Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft3854_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 348 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3854_3a-0001 ID=EsuBft3854_3a-0001|Name=EsuBft3854_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3482bp|location=Sequence derived from alignment at Scaffold_235:161724..165537- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAATAGGAGCAGCGGCGTTGTGTTCAGGGTGGTATGTGCGATGGGA
AGGTCAGGGGAACAGAGAGTAGCGAGAGACGAGAATGTTTTTTTTCTTTG
GTGGCCCGGGTGTTTCGCCAAATGGCAATACTAATGTTGATGGGCCTAGT
GGGGTTCTCTCGTGGTTTCAGTATGAACAAGCCGGTGTGGTACTATCAGC
GGCTTTGGGGGGCAGACAGAGTTTATATGAATGTCTGTCTGTTTGGTGGC
TGATGTTTATACTGATCGTAAGGAGTAGACCGGGGGCGTGTGTGGTGTTG
CCCTGCCTGGTCTCCGCTCTTTTCCCCTCCCCCTTGGCGAGCAAAGGGGG
TACGCAAAATAATAATGACAAATTTCGAAAGCATCGAGAAAAGCGAAAGA
TTGTCTGACGAAGTAAAGGAAATCTGCGTTTTGTGAGAAGCGGCAGAAAT
AAACCTTGGCCAATCAGAAAGCAGGAAGCGGACGAGCGTGTTGGTGTTCT
GTTTTCAGTCTACTCGCTTCGCCGTGTTTACCGGGGGCGAGCGAGAGCAC
GTGTGCGTGTGGTGGCCAAGGGTTGTTTTCTGCTGTGACGTTTCTATTTC
CCACCCACCCACCCTTGCTTTTGGGGGTGTCAGTGGACATGGAAATAGGA
GCAGCGGCGTTGTGTTCAGGGTGAGTGTCCGTCGGGGGGGACTCACTGTG
TAGCCGCAGTCGGGGTTGCGTGTGCCTATGCTGGGCGCAGTTCCGAGGTG
CTCGTCCCATTTATTTTGAGTGGGATTGGTGTACATCGCACTTCAGGTGG
TATATGCAGGACGCATGTTGTTGGGTGTATCGGACCGTTGCATGGTTGGG
GGAGTGCACTCCTGGCTGCTGTGTGTGGCTATGTTGGTGCTACGCGCTTC
CCCGTTACGTGCGTGACGAGTCTGATTGATTGGTGGATACGCATACATAT
TATATGGCTTATATGTGGGTGTCCTGGTGTCCGGGTACATGCGTGTTTTT
CTGCAGTGCGATGGGAAGGTCAGGGGAACAGAGAGTAGCGAGAGACGAGA
ATGTTTTTTTTCTTTGGTGGCCCGGGTGTTTCGCCAAATGGCAATACTAA
TGTTGATGGGCCTAGTGGGGTTCTCTCGTGGTTTCAGTATGAACAAGCCG
GTGTGGTACTATCAGCGGCTTTGGGGGGCAGACAGAGTTTATATGAATGT
CTGTCTGTTTGGTGGCTGATGTTTATACTGATCGTAAGGAGTAGACCGGG
GGCGTGTGTGGTGTTGCCCTGCCTGGTCTCCGCTCTTTTCCCCTCCCGCT
TGGCGAGCAAAGGGGGTACGCAAAATAATAATGACAAATTTCGAAAGCAT
CGAGAAAAGCGGTGCTCATCATCCACGCCGGCCGGCGTGCGTGCGCAAGG
ACTTGCGCACAGAATTTGCGCGCAAGCGATAAATAACGCCTCCAGAACTA
CCCTTACAGAACCATTTTGAATTCGTCCAGCGCACACACAAACGGCTCAA
CGGCACAGCAGCATACGCTGCGCTCTCTTCAGCGCTGCGTACCCTGACCC
ACAAGGAAGGACTGATGATGCGGTGAACGTCTTCAGCCTTTTTTCTTTTT
AATATTTCTCGAGAGAAGGGAAGGGCAATGATCTGCCCTCCTAGTCCTTC
GAAGTATTTACAGAGGATACATACGACGTCTGCACTTGTACCTTCTGTGA
GCAAAAGTTATTGGTAGGTCAACAAACGACTGCTGACAATAATTCCCAGT
CTCTTGTCCCTACTTTTTGTGCGGCTTCACAAAACTGAGTTATCTCTTTC
ATGCACAAGAAGACGAGATTTCAGGACAACAAATACCAACGTGGATTACC
ACAGACACAAACCACACGACACCTTGTTGAGATCTCAAACAAAATGCAGC
ACAGCAATCGTTTCTGCGCGCGAGTATCGTGGAGTACAGCATGGCGCGCG
GAAATAACTACAACATCGTCGTTGTTCCTAAGAACCACTGCGTAGTAGTC
TAATTGTTTCGGGGGCCAAGTTCACAAGGCATTGCCCCCAACATGAACCT
GCCNCCCCCCCCCCCCCCCCCCCCTCCTCTGCCCAGCCTCAAGCTCCGCA
CATGCAATAAATTTTTTGTTTGGCAAGCGCACATCCCGCCACTCCCACCT
TACACAAACTTCCACCACACATAGGCTCGCGCACCGGCAAAATCTATCGT
AAAGGTACCGGCGGGACGCCCCCTTCCCCAACCCTGACTCCGTCACAGGG
TGACACACATCCGTCCATCCGTCAAAGGCTTACTTCCGAAATAGTTTACA
CACCACAATCCTTCAACAACAAGCAATTCAAGGGTTCGGTTCAGGGCCAC
CTCCCCCATAGGCTTTGCTGTTGCTCCTGCTGCTGACGGTGTTTCCTCGA
GGTGATTCGAATGGGCATCACTGCCAATCGAGATCGGTGCAGCAGTAGTA
CGCGGAAACAACCTGAGCAAAGCAGAATGTTCGGCTCTTTTTTGCCACCC
CATCTATCTCCTCCCCCCCGGTGTTTGCCATCGGGGTTGGGTGTTCGTCG
CTTGGCAACGACGTTGTAAAACAAACAAGCCAATTCACTTCGTGAACTCG
GTAACCAGGTTACCGTTTTTTTCTTACCTCTTTTGTTTGGCGGTAACCAT
AATGGTGGTCGAATAGATCATGTTGTGTGGGGTGGACAATCTTCACTCCG
CGCAAGGGGGATGATCGCACCACGTTGCGTTAAAATGGTCAAGCACCCTC
GAGGCAGTTACACAGCACTGCTTACAACTTTCTTNCGGAGCTTCTCGCTT
GGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGC
TTTGTAGGGATGCGAGGTCAATGGTCTAACGACACGGCATGCACGGATGA
GTACACCCATCTATCTGCTAACCCCTCCGCCGTACATACATCGCAATCAC
GGCACCACGGACATGCCGAGACTTGAGCACGCCACGACCGGTACATCATT
GATCAGCTGATCGTTTCCAAGGCTGCCACCTCTAAGTGCCAAGGGAAGTA
AACCTGTAACAAGACTAAAACCGGGAGGGGCTGGAGCTACACGCGGGTTG
CCCCAAATCTAGGGCCATCCTACCCTTCCGCGGGGATGTTTCCCCGTCCC
CTCATCTCCTCATTATGCAAATACACGCCTGGCCGCAGGAAACCCTTGAG
GAAGCGTAACACCTCNGCGTAACCCCCCCCCCCCCCCCCCAGTGCTTCGC
GCCCCTACCAACGCAGGCTAACCTCTGTGGGGAACACATGCGGTTTCCAT
GCTATCTGCAGCAAAAGAATGCCTCAGGCGCACAATCACAAAACTAGTCG
ATTTTGTATGCTTCAACCAGGCGCGGCAGTAGATTGCAAGAGTATATGCT
GCTAGCCGTACCAAAAAGTACACTTGAATTAGTATTTATATCCTCTGTCT
GTCTGTCTGTCTGTCTGTTTGTCTGTCTGTTT back to topprotein sequence of EsuBft3854_3a-0001 >EsuBft3854_3 ID=EsuBft3854_3|Name=EsuBft3854_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=23bp
MEIGAAALCSGWYVRWEGQGNRE back to topmRNA from alignment at Scaffold_235:161724..165537- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3854_3a-0001 ID=EsuBft3854_3a-0001|Name=EsuBft3854_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3814bp|location=Sequence derived from alignment at Scaffold_235:161724..165537- (Ectocarpus subulatus male Bft15b)
ATGGAAATAGGAGCAGCGGCGTTGTGTTCAGGGTGAGTGCCCGTCGGGGG
GACTCACTGTGTAGCCGCAGTCGGGGTTGCGTGTGCCTATGCTGGGCGTA
GTTCCGAGGTGCTCGTCCAATTTGTTTTGAGTGGGATTGGTGTACATCGC
ACTTCAGGTGGTATGGTATATGCAGGACGCATGTTGTTGGGTGTATCGGA
CCGTTGCATGGTTGGGGGAGTGCACTCCTGGCTGCTGTGTGTGGCTATCT
TGGTGCTGCGCGCCTCCCAGTTACGTGCGTGACGAGTCTGATTGATTGGT
GGATACGCATACATATTATATGGCTTATATGTGGGTGTCCTGGTGTCCGG
GTACATGCGTGTTTTTCTGCAGTGCGATGGGAAGGTCAGGGGAACAGAGA
GTAGCGAGAGACGAGAATGTTTTTTTTCTTTGGTGGCCCGGGTGTTTCGC
CAAATGGCAATACTAATGTTGATGGGCCTAGTGGGGTTCTCTCGTGGTTT
CAGTATGAACAAGCCGGTGTGGTACTATCAGCGGCTTTGGGGGGCAGACA
GAGTTTATATGAATGTCTGTCTGTTTGGTGGCTGATGTTTATACTGATCG
TAAGGAGTAGACCGGGGGCGTGTGTGGTGTTGCCCTGCCTGGTCTCCGCT
CTTTTCCCCTCCCCCTTGGCGAGCAAAGGGGGTACGCAAAATAATAATGA
CAAATTTCGAAAGCATCGAGAAAAGCGAAAGATTGTCTGACGAAGTAAAG
GAAATCTGCGTTTTGTGAGAAGCGGCAGAAATAAACCTTGGCCAATCAGA
AAGCAGGAAGCGGACGAGCGTGTTGGTGTTCTGTTTTCAGTCTACTCGCT
TCGCCGTGTTTACCGGGGGCGAGCGAGAGCACGTGTGCGTGTGGTGGCCA
AGGGTTGTTTTCTGCTGTGACGTTTCTATTTCCCACCCACCCACCCTTGC
TTTTGGGGGTGTCAGTGGACATGGAAATAGGAGCAGCGGCGTTGTGTTCA
GGGTGAGTGTCCGTCGGGGGGGACTCACTGTGTAGCCGCAGTCGGGGTTG
CGTGTGCCTATGCTGGGCGCAGTTCCGAGGTGCTCGTCCCATTTATTTTG
AGTGGGATTGGTGTACATCGCACTTCAGGTGGTATATGCAGGACGCATGT
TGTTGGGTGTATCGGACCGTTGCATGGTTGGGGGAGTGCACTCCTGGCTG
CTGTGTGTGGCTATGTTGGTGCTACGCGCTTCCCCGTTACGTGCGTGACG
AGTCTGATTGATTGGTGGATACGCATACATATTATATGGCTTATATGTGG
GTGTCCTGGTGTCCGGGTACATGCGTGTTTTTCTGCAGTGCGATGGGAAG
GTCAGGGGAACAGAGAGTAGCGAGAGACGAGAATGTTTTTTTTCTTTGGT
GGCCCGGGTGTTTCGCCAAATGGCAATACTAATGTTGATGGGCCTAGTGG
GGTTCTCTCGTGGTTTCAGTATGAACAAGCCGGTGTGGTACTATCAGCGG
CTTTGGGGGGCAGACAGAGTTTATATGAATGTCTGTCTGTTTGGTGGCTG
ATGTTTATACTGATCGTAAGGAGTAGACCGGGGGCGTGTGTGGTGTTGCC
CTGCCTGGTCTCCGCTCTTTTCCCCTCCCGCTTGGCGAGCAAAGGGGGTA
CGCAAAATAATAATGACAAATTTCGAAAGCATCGAGAAAAGCGGTGCTCA
TCATCCACGCCGGCCGGCGTGCGTGCGCAAGGACTTGCGCACAGAATTTG
CGCGCAAGCGATAAATAACGCCTCCAGAACTACCCTTACAGAACCATTTT
GAATTCGTCCAGCGCACACACAAACGGCTCAACGGCACAGCAGCATACGC
TGCGCTCTCTTCAGCGCTGCGTACCCTGACCCACAAGGAAGGACTGATGA
TGCGGTGAACGTCTTCAGCCTTTTTTCTTTTTAATATTTCTCGAGAGAAG
GGAAGGGCAATGATCTGCCCTCCTAGTCCTTCGAAGTATTTACAGAGGAT
ACATACGACGTCTGCACTTGTACCTTCTGTGAGCAAAAGTTATTGGTAGG
TCAACAAACGACTGCTGACAATAATTCCCAGTCTCTTGTCCCTACTTTTT
GTGCGGCTTCACAAAACTGAGTTATCTCTTTCATGCACAAGAAGACGAGA
TTTCAGGACAACAAATACCAACGTGGATTACCACAGACACAAACCACACG
ACACCTTGTTGAGATCTCAAACAAAATGCAGCACAGCAATCGTTTCTGCG
CGCGAGTATCGTGGAGTACAGCATGGCGCGCGGAAATAACTACAACATCG
TCGTTGTTCCTAAGAACCACTGCGTAGTAGTCTAATTGTTTCGGGGGCCA
AGTTCACAAGGCATTGCCCCCAACATGAACCTGCCNCCCCCCCCCCCCCC
CCCCCCTCCTCTGCCCAGCCTCAAGCTCCGCACATGCAATAAATTTTTTG
TTTGGCAAGCGCACATCCCGCCACTCCCACCTTACACAAACTTCCACCAC
ACATAGGCTCGCGCACCGGCAAAATCTATCGTAAAGGTACCGGCGGGACG
CCCCCTTCCCCAACCCTGACTCCGTCACAGGGTGACACACATCCGTCCAT
CCGTCAAAGGCTTACTTCCGAAATAGTTTACACACCACAATCCTTCAACA
ACAAGCAATTCAAGGGTTCGGTTCAGGGCCACCTCCCCCATAGGCTTTGC
TGTTGCTCCTGCTGCTGACGGTGTTTCCTCGAGGTGATTCGAATGGGCAT
CACTGCCAATCGAGATCGGTGCAGCAGTAGTACGCGGAAACAACCTGAGC
AAAGCAGAATGTTCGGCTCTTTTTTGCCACCCCATCTATCTCCTCCCCCC
CGGTGTTTGCCATCGGGGTTGGGTGTTCGTCGCTTGGCAACGACGTTGTA
AAACAAACAAGCCAATTCACTTCGTGAACTCGGTAACCAGGTTACCGTTT
TTTTCTTACCTCTTTTGTTTGGCGGTAACCATAATGGTGGTCGAATAGAT
CATGTTGTGTGGGGTGGACAATCTTCACTCCGCGCAAGGGGGATGATCGC
ACCACGTTGCGTTAAAATGGTCAAGCACCCTCGAGGCAGTTACACAGCAC
TGCTTACAACTTTCTTNCGGAGCTTCTCGCTTGGTGATGTGAGAGCCTGG
TCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGT
CAATGGTCTAACGACACGGCATGCACGGATGAGTACACCCATCTATCTGC
TAACCCCTCCGCCGTACATACATCGCAATCACGGCACCACGGACATGCCG
AGACTTGAGCACGCCACGACCGGTACATCATTGATCAGCTGATCGTTTCC
AAGGCTGCCACCTCTAAGTGCCAAGGGAAGTAAACCTGTAACAAGACTAA
AACCGGGAGGGGCTGGAGCTACACGCGGGTTGCCCCAAATCTAGGGCCAT
CCTACCCTTCCGCGGGGATGTTTCCCCGTCCCCTCATCTCCTCATTATGC
AAATACACGCCTGGCCGCAGGAAACCCTTGAGGAAGCGTAACACCTCNGC
GTAACCCCCCCCCCCCCCCCCCAGTGCTTCGCGCCCCTACCAACGCAGGC
TAACCTCTGTGGGGAACACATGCGGTTTCCATGCTATCTGCAGCAAAAGA
ATGCCTCAGGCGCACAATCACAAAACTAGTCGATTTTGTATGCTTCAACC
AGGCGCGGCAGTAGATTGCAAGAGTATATGCTGCTAGCCGTACCAAAAAG
TACACTTGAATTAGTATTTATATCCTCTGTCTGTCTGTCTGTCTGTCTGT
TTGTCTGTCTGTTT back to topCoding sequence (CDS) from alignment at Scaffold_235:161724..165537- >EsuBft3854_3a-0001 ID=EsuBft3854_3a-0001|Name=EsuBft3854_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=72bp|location=Sequence derived from alignment at Scaffold_235:161724..165537- (Ectocarpus subulatus male Bft15b)
ATGGAAATAGGAGCAGCGGCGTTGTGTTCAGGGTGGTATGTGCGATGGGA
AGGTCAGGGGAACAGAGAGTAG back to top
|