Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft555_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 138 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft555_8a-0001 ID=EsuBft555_8a-0001|Name=EsuBft555_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1380bp|location=Sequence derived from alignment at Scaffold_581:96464..97843- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCCAAGGCATTCGAGGGGTGGTGGTCGAGGAGGACAGGGCACTAGTCA
GAGTGGGGGCAGGGAGGAAAGAGCAAATGTCCACCGAGGGCAGCACCACC
ATGACTGGCAGGCACCACCGCCCCAGCAGCAGCAACCGCAGCCGCAGCAA
CAGCAGCAATGGCAGCAGCCACGCCGCAGATGCAGGCGTCACCACCGTCC
TAATAGTTACAGGGAAGGGGGGGGTATGACGGGGGTCCTCAAGGGGGCAC
GGTCTACTGCGGCCAGCAAGGCAACTTCCATACTGGAAGGTGGGTGGGAG
GTGACAGGGGCGGTAACGTGTCTGTCAAGGAGGAAGTGAAGGAGGAGGAG
GTGTTGAGGGAAGAAAAGACTACACATGTTGATGAAAAGCTCAAAACAGA
GTTCCAAGAAGGGTTGTCGAACAAAGAGAAAGAAATCGAAACTCTGAAGC
AGAAGTTGGCTGAAATGGGAGGTCAGTTCAGACAAGTGAGCCTCCAGGAC
ACGGACGAAAAACCTCGAACATGTGCAACAGCAGTCGCATCTGAACCTAG
TGTGGCTGCAAGGGAGGTGGCGCCTGTCAAACAAGAGCAGGAAGATGTTG
TGTCTCACTCAGCGACGGTAGCGACGGTTAAGAAAGAACCGGAGAGCATC
ACGATCCAGCCGTTGACCTCGAGGGAGAAACAAAAAAATACGGGTTATGT
GACGATGAACATGAAGGATTGGACTAAGCTTCCTTGGATACCACTTGCTG
ATTCGCCGGGAGAGCTGGTTTCTTTCAACACAAGGTTGGAAGATACGGTC
AACGATGTGTTTTTGGCGGTGGGGGATTACTGTGGATGGTGGGTCCCAGG
GCGGGAAAAACCTGTGCACAGGCATCTGATCACTTCCATTACCCGATCCA
TGTCCCCTGCCCAGACGATGACGTTCCGCGAGAAGATAGTCAAGGTCTTT
GCGGACACATCGAAGAAGATGGAAGAAGGGTCAACGGGTAGGAAGGCGCT
GGCATTGTTCACTTCGGCGTTGGGGAGGTTAGTGAGTTCATCCTCGCCCG
AGAAAATGGTGGACGACTTGCAGACCTTTGCGGTACCGACTGGAACGCCG
TATAGTGAGTACTTGAGTACCTTGCAGGGGTTGGTGCACAATGTTCGGAA
CTTGGGAATTGTGACGCCGCAGGATAAGACAATTCAACTGGCAGTCAGAG
AGAGTGTGTCTGATCAACACAGTGTTCTGACCGCTTCCGTGTTTAAGGGC
AAGGAGTTGGGAGTGGTGCCGTTCGATAACATAGACACCTTGATGCATGA
ATTGCGAGATTTCGAGGCGGTCAAGGGGGGGGCAACGACTCCGACGCGAA
GGATGGCTCAGGTGAAGAGCTCCTCTGGGG back to topprotein sequence of EsuBft555_8a-0001 >EsuBft555_8 ID=EsuBft555_8|Name=EsuBft555_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=50bp
MSTEGSTTMTGRHHRPSSSNRSRSNSSNGSSHAADAGVTTVLIVTGKGGV back to topmRNA from alignment at Scaffold_581:96464..97843- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft555_8a-0001 ID=EsuBft555_8a-0001|Name=EsuBft555_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1380bp|location=Sequence derived from alignment at Scaffold_581:96464..97843- (Ectocarpus subulatus male Bft15b)
ATGCCAAGGCATTCGAGGGGTGGTGGTCGAGGAGGACAGGGCACTAGTCA
GAGTGGGGGCAGGGAGGAAAGAGCAAATGTCCACCGAGGGCAGCACCACC
ATGACTGGCAGGCACCACCGCCCCAGCAGCAGCAACCGCAGCCGCAGCAA
CAGCAGCAATGGCAGCAGCCACGCCGCAGATGCAGGCGTCACCACCGTCC
TAATAGTTACAGGGAAGGGGGGGGTATGACGGGGGTCCTCAAGGGGGCAC
GGTCTACTGCGGCCAGCAAGGCAACTTCCATACTGGAAGGTGGGTGGGAG
GTGACAGGGGCGGTAACGTGTCTGTCAAGGAGGAAGTGAAGGAGGAGGAG
GTGTTGAGGGAAGAAAAGACTACACATGTTGATGAAAAGCTCAAAACAGA
GTTCCAAGAAGGGTTGTCGAACAAAGAGAAAGAAATCGAAACTCTGAAGC
AGAAGTTGGCTGAAATGGGAGGTCAGTTCAGACAAGTGAGCCTCCAGGAC
ACGGACGAAAAACCTCGAACATGTGCAACAGCAGTCGCATCTGAACCTAG
TGTGGCTGCAAGGGAGGTGGCGCCTGTCAAACAAGAGCAGGAAGATGTTG
TGTCTCACTCAGCGACGGTAGCGACGGTTAAGAAAGAACCGGAGAGCATC
ACGATCCAGCCGTTGACCTCGAGGGAGAAACAAAAAAATACGGGTTATGT
GACGATGAACATGAAGGATTGGACTAAGCTTCCTTGGATACCACTTGCTG
ATTCGCCGGGAGAGCTGGTTTCTTTCAACACAAGGTTGGAAGATACGGTC
AACGATGTGTTTTTGGCGGTGGGGGATTACTGTGGATGGTGGGTCCCAGG
GCGGGAAAAACCTGTGCACAGGCATCTGATCACTTCCATTACCCGATCCA
TGTCCCCTGCCCAGACGATGACGTTCCGCGAGAAGATAGTCAAGGTCTTT
GCGGACACATCGAAGAAGATGGAAGAAGGGTCAACGGGTAGGAAGGCGCT
GGCATTGTTCACTTCGGCGTTGGGGAGGTTAGTGAGTTCATCCTCGCCCG
AGAAAATGGTGGACGACTTGCAGACCTTTGCGGTACCGACTGGAACGCCG
TATAGTGAGTACTTGAGTACCTTGCAGGGGTTGGTGCACAATGTTCGGAA
CTTGGGAATTGTGACGCCGCAGGATAAGACAATTCAACTGGCAGTCAGAG
AGAGTGTGTCTGATCAACACAGTGTTCTGACCGCTTCCGTGTTTAAGGGC
AAGGAGTTGGGAGTGGTGCCGTTCGATAACATAGACACCTTGATGCATGA
ATTGCGAGATTTCGAGGCGGTCAAGGGGGGGGCAACGACTCCGACGCGAA
GGATGGCTCAGGTGAAGAGCTCCTCTGGGG back to topCoding sequence (CDS) from alignment at Scaffold_581:96464..97843- >EsuBft555_8a-0001 ID=EsuBft555_8a-0001|Name=EsuBft555_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=153bp|location=Sequence derived from alignment at Scaffold_581:96464..97843- (Ectocarpus subulatus male Bft15b)
ATGTCCACCGAGGGCAGCACCACCATGACTGGCAGGCACCACCGCCCCAG
CAGCAGCAACCGCAGCCGCAGCAACAGCAGCAATGGCAGCAGCCACGCCG
CAGATGCAGGCGTCACCACCGTCCTAATAGTTACAGGGAAGGGGGGGGTA
TGA back to top
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