Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft509_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 149 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft509_3a-0001 ID=EsuBft509_3a-0001|Name=EsuBft509_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1495bp|location=Sequence derived from alignment at Scaffold_235:354353..357301- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCCCTTGGAATCCCAAACAGCAGCAGCTCCAACTTGTCTTCTTTCCG
CAGTTTCTGCTTCCATCCTCCAAGCTTCTTCACCATCCTCATGGATCTCT
ACGGCAACTGGACCGTGGCCACTGTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCCCCGACCACCCACTTCAT
CATCTCCGAAATCCCGCGGTACAGGCTACTTTCCTCCTGGGAGGTCATTT
TCACCACAATAAGTTCAGGGACGACTTGCATAGCCTANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ATCCATTTTGCATCTCACGCCGGAGAGTTTTGGGGTGTCTTAGCTCCAAG
TCCTCCACCGCCCAATGGGACTTTGGTATTTTTTTAATGCCGTACCAATA
GGCATTAGCCTTAGGTAAGCTTGTGCTTACTTTGGACTGTACCCTCCTCA
TCCTCTGGGGGAGGTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGGCAAAAACCAATGCATCTGTGAGGTTTCAGTACGCAACTATCCTCAC
TCAACACGTTTATGTGTCGGGCAATCTCCAATGCAAATCACCTGTGAGGT
TCCATATGTGTCTTTCCTCACTCAACGCGTCTCTGTGTCCGGCACTTTCC
AACATCACTCAACTCGTGAGGTTTCAGTATGCAGCTATCCCCACTCAACC
CGTCCATGTGTCTGGCAACCTCAAACCTACTCGACCCTTGGGGTTTCAGT
ATACAGCTTTAATCACTCAACACGTCTATGTGTCCGGTAATCCCCTACAT
CACTCAACCTGTGAGGTTTCCGTAAGCTACCCTCACTCCACGCATCCATG
CGTCACGCGTCTTTGGTAGCATACTATGGGGGCTATATTTGGGGTGGCGT
GTTTTACAGCGCTTTGCCAACAGCGCCAACCCACTTAAGTCTAGA back to topprotein sequence of EsuBft509_3a-0001 >EsuBft509_3 ID=EsuBft509_3|Name=EsuBft509_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=50bp
MSLGIPNSSSSNLSSFRSFCFHPPSFFTILMDLYGNWTVATVXXXXXXXX back to topmRNA from alignment at Scaffold_235:354353..357301- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft509_3a-0001 ID=EsuBft509_3a-0001|Name=EsuBft509_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2949bp|location=Sequence derived from alignment at Scaffold_235:354353..357301- (Ectocarpus subulatus male Bft15b)
ATGTCCCTTGGAATCCCAAACAGCAGCAGCTCCAACTTGTCTTCTTTCCG
CAGTTTCTGCTTCCATCCTCCAAGCTTCTTCACCATCCTCATGGATCTCT
ACGGCAACTGGACCGTGGCCACTGTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCCCCGACCACCCACTTCAT
CATCTCCGAAATCCCGCGGTACAGGCTACTTTCCTCCTGGGAGGTCATTT
TCACCACAATAAGTTCAGGGACGACTTGCATAGCCTANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ATCCATTTTGCATCTCACGCCGGAGAGTTTTGGGGTGTCTTAGCTCCAAG
TCCTCCACCGCCCAATGGGACTTTGGTATTTTTTTAATGCCGTACCAATA
GGCATTAGCCTTAGGTAAGCTTGTGCTTACTTTGGACTGTACCCTCCTCA
TCCTCTGGGGGAGGTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGGCAAAAACCAATGCATCTGTGAGGTTTCAGTACGCAACTATCCTCAC
TCAACACGTTTATGTGTCGGGCAATCTCCAATGCAAATCACCTGTGAGGT
TCCAGTATGTGTTTTTCCTCACTCAAAGCGTCTATGTGTCCGGCAATCTC
CAATACAAATCAACCTGTGAGGTTTCAGTATGCAGCTTTCGTCACTCAAC
GCGTCTAGGTGTCCTGCAATCTCCAATGCAAAACACGTGTGAGGTTTCAG
TATGTGTCTTTCCTCACTCAACGCGTCTCTGTGTCCGGCACTTTCCAACA
TCACTCAACTCGTGAGGTTTCAGTATGTAGCTATCCCCATTCAGCGTGTC
TGTGTCTGGCAAACTCAAAAACCAATCCATCTGTGAGGTTTCAGTATGCA
GCTATCCCCACTCAACGCGTCTATGTGTTGGGCAAACTCAAAAACCAATC
CATCCGTGAGGTTTCAGTATGCAGCTATCCTCACTCAACCCGTCTGTGTC
CGGCACTATCCAACATCACTCAACTCGTGAATGTAGCTACCCCCACTCAA
CGCGTCTATGTGTCTGGCAAACTCAAAAACCAATCCATCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAACTCAAAAACC
AATCCATCTGTGAGGTTTCAGTATGCAGCTATCCCCACTCAACGCGTCTG
TGTCTGGCAAACTCAAAAACCAATGCATCTCAAACTCAAAGCGTCCATGT
GTCTGGCAAACTCAAAAAACAATCCATCTGTGAGGTTCCAGTATGCAGCT
ATCCCCACTCAACGCGTCTATGTGTCTGGCAAACTCAAAAACCAATCCAT
CTGTGAGGTTTCAGTATGCAGCTATCCTCGCTCAACACGTCTATTTGTCC
GGCAATCTCCATCACAAATCACCTGTGAGGTTCAGTATGTGTCCTCACTC
AACGCGTCTGTGTCTGGCAAACTGAAAAACCATTTCATCTGTGAGGTTTC
AGTATGCAGCTATCCCCACTCAACCCGTCCATGTGTCTGGCAACCTCAAA
CCTACTCGACCCTTGGGGTTTCAGTATACAGCTTTAATCACTCAACACGT
CTATGTGTCCGGTAATCCCCTACATCACTCAACCTGTGAGGTTTCCGTAA
GCTACCCTCACTCCACGCATCCATGCGTCACNACTCGACCCTTGGGGTTT
CAGTATACAGCTTTAATCACTCAACACGTCTATGTGTCCGGTAATCCCCT
ACATCACTCAACCTGTGAGGTTTCCGTAAGCTACCCTCACTCCACGCATC
CATGCGTCACGCGTCTTTGGTAGCATACTATGGGGGCTATATTTGGGGTG
GCGTGTTTTACAGCGCTTTGCCAACAGCGCCAACCCACTTAAGTCTAGA back to topCoding sequence (CDS) from alignment at Scaffold_235:354353..357301- >EsuBft509_3a-0001 ID=EsuBft509_3a-0001|Name=EsuBft509_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=150bp|location=Sequence derived from alignment at Scaffold_235:354353..357301- (Ectocarpus subulatus male Bft15b)
ATGTCCCTTGGAATCCCAAACAGCAGCAGCTCCAACTTGTCTTCTTTCCG
CAGTTTCTGCTTCCATCCTCCAAGCTTCTTCACCATCCTCATGGATCTCT
ACGGCAACTGGACCGTGGCCACTGTNNNNNNNNNNNNNNNNNNNNNNNNN back to top
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