Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft3745_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 99 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3745_3a-0001 ID=EsuBft3745_3a-0001|Name=EsuBft3745_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=999bp|location=Sequence derived from alignment at Scaffold_265:180555..181782- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAACTCGACCAAGAGAGGGTCTACTGCCTGCAGCAGTTGGTTCATGA
CGGATACACGCTGCGCGACAAGCTCAGCATCCAGCGACAGAAGCCACGAA
AGGATCGGTTAGTGCTGCACTCAAGGTCGCGAGCCAACAATACTGAGTTG
AAATGGCGGCGCCGCTGGATCACGTCTGGGAAGCCACGCGGCCGCGACGC
CGTCGCGGAGGGAATCATCATAGACGAGGTGACTGCTGCTGACTGGGATN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCAACAG
CACCCGCAGTTCGAGCCGCAGCGCCAGCCGTTGGTTCACTTCAAGAACTC
CGGTCTCGCAGGAGGATACAAGTTTTTGCTGGAGCTCGACGAAGGCGTCT
TCAAGCTCGCGAAAGGCTGGGTGCTCGAGAACTGCGGGATACTCAGTGGG
CAAGCCAATAAAACGGTGGAGGATTTCCGCAAGTGGGTGAACAGCACCAT
CATGCCGATGCTGGAGGAGCAGGAAAAGGACGGCATCAACGCTTTCCATG
GATTGAAAGTAAAGCTGGTGGAAAGGAAGGAGAACGAGCCGCCAAAGCGC
CAAATCTCCCTTTCTACGGCAACGGAGTGGCTGAAGAAGATAGAATGCGA
ATACCACGACGGCAAAAAGGGGCTGTACTTCGATGGCCACGACGACAAGA
AGACCCTTGAATACCGGCACGACGAGTTCCTCCCGGCGCTGTTCGACACC
CGCGACTACATGGAGGTATGGATTCCGATGGGCAAGGATGAAGCGATCGT
CTGGGGTGTTGACGTCGAGACGGTGGAGGAGACCGAGCGCTTGCCGGATG
GTGGTGTCTGGGTTTGTGTCGATGATCTCGAGTCTGCGCTGGCAGACTTG
CCCGAAGACCTGCAAGCCAGAGTGCAGAGCAAGAAAACCTACCCTGACGA
GAGGCGGGCCATGCTTCTCTACCAGGACGAGAGCATATTTCGAGGCTAG back to topprotein sequence of EsuBft3745_3a-0001 >EsuBft3745_3 ID=EsuBft3745_3|Name=EsuBft3745_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=332bp
MELDQERVYCLQQLVHDGYTLRDKLSIQRQKPRKDRLVLHSRSRANNTEL
KWRRRWITSGKPRGRDAVAEGIIIDEVTAADWDXXXXXXXXXXXXXXNQQ
HPQFEPQRQPLVHFKNSGLAGGYKFLLELDEGVFKLAKGWVLENCGILSG
QANKTVEDFRKWVNSTIMPMLEEQEKDGINAFHGLKVKLVERKENEPPKR
QISLSTATEWLKKIECEYHDGKKGLYFDGHDDKKTLEYRHDEFLPALFDT
RDYMEVWIPMGKDEAIVWGVDVETVEETERLPDGGVWVCVDDLESALADL
PEDLQARVQSKKTYPDERRAMLLYQDESIFRG back to topmRNA from alignment at Scaffold_265:180555..181782- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3745_3a-0001 ID=EsuBft3745_3a-0001|Name=EsuBft3745_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1228bp|location=Sequence derived from alignment at Scaffold_265:180555..181782- (Ectocarpus subulatus male Bft15b)
ATGGAACTCGACCAAGAGAGGGTCTACTGCCTGCAGCAGTTGGTTCATGA
CGGATACACGCTGCGCGACAAGCTCAGCATCCAGCGACAGAAGCCACGAA
AGGATCGGTTAGTGCTGCACTCAAGGTCGCGAGCCAACAATACTGAGTTG
AAATGGCGGCGCCGCTGGATCACGTCTGGGAAGCCACGCGGCCGCGACGC
CGTCGCGGAGGGAATCATCATAGACGAGGTGACTGCTGCTGACTGGGATN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCAACAG
CACCCGCAGTTCGAGCCGCAGCGCCAGCCGTTGGTTCACTTCAAGAACTC
CGGTCTCGCAGGAGGATACAAGTACGGAAGACAGCTGTTTATCTAACTTT
CAGCTGGCGCACACGGTGTAAGCGGCCATGACATTGATCCAGTTGTACAC
CCAGCAGGCCGACGGCTTCGACCGGAAGGATGCACTGGCCATCGCAGCAG
AGGTTGGACGGAGAACCGTTCAAACAGTACAGCAGTGGGAGCGGGATTTC
ATCGCCCACGGACGCATAAAAAAACCTGACACAGGTCGCTTCAAGCGCAG
GTTTTTGCTGGAGCTCGACGAAGGCGTCTTCAAGCTCGCGAAAGGCTGGG
TGCTCGAGAACTGCGGGATACTCAGTGGGCAAGCCAATAAAACGGTGGAG
GATTTCCGCAAGTGGGTGAACAGCACCATCATGCCGATGCTGGAGGAGCA
GGAAAAGGACGGCATCAACGCTTTCCATGGATTGAAAGTAAAGCTGGTGG
AAAGGAAGGAGAACGAGCCGCCAAAGCGCCAAATCTCCCTTTCTACGGCA
ACGGAGTGGCTGAAGAAGATAGAATGCGAATACCACGACGGCAAAAAGGG
GCTGTACTTCGATGGCCACGACGACAAGAAGACCCTTGAATACCGGCACG
ACGAGTTCCTCCCGGCGCTGTTCGACACCCGCGACTACATGGAGGTATGG
ATTCCGATGGGCAAGGATGAAGCGATCGTCTGGGGTGTTGACGTCGAGAC
GGTGGAGGAGACCGAGCGCTTGCCGGATGGTGGTGTCTGGGTTTGTGTCG
ATGATCTCGAGTCTGCGCTGGCAGACTTGCCCGAAGACCTGCAAGCCAGA
GTGCAGAGCAAGAAAACCTACCCTGACGAGAGGCGGGCCATGCTTCTCTA
CCAGGACGAGAGCATATTTCGAGGCTAG back to topCoding sequence (CDS) from alignment at Scaffold_265:180555..181782- >EsuBft3745_3a-0001 ID=EsuBft3745_3a-0001|Name=EsuBft3745_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=999bp|location=Sequence derived from alignment at Scaffold_265:180555..181782- (Ectocarpus subulatus male Bft15b)
ATGGAACTCGACCAAGAGAGGGTCTACTGCCTGCAGCAGTTGGTTCATGA
CGGATACACGCTGCGCGACAAGCTCAGCATCCAGCGACAGAAGCCACGAA
AGGATCGGTTAGTGCTGCACTCAAGGTCGCGAGCCAACAATACTGAGTTG
AAATGGCGGCGCCGCTGGATCACGTCTGGGAAGCCACGCGGCCGCGACGC
CGTCGCGGAGGGAATCATCATAGACGAGGTGACTGCTGCTGACTGGGATN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCAACAG
CACCCGCAGTTCGAGCCGCAGCGCCAGCCGTTGGTTCACTTCAAGAACTC
CGGTCTCGCAGGAGGATACAAGTTTTTGCTGGAGCTCGACGAAGGCGTCT
TCAAGCTCGCGAAAGGCTGGGTGCTCGAGAACTGCGGGATACTCAGTGGG
CAAGCCAATAAAACGGTGGAGGATTTCCGCAAGTGGGTGAACAGCACCAT
CATGCCGATGCTGGAGGAGCAGGAAAAGGACGGCATCAACGCTTTCCATG
GATTGAAAGTAAAGCTGGTGGAAAGGAAGGAGAACGAGCCGCCAAAGCGC
CAAATCTCCCTTTCTACGGCAACGGAGTGGCTGAAGAAGATAGAATGCGA
ATACCACGACGGCAAAAAGGGGCTGTACTTCGATGGCCACGACGACAAGA
AGACCCTTGAATACCGGCACGACGAGTTCCTCCCGGCGCTGTTCGACACC
CGCGACTACATGGAGGTATGGATTCCGATGGGCAAGGATGAAGCGATCGT
CTGGGGTGTTGACGTCGAGACGGTGGAGGAGACCGAGCGCTTGCCGGATG
GTGGTGTCTGGGTTTGTGTCGATGATCTCGAGTCTGCGCTGGCAGACTTG
CCCGAAGACCTGCAAGCCAGAGTGCAGAGCAAGAAAACCTACCCTGACGA
GAGGCGGGCCATGCTTCTCTACCAGGACGAGAGCATATTTCGAGGCTAG back to top
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