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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LGZ4 |
| ProteomeId | EsuBft451_24 |
| Protein domains | TRANSMEMBRANE |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | IPR009249 |
| Protein domains | TMhelix |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | -dihydrobiliverdin:ferredoxin oxidoreductase os:nostoc punctiforme (strain atcc 29133 pcc 73102) gn:peba pe:3 sv:2 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 209 |
| Hectar predicted targeting category | signal anchor |
| Evalue | 3.63e-148 |
| EggNOG OGs | 28II3@1|root,2S2CU@2759|Eukaryota |
| Ec32 ortholog description | Ferredoxin-dependent bilin reductase |
| Ec32 ortholog | Ec-14_001370.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Ferredoxin-dependent bilin reductase |
| COG category | C |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0050897 |
| GO | 0016636 |
| GO | 0010024 |
| GO | 0055114 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft451_24a-0001 ID=EsuBft451_24a-0001|Name=EsuBft451_24a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2092bp|location=Sequence derived from alignment at Scaffold_284:548140..553057+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGAGCACGTCAAGTTGGGAAGGACAGAAAGAGGAGGTGGGGGAACAGGAG AGTCCGCAACGCCCACACTCGCGAACCTCCTCTCCACCCCTTCTCTGTCT GAGGAAAATGTCGCCGTCTCTAGGCGTAATCGGCGCCGAACCGCGATGTA ACGAAAACAGCAGGAACGGAGGGAGGAGCAGCTCACGGGACGCTTGGTCA TGCGGGAGAGCGGGCAGCAGGTGGCAGCAGGAGACGGGCGAGCAGCGGCG GCGAGAGGGGAGGATCACCCGGAGAAGGAGACGGACGCTCTGCGCCTTTT CCGCTGTGATCGCCGGCTACGCAGCTGCCTCACTGCCGTGCGGAGCGGGC TTCGTGGCGCCAGGCGTGCAGCAGGCCGGCGGCCGATCAGCTGCTGCTGT ACCCTCGTATGTTCGTTCAGCAGCGCCGGGCGGGGGGGAGACCAGGAGGG CAGGAATGCGGCGAAGACGACCATCGGATGCTGTACACATGGTTGCAATG GAGCCTCGCGTTAACTCGAAGGGCTCAGCGACGGAAACGGTGGCGCCGGC ACGGCCTCCTGGCAAGGAGGGGCCGCACTTGCCGTGGACGGGGTCGATGG CGGGCCCGGAGTTCCCCCTGACGTACATGCCGTTCATGGAGCACATGCTC AACGTGCTTGCGCGCTCTTTCGGGGAGATGACGGCGCTGCCTCTAGCCGA CAAGCTGGCCTTCGTAGAGAACACGGACAAGAAGGCCCGCATGTTGAGCA TGAGCTTCGCCAGCCCGGAGGTACGAAAGGTGCGGCTCACATACTTCGAT GCGGGGGACAAGGTGCAGGTCCTGAACGCCGTCATCTACCCGGACCCGTC GCTAGACATGCCGCTGCTGGGGATAGATCTCATCTCCTTCGGAGGCAAGC ACCTGGCGGGGATCGACTTCCAGCCGCTCTTCGACAATGACTCTTGTCGT TGCCGGTACTCGGACAAGCTTGCACCCATCAAGGCGAAATATCCGGAGTT CGCCCAGAAGATGTCGCCGCGCTTCTACGACAGCGCGCGATTCTTCAGTG AGGAGATGCTCTTCGGAAGATACGAAGATGAGGCCATTGTAGAGGAAAAG CTTTTCCCGGCGTTCGACGAGTACCTCTCGCTCTACATCTCCGACCTGCT CAAGGCCGCCGAGGAGGGCGGGAACCCCTCGCCGGAGGCCCAGGCGCGCG TGCTGGACCGCCACCGCGCGTACGACCAGTACAACGCGGAGCGCGACCCG GCGCACGGGCTGTTCCGCACCTACTTTGGCGAGGCGTACAGCGAAGACTT CATGGACAACTTCCTGTTCGAGCTGAGCACCAGACCGGAGGGTGGCTACC CCAAGGGCACGGCTCGTGGGGGAGGGGGGGGCGCGAACGGCCGGCCAGCG GGAGGGAACCCTCACGCGTAGTTTTGTCACTTCCGTTATTATGGTGCATG TGGTTTTTGTGGGATGGCGAGCGAAGATGCTGTCTCTTTGCGCGGATTTG CAGTGGTTGACGCGCGCCAAGGGTGTAGGGGGAGAGGGTGAAGGAATGCG ATGTGATTTTTTGGCTGTGCGTATGCATGAAAAGGATACAGCCCGTTTTT CTAAAGTTTGGCTTGTTTTAGAACGAAGCGTGTTGACTTGTTCTCGGAAG AAAATAGCGCGTGTTGACACTCTGGTCGACACACACGGCAAGGGAAAGCA ATAAATGCACATGTCTATGTTTTTTTGTAAGTCCTGCTGTCAAGAATGAT GACTTTTTATATGCTGGCGAAGGTACACGGCAACAGGACTAATCTCGGGC CGTGCAAGGTGAGGCAGCCTGAGTGTTGATTTTCTTTTATTTTCCTGTTG GAGCGTGTAGAGGCGATGAGCGTTCTTTGAGGGTGTACAGAATGATGCTG GAGTTGATGCTCCTGGTGAGGGAAGACATAAGTCGAGTACACGTGAAGCA GTAGGTTTTTAGTGTTTGTTTGGTCGCGTTCCCGAACGACGAACGTATCC CTTGATGTGCTTGGAATACTGTAGCAAAATAAATCTTGCTACCCCATGCT ACAGGCGTTCTTTGTGAGAGTGTTGGACAACAACCACTGGGG back to topprotein sequence of EsuBft451_24a-0001 >EsuBft451_24 ID=EsuBft451_24|Name=EsuBft451_24a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=437bp
MSPSLGVIGAEPRCNENSRNGGRSSSRDAWSCGRAGSRWQQETGEQRRRE GRITRRRRRTLCAFSAVIAGYAAASLPCGAGFVAPGVQQAGGRSAAAVPS YVRSAAPGGGETRRAGMRRRRPSDAVHMVAMEPRVNSKGSATETVAPARP PGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKL AFVENTDKKARMLSMSFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLD MPLLGIDLISFGGKHLAGIDFQPLFDNDSCRCRYSDKLAPIKAKYPEFAQ KMSPRFYDSARFFSEEMLFGRYEDEAIVEEKLFPAFDEYLSLYISDLLKA AEEGGNPSPEAQARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMD NFLFELSTRPEGGYPKGTARGGGGGANGRPAGGNPHA back to topmRNA from alignment at Scaffold_284:548140..553057+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft451_24a-0001 ID=EsuBft451_24a-0001|Name=EsuBft451_24a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4918bp|location=Sequence derived from alignment at Scaffold_284:548140..553057+ (Ectocarpus subulatus male Bft15b) TGAGCACGTCAAGTTGGGAAGGACAGAAAGAGGAGGTGGGGGAACAGGAG
AGTCCGCAACGCCCACACTCGCGAACCTCCTCTCCACCCCTTCTCTGTCT
GAGGAAAATGTCGCCGTCTCTAGGCGTAATCGGCGCCGAACCGCGATGTA
ACGAAAACAGCAGGAACGGAGGGAGGAGCAGCTCACGGGACGCTTGGTCA
TGCGGGAGAGCGGGCAGCAGGTGGCAGCAGGAGACGGGCGAGCAGCGGCG
GCGAGAGGGGAGGATCACCCGGAGAAGGAGACGGACGCTCTGCGCCTTTT
CCGCTGTGATCGCCGGCTACGCAGCTGCCTCACTGCCGTGCGGAGCGGGC
TTCGTGGCGCCAGGCGTGCAGCAGGCCGGCGGCCGATCAGCTGCTGCTGT
ACCCTCGTATGTTCGTTCAGCAGCGCCGGGCGGGGGGGAGACCAGGAGGG
CAGGAATGCGGCGAAGACGACCATCGGATGCTGTACACATGGTGGGTAGA
GGGCACGTTTCTTTGATGACAGTCGTGCATGGCCGTACTCGCGTTGCTCA
ACACATGATAGCGTATGCACATGTTGCGCCCGTATCGTCTCCCCCCTTCT
CGAAACATGCATTTGTATTGTCATGGATCTTTTTTCGTCTGCTGCTGTTC
ATGGAAGATGCTTTCGTTCATGGTTCAGATTTCGACCCGCATTTCATCTC
TCAATTATGCATTCCTCCATGTTGTTTCCTCGCCGTATAGCTATGCCACC
TATATCTCAAGTCCTGTATTGAAGGTACCTCTTCCCATGAATCCCTCATA
CGACAACATGTTGTTATTGAACTTGGCGTATATGTTTGGGGCAGGTTGCA
ATGGAGCCTCGCGTTAACTCGAAGGGCTCAGCGACGGAAACGGTGGCGCC
GGCACGGCCTCCTGGCAAGGAGGGGCCGCACTTGCCGTGGACGGGGTCGA
TGGCGGGCCCGGAGTTCCCCCTGACGTACATGCCGTTCATGGAGCACATG
CTCAACGTGCTTGCGCGCTCTTTCGGGGAGATGACGGCGCTGCCTCTAGC
CGACAAGCTGGCCTTCGTAGAGAACACGGACAAGAAGGCCCGCATGTTGA
GGTTAGTCCCCCTTTTTGGGCACCTGATACTACTTAATTTGAGCGCTCGC
GTATCTGTAGCATGGCGGAGATGCTGTTTTTGCAAAACGCAGTCCGTTCA
TTCGCGTCGCGTCGGGTGCGACAGACATACATGTGGCACCAGCTACTGTG
CTACATAGCATAGCATGTCGCTCGGCGGTCATGAACTCTACATTAGTGTC
CCGTAGATTCGCCTACAACATGGAATGCATGCTGTACATCTCGCGATAAA
AATACCTCAGGCATGAACCGCAGGAGGGGGTCCAACCCCCCCCCTCCTAT
GTGACCCCGGTTGGGTCGTCTAGCTAGTAGAAGTGGAGGATAGGGGCCAG
AGGGGCAGACGACAGAGTCCAATGATGGGAGGAAAAAAAAAAAAAATCTG
GAATATTTTTGTGTTTGTCTGAGGTGGCGAGGTATTTTGCCGATTCGGTA
ACGCGTGACTCAAAAGATGCTGCTACTTCATCAGTTGAACCGCAAGTGAA
TAATCATTCCATAGGCAACACACAACACGAAGTATCAGCTTGAAGCACAA
GTGATTTGACTGAGGAGAGTGCAGTTGCGGGCGCTGATCTACATAGTACT
GCCGCTTCGGATGGGACAGCAGTTGCACCTTACAGTTAATATACACGACG
AGTATCTAGCACGGAAAGAACATCATAAGTGTCCTGGCGTAATGTACGTA
CACGTATGCATTTTCGTGTGTTTGGTTTTGTTTTGTTTCTTGGAAGTCAT
CGCTTGGAATTTAATGAGTGTAGTTGGTGGTTGCTTGTCGGGTAGGTAGC
ACGTGCTATACACTGCGAGCAGGTGCGCCTGCTTTCTCTGGCGAAGCGGC
AGTAGATGAGCAGCAGCAGTTGCAGTCCTGTCAGTTTAGTTGCGTTTCAA
CTGATGAACGGCAGCATCTCTTGGTAGCGTTACCGAATCGGCGTTACCTG
GCCACCTCAGACCAAGCAATAATTGTTCTTTCCATTCGGGGACGGCGTTC
TAGAATCTACCCGGGACAGAGAGTAGATGATTGCTGCAGCAATTGTAGCA
TTTTTGTTATCCACGTGATCCAAAAGGCCTACTACATTTGTCGACTTGCT
AGTGAGGACTCGCCGTGCTGTGGTTTGGTTCGATGTTTTCAACCAGCTGT
GTCCCACACTCGCCCGTGTTTGTTTTAGTCTACCGGTGGCAGTAGCGTCT
CGAGCCTTGTCGGCGGGAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGGGGGGGGGGGGGGGGGGGAGCTGAGCTGGCGGGAAGATCT
AACCCGGCGAAACACCAATGACCTGGAGGGCGGAGAGTGCATGGAAGTAG
AAGCGGGTTCGATAAGGGGGGTGACCAAGAATGGCGCTTGGACACTGGGT
GTATGTTCTTGTGGACGTCGTTTGCGTATGCTTGTGGACGTGGCGCATTG
CTCCACGTCTCGTCGTTGACTGACCCGGTTGCCCCCGCCCCCCAAAACAA
CCACGAAAAACGCCTGCAACAACACCAGCATGAGCTTCGCCAGCCCGGAG
GTACGAAAGGTGCGGCTCACATACTTCGATGCGGGGGACAAGGTGCAGGT
CCTGAACGCCGTCATCTACCCGGACCCGTCGCTAGACATGCCGCTGCTGG
GGATAGATCTCATCTCCTTCGGAGGCAAGCACCTGGCGGGGATCGACTTC
CAGCCGCTCTTCGACAATGACTCTTGTCGTTGCCGGTGAGATTCTGAAAC
CGCTCGTTATTGTAACGTGTAAACCATATTTATTTATTGAAGAGGAAGAA
CGGAATCCGAACAATATCTGCTGTTGCTTCGGCGATTGGTTTTGCGTTTT
GCCCCACCGGTACAAGTAGTTAACACATGACGCTCGGTTGTTTTTGCGGG
AGTGTTGCGCAGTCCTAAGTACATGGGTGAGACCTGAACACTAACCGCCA
TGATGACACCATGATGTTTCCCATGGACATCCCTTGCTCGCCCGCGGGAC
GCGATGCCTGCATCCACGCACATGTATCGCGTGCGGTGTTTCGCGGTGGT
TCACAAACCCTCCTCGACCATGTCGCGCATCGTGTCCATGTCCCCCAGGT
ACTCGGACAAGCTTGCACCCATCAAGGCGAAATATCCGGAGTTCGCCCAG
AAGATGTCGCCGCGCTTCTACGACAGCGCGCGATTCTTCAGTGAGGAGAT
GCTCTTCGGAAGGTGAATGATCGTTGGTCGTTGACTAGTCTACCCCCCTC
CCCCTCAACCCCAGCGCACGATCTTCACTAGCGTTGACTTTGCTCAGACC
TTTCCAAATGTTTCATCTCCTGTGGTGCTTGCTGCAGGACTGCAGCACAC
TACTGCAGTTCCCCCCCGATTGCGCTCAGCCCATCACCCTCGTCTTTTAC
CACACACTTGCGGTCCGCCGGCACGTAATCCCTACTCCTGAGATCTCACT
TGCGTAATAACCACCCCACCCCCCCACCCCAAAACACCACCTCAGATACG
AAGATGAGGCCATTGTAGAGGAAAAGCTTTTCCCGGCGTTCGACGAGTAC
CTCTCGCTCTACATCTCCGACCTGCTCAAGGCCGCCGAGGAGGGCGGGAA
CCCCTCGCCGGAGGCCCAGGCGCGCGTGCTGGACCGCCACCGCGCGTACG
ACCAGTACAACGCGGAGCGCGACCCGGCGCACGGGCTGTTCCGCACCTAC
TTTGGCGAGGCGTACAGCGAAGACTTCATGGACAACTTCCTGTTCGAGCT
GAGCACCAGACCGGAGGGTGGCTACCCCAAGGGCACGGCTCGTGGGGGAG
GGGGGGGCGCGAACGGCCGGCCAGCGGGAGGGAACCCTCACGCGTAGTTT
TGTCACTTCCGTTATTATGGTGCATGTGGTTTTTGTGGGATGGCGAGCGA
AGATGCTGTCTCTTTGCGCGGATTTGCAGTGGTTGACGCGCGCCAAGGGT
GTAGGGGGAGAGGGTGAAGGAATGCGATGTGATTTTTTGGCTGTGCGTAT
GCATGAAAAGGATACAGCCCGTTTTTCTAAAGTTTGGCTTGTTTTAGAAC
GAAGCGTGTTGACTTGTTCTCGGAAGAAAATAGCGCGTGTTGACACTCTG
GTCGACACACACGGCAAGGGAAAGCAATAAATGCACATGTCTATGTTTTT
TTGTAAGTCCTGCTGTCAAGAATGATGACTTTTTATATGCTGGCGAAGGT
ACACGGCAACAGGACTAATCTCGGGCCGTGCAAGGTGAGGCAGCCTGAGT
GTTGATTTTCTTTTATTTTCCTGTTGGAGCGTGTAGAGGCGATGAGCGTT
CTTTGAGGGTGTACAGAATGATGCTGGAGTTGATGCTCCTGGTGAGGGAA
GACATAAGTCGAGTACACGTGAAGCAGTAGGTTTTTAGTGTTTGTTTGGT
CGCGTTCCCGAACGACGAACGTATCCCTTGATGTGCTTGGAATACTGTAG
CAAAATAAATCTTGCTACCCCATGCTACAGGCGTTCTTTGTGAGAGTGTT
GGACAACAACCACTGGGG back to topCoding sequence (CDS) from alignment at Scaffold_284:548140..553057+ >EsuBft451_24a-0001 ID=EsuBft451_24a-0001|Name=EsuBft451_24a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1314bp|location=Sequence derived from alignment at Scaffold_284:548140..553057+ (Ectocarpus subulatus male Bft15b) ATGTCGCCGTCTCTAGGCGTAATCGGCGCCGAACCGCGATGTAACGAAAA CAGCAGGAACGGAGGGAGGAGCAGCTCACGGGACGCTTGGTCATGCGGGA GAGCGGGCAGCAGGTGGCAGCAGGAGACGGGCGAGCAGCGGCGGCGAGAG GGGAGGATCACCCGGAGAAGGAGACGGACGCTCTGCGCCTTTTCCGCTGT GATCGCCGGCTACGCAGCTGCCTCACTGCCGTGCGGAGCGGGCTTCGTGG CGCCAGGCGTGCAGCAGGCCGGCGGCCGATCAGCTGCTGCTGTACCCTCG TATGTTCGTTCAGCAGCGCCGGGCGGGGGGGAGACCAGGAGGGCAGGAAT GCGGCGAAGACGACCATCGGATGCTGTACACATGGTTGCAATGGAGCCTC GCGTTAACTCGAAGGGCTCAGCGACGGAAACGGTGGCGCCGGCACGGCCT CCTGGCAAGGAGGGGCCGCACTTGCCGTGGACGGGGTCGATGGCGGGCCC GGAGTTCCCCCTGACGTACATGCCGTTCATGGAGCACATGCTCAACGTGC TTGCGCGCTCTTTCGGGGAGATGACGGCGCTGCCTCTAGCCGACAAGCTG GCCTTCGTAGAGAACACGGACAAGAAGGCCCGCATGTTGAGCATGAGCTT CGCCAGCCCGGAGGTACGAAAGGTGCGGCTCACATACTTCGATGCGGGGG ACAAGGTGCAGGTCCTGAACGCCGTCATCTACCCGGACCCGTCGCTAGAC ATGCCGCTGCTGGGGATAGATCTCATCTCCTTCGGAGGCAAGCACCTGGC GGGGATCGACTTCCAGCCGCTCTTCGACAATGACTCTTGTCGTTGCCGGT ACTCGGACAAGCTTGCACCCATCAAGGCGAAATATCCGGAGTTCGCCCAG AAGATGTCGCCGCGCTTCTACGACAGCGCGCGATTCTTCAGTGAGGAGAT GCTCTTCGGAAGATACGAAGATGAGGCCATTGTAGAGGAAAAGCTTTTCC CGGCGTTCGACGAGTACCTCTCGCTCTACATCTCCGACCTGCTCAAGGCC GCCGAGGAGGGCGGGAACCCCTCGCCGGAGGCCCAGGCGCGCGTGCTGGA CCGCCACCGCGCGTACGACCAGTACAACGCGGAGCGCGACCCGGCGCACG GGCTGTTCCGCACCTACTTTGGCGAGGCGTACAGCGAAGACTTCATGGAC AACTTCCTGTTCGAGCTGAGCACCAGACCGGAGGGTGGCTACCCCAAGGG CACGGCTCGTGGGGGAGGGGGGGGCGCGAACGGCCGGCCAGCGGGAGGGA ACCCTCACGCGTAG back to top
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