Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft468_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 33 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft468_4a-0001 ID=EsuBft468_4a-0001|Name=EsuBft468_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=339bp|location=Sequence derived from alignment at Scaffold_189:355528..356773+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCAGATTTTGTCGGGGTCGAAGCGATGACTGCCTTGTCCGCCCGGTTCAA
CGGGGTTCGAGACATGACCGCTGCCATCATGTCCAAGTTCGACGCGGACA
TGGCTGCGTGCAGGGACCGGACGGCAGACGGCTGCAACGGCACGGGGCCA
GCAAAACAGGGCAGCAGCACCGACAGCGACACCGACACCGACACCGACAC
CGGCAGCGATGGCGCCATCACTGACATGGACGTCGCCGAGGACGACAAGT
CCATCGGTGGCGACACCGTTGCTGAGGAAGCCGAGTCCGTCCAACCGATC
GACGACGGCAACGACCCACCGAAGCTGGTGGAGCCGTAA back to topprotein sequence of EsuBft468_4a-0001 >EsuBft468_4 ID=EsuBft468_4|Name=EsuBft468_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=104bp
MTALSARFNGVRDMTAAIMSKFDADMAACRDRTADGCNGTGPAKQGSSTD
SDTDTDTDTGSDGAITDMDVAEDDKSIGGDTVAEEAESVQPIDDGNDPPK
LVEP back to topmRNA from alignment at Scaffold_189:355528..356773+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft468_4a-0001 ID=EsuBft468_4a-0001|Name=EsuBft468_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1246bp|location=Sequence derived from alignment at Scaffold_189:355528..356773+ (Ectocarpus subulatus male Bft15b)
CCAGATTTTGTCGGGGTCGAAGCGATGACTGCCTTGTCGTCCTTGAGTTT
GGTTGCCGTAGCTAGGGCTTGTGTCTGCCAAGAGCTTTCAAGCTCGTAAC
ACTTACCATGATGGAGAGCTACTACTTGTGTGCATCGTTGTTGTTTCTGT
TGTTGCTGTTCCCTGCTGCGGTTGATCCTGTTATGCTTGGCCTCTCTCAC
AATTGCTGTTGATTCTGGAAGCTCTGATGCTTGCAGGCTTGCCCCGTTGC
TTCCGCTGTCTCCGTCATACCTATCTAGTCCTATGGCTGGCACGACAAGG
TTGTTACCGTAAATGACACAAGATAACACACCCCCTGGACCGATTTTCAA
ATCTCGATTTCTCAACAGCAGAAAGAGTAATGGCGCCGAAAACGGCGGCG
TTGGAACCATCTCGTCGAGAGCTTTCCAAAAATGTATCGTTTCGTTTGTG
CATCTTCTTCGTCGTGGAGTAATCGAGCTTTGAAAATTGGTCCGGGGGGT
GTGTTATCTTGTGTCATATACGGTATGCTCGGTCGAGCCTGGTGGTGATA
CAGAAACAAAGCAAACTATTATTGTTGCCAACACCGCTACGATTGACCGT
TAGAGTAAAGGGTAGCAAGTGCTACACGACACTAGAACTAACATGCGCCC
AATCTGTTCCCCCCGTCCGACACATGAATGCATGTTGTAGCGCCCGGTTC
AACGGGGTTCGAGACATGACCGCTGCCATCATGTCCAAGTTCGACGCGGA
CATGGCTGCGTGCAGGGACCGGACGGCAGACGGCTGCAACGGCACGGTGA
GTTGGTTCAACGGCAGGCATGTATCGTGAAGCAAGGCGTTGAACACATAA
CAAGAAAGTACGAACACACCACGGTAAACAGCAAGGGTTTGAAAAACGCT
TCCGTTCCCCAGCACTCCCGTCCCATAGTCAAATGCTTATGGCCAGCGAA
ATACAGCATTCTACGAGTACAATATCCCTACCTCTCCTTGGTACTCTCAC
CGACTATTTCACCACGATTGGCCTGTGCGTTGTCTTTCTTTCGCTCAACA
GGGGCCAGCAAAACAGGGCAGCAGCACCGACAGCGACACCGACACCGACA
CCGACACCGGCAGCGATGGCGCCATCACTGACATGGACGTCGCCGAGGAC
GACAAGTCCATCGGTGGCGACACCGTTGCTGAGGAAGCCGAGTCCGTCCA
ACCGATCGACGACGGCAACGACCCACCGAAGCTGGTGGAGCCGTAA back to topCoding sequence (CDS) from alignment at Scaffold_189:355528..356773+ >EsuBft468_4a-0001 ID=EsuBft468_4a-0001|Name=EsuBft468_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=315bp|location=Sequence derived from alignment at Scaffold_189:355528..356773+ (Ectocarpus subulatus male Bft15b)
ATGACTGCCTTGTCCGCCCGGTTCAACGGGGTTCGAGACATGACCGCTGC
CATCATGTCCAAGTTCGACGCGGACATGGCTGCGTGCAGGGACCGGACGG
CAGACGGCTGCAACGGCACGGGGCCAGCAAAACAGGGCAGCAGCACCGAC
AGCGACACCGACACCGACACCGACACCGGCAGCGATGGCGCCATCACTGA
CATGGACGTCGCCGAGGACGACAAGTCCATCGGTGGCGACACCGTTGCTG
AGGAAGCCGAGTCCGTCCAACCGATCGACGACGGCAACGACCCACCGAAG
CTGGTGGAGCCGTAA back to top
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