATAAAISGLPLPPRPTTAWHAKS
ALVPGVSPVLLEALKECEKDGDCGLHQCHAEAEQLQHTTASPVAAAPFSE
SGVDQLKTRRWRQ back to topmRNA from alignment at Scaffold_189:202546..204284+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft663_13a-0001 ID=EsuBft663_13a-0001|Name=EsuBft663_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1739bp|location=Sequence derived from alignment at Scaffold_189:202546..204284+ (Ectocarpus subulatus male Bft15b)
ATGCGACGCAACGTCCGACGGATTAACCGGGAGGTGAACGCCGGCCAGAA
TCCGCCGTTCCGCAAAAGGCGGGGCAAAGACTCGGAGGCAGATACGGCCG
GCGGCACCAAAAAGAGGAAGGCCGCGTCTTTGAAGGAGCTCAAGCGCTTC
TACGACGCGGCCGTCGACGCCGCGAGCGAGGTGTTGTCGACCGCCACCGC
CACCACAAGCGGAAGCGTGCAAGGCACCGGAGGCGCAACGGTCACCGGGA
AGGGGGGAAACATCATTACTACTACCCCTGCCCTTGCCGGGCACCCACTT
CTGCCCGCCGACTCGTCAGCGTCCATGTCAAGCCCCCGGCCCCGTGCCAC
TCGCTCCGATGACGATTGCCGTGGCGATCAGCGTCTCGGATTGCTCGCGG
CGAGTGCCTCTCCCGGCAATCCACCACCGATGGCACCGTTTCCGCCGCGG
CCGTCCCTCTTGCTGACTGGCGAAGGAAGGACTGCTGCTGCTGCCACTGC
TGCTGCTGCTGCGGCGGCGGCGGCGGCGGCGGCGGCGGTAGGGACTATTG
TGCAGAATAACACCGATGTCGTCAGTAGAAGCACTGCGTGGACTGCTCCC
GGCGGCGACGCTGCATTCGGCGACGCCTCGGGTCGTTTGGGAGGACGGCA
AGGGCAGCAGGAACGGAACGGCGGTATCCACGCCCATGGCCCCGGTGACG
GCCACCGTTCCTCCGAAGCTCCACCTCCAGACTCCGACGACAACTGCCGG
CGGCGTGGCTCGGCGGTCTCGGCGAGGACCCTGGTCGGAGGCTTCGTCGA
GCAATCCGTCCCGGAGTGCAGCGGAGGCGCTTTCCGGGAGGCCCTCCGCA
AGAAGTTGGAGGCCACCGGAGGCACGCACTGCAAGCTCGGTTCGACCAGA
AGGTTCAAACCCGCCGCCGCCGCCGCCGCCGCCGCTGTGGCAGCTGCGAC
GGTGGCCGACGCCGAGGGCGGCAACAATCGCCTTCGCCGTGCAGCGGGAG
GAGGAAAGAACCGCACCGCCGGCGCCAAAAGAAACGCCAACATAAACGAG
GGCGAGCTCAAGGACGTCGGTGGTTTCGATGTGGGAGACGGAGCCTCCGC
GCCGCGACCGTTCTCGGTTGGCTGCGGGGATGAGGGTCGCCGAAACAAAA
CGGGCTCGAGAAGGAGCTGTTCTGGTAATGAGGAAGGGAGACGACGAGGG
AAGAGAAAGGGATCGTCGTCGTCTTCGCTGCCACCGGCACTGTGGTCTTC
GTCGCCGCCGGCGCAGCCGTCGTCGTCGCCTGCGATAGGTCCATCCCTCT
TCACGCCGGCGCTCCCTCCCCCGGGCGAACGGTTGCCCCCGTCGACAGCC
TATTCCGCGCTGCCCGGGTTCAAGGGCACAACTCCGCGTCACAAGGACCC
GGCCGCAGGCTCAGCCGCCACCGCCGCCGCTGCCACCGCCGCCGCCATTT
CGGGCCTTCCTCTTCCACCCCGCCCGACGACGGCGTGGCACGCAAAGTCT
GCGCTCGTGCCTGGCGTGTCGCCGGTCTTACTCGAAGCGCTCAAAGAGTG
CGAAAAAGACGGAGATTGTGGTCTCCATCAATGCCACGCTGAGGCGGAGC
AGCTGCAGCACACCACCGCCTCCCCTGTGGCAGCGGCACCGTTCTCGGAA
TCGGGCGTCGACCAGCTCAAAACGGTGCGCTCTCGACAAGTCTTTGCGGC
AGGGGCTGGGGCTGGGAATAGCGGCGATGGAGGCAATAG back to topCoding sequence (CDS) from alignment at Scaffold_189:202546..204284+ >EsuBft663_13a-0001 ID=EsuBft663_13a-0001|Name=EsuBft663_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1692bp|location=Sequence derived from alignment at Scaffold_189:202546..204284+ (Ectocarpus subulatus male Bft15b)
ATGCGACGCAACGTCCGACGGATTAACCGGGAGGTGAACGCCGGCCAGAA
TCCGCCGTTCCGCAAAAGGCGGGGCAAAGACTCGGAGGCAGATACGGCCG
GCGGCACCAAAAAGAGGAAGGCCGCGTCTTTGAAGGAGCTCAAGCGCTTC
TACGACGCGGCCGTCGACGCCGCGAGCGAGGTGTTGTCGACCGCCACCGC
CACCACAAGCGGAAGCGTGCAAGGCACCGGAGGCGCAACGGTCACCGGGA
AGGGGGGAAACATCATTACTACTACCCCTGCCCTTGCCGGGCACCCACTT
CTGCCCGCCGACTCGTCAGCGTCCATGTCAAGCCCCCGGCCCCGTGCCAC
TCGCTCCGATGACGATTGCCGTGGCGATCAGCGTCTCGGATTGCTCGCGG
CGAGTGCCTCTCCCGGCAATCCACCACCGATGGCACCGTTTCCGCCGCGG
CCGTCCCTCTTGCTGACTGGCGAAGGAAGGACTGCTGCTGCTGCCACTGC
TGCTGCTGCTGCGGCGGCGGCGGCGGCGGCGGCGGCGGTAGGGACTATTG
TGCAGAATAACACCGATGTCGTCAGTAGAAGCACTGCGTGGACTGCTCCC
GGCGGCGACGCTGCATTCGGCGACGCCTCGGGTCGTTTGGGAGGACGGCA
AGGGCAGCAGGAACGGAACGGCGGTATCCACGCCCATGGCCCCGGTGACG
GCCACCGTTCCTCCGAAGCTCCACCTCCAGACTCCGACGACAACTGCCGG
CGGCGTGGCTCGGCGGTCTCGGCGAGGACCCTGGTCGGAGGCTTCGTCGA
GCAATCCGTCCCGGAGTGCAGCGGAGGCGCTTTCCGGGAGGCCCTCCGCA
AGAAGTTGGAGGCCACCGGAGGCACGCACTGCAAGCTCGGTTCGACCAGA
AGGTTCAAACCCGCCGCCGCCGCCGCCGCCGCCGCTGTGGCAGCTGCGAC
GGTGGCCGACGCCGAGGGCGGCAACAATCGCCTTCGCCGTGCAGCGGGAG
GAGGAAAGAACCGCACCGCCGGCGCCAAAAGAAACGCCAACATAAACGAG
GGCGAGCTCAAGGACGTCGGTGGTTTCGATGTGGGAGACGGAGCCTCCGC
GCCGCGACCGTTCTCGGTTGGCTGCGGGGATGAGGGTCGCCGAAACAAAA
CGGGCTCGAGAAGGAGCTGTTCTGGTAATGAGGAAGGGAGACGACGAGGG
AAGAGAAAGGGATCGTCGTCGTCTTCGCTGCCACCGGCACTGTGGTCTTC
GTCGCCGCCGGCGCAGCCGTCGTCGTCGCCTGCGATAGGTCCATCCCTCT
TCACGCCGGCGCTCCCTCCCCCGGGCGAACGGTTGCCCCCGTCGACAGCC
TATTCCGCGCTGCCCGGGTTCAAGGGCACAACTCCGCGTCACAAGGACCC
GGCCGCAGGCTCAGCCGCCACCGCCGCCGCTGCCACCGCCGCCGCCATTT
CGGGCCTTCCTCTTCCACCCCGCCCGACGACGGCGTGGCACGCAAAGTCT
GCGCTCGTGCCTGGCGTGTCGCCGGTCTTACTCGAAGCGCTCAAAGAGTG
CGAAAAAGACGGAGATTGTGGTCTCCATCAATGCCACGCTGAGGCGGAGC
AGCTGCAGCACACCACCGCCTCCCCTGTGGCAGCGGCACCGTTCTCGGAA
TCGGGCGTCGACCAGCTCAAAACGCGGCGATGGAGGCAATAG back to top
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