EsuBft3723_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft3723_3a-0001
Unique NameEsuBft3723_3a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_647contigScaffold_647:198023..202358 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LNG5
ProteomeIdEsuBft3723_3
Protein domainsIPR000209
Protein domainsIPR015500
Protein domainsPTHR10795
Ownerapollo_admin@sb-roscoff.fr
Noteserine protease abc transporter b family protein tagd os:dictyostelium discoideum gn:tagd pe:3 [Automatic annotation]
Nb exon7
Max annot lvl2759|Eukaryota
Length1764
Hectar predicted targeting categoryother localisation
Evalue2.94e-60
EggNOG OGsCOG1404@1|root,KOG1114@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Descriptiontripeptidyl-peptidase activity
COG categoryO
Cross References
External references for this mRNA
DatabaseAccession
GO0004252
GO0006508
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft3723_3aEsuBft3723_3aEctocarpus subulatus male Bft15bgeneScaffold_647 198023..202358 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft3723_3a-0001EsuBft3723_3Ectocarpus subulatus male Bft15bpolypeptideScaffold_647 198023..202154 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft3723_3a-0001-exonagat-exon-30797Ectocarpus subulatus male Bft15bexonScaffold_647 198023..198031 +
EsuBft3723_3a-0001-exonagat-exon-30799Ectocarpus subulatus male Bft15bexonScaffold_647 198687..198970 +
EsuBft3723_3a-0001-exonagat-exon-30795Ectocarpus subulatus male Bft15bexonScaffold_647 199261..199493 +
EsuBft3723_3a-0001-exonagat-exon-30796Ectocarpus subulatus male Bft15bexonScaffold_647 200354..200925 +
EsuBft3723_3a-0001-exonEsuBft3723_3a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_647 201130..201492 +
EsuBft3723_3a-0001-exonagat-exon-30798Ectocarpus subulatus male Bft15bexonScaffold_647 201813..201861 +
EsuBft3723_3a-0001-exonagat-exon-30800Ectocarpus subulatus male Bft15bexonScaffold_647 202105..202358 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft3723_3a-0001-cdsEsuBft3723_3a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_647 198023..198031 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft3723_3a-0001-exonagat-three_prime_utr-14288Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_647 202155..202358 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft3723_3a-0001 ID=EsuBft3723_3a-0001|Name=EsuBft3723_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1764bp|location=Sequence derived from alignment at Scaffold_647:198023..202358+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCACAGGTCAATTCCAAGCCTGCTGACTATCCGGTGCAATTTTCCAC
CCCCTACAAATGCAACGGTTGCAATGTTGTGACATATCGTGCAGTACATC
CAGCTGTCAAGACGCCCGACCAAGGCAGCACTTCTAGCGGGCAAGACTCT
TTCACCTACTTCAGCGACTACTTTGGCGATCCCTACGACTACGATGACAG
CGAGTACATATCGCACGATGACTACAGCGGGGAGTATTTCTCCGATACAG
TCGTCCCCGCTTTAAAGACGCTCATCTTAAGTCAACTCCCCGCCGCCACG
GACTCTAGATCCACGGCGCGAGTGTTGACGGACAACTTGTTCGTCGAGAA
AGCCTCAGGCCTCACGGACGCTGAAGTGCGTCAGGCAGTAAAGACGTGGC
TTAGTGTAGAGGACGACCCAGAGGTGTTGGAGGAAGAAATAGCAATGGAA
CTGCAGGCTGTAGACGAGCAACTGGCCGGCGTAACCCTCGATGACGATGT
ACCCAGCGAAGAGGAAGACGACGACGGAGGTCTTGACGATTTGGCGTACC
ACTTGAGCTACCTCTATGATGATACTTCGTACGCCTCTTCTTCCACTTCA
CCGTCCTTCACCGGTGGGTTCCACAAAGACACTATTGGTGGCCACGGCAC
GTCGACGGCCGGTAGCGCGGCGGGGGCTATTTCGTCCCAATCCAGTCTCG
AAGAAGAGGCTTGCTACGGCGACGAGCTTCCTGCGTGTGCCGGTGGCTGC
ATATCGGCTTCAGACGTCGAAGCCATGCTCGACGATAGCACTTTCGACCT
CGACGTCTTCTGCCCCATGTACACCTGCGACGGGAATACCGATATTCCTT
CCTCCGAATGCCTCAGCGACGATCCAGTTGAAAATCTGCATCAACACGGC
GGTGCAGCCCCCGGGGCACAGATCTCCGTGTTTGACGTTTCGTACGTAGG
AACCGAAGTTTATGCTTCATGGGCGGGAAACGATTTGTGGTACTCGGCGA
TGGAGACGGGTGCGAAAATCCACACCAACTCATGGGGTGGAGCTACGCTT
TGCCAACTCACCGAGAAGGAGTATATGTACGACATGTTTATGTATGAGAA
TCCCGAGCACCTGTTGATCTTCTCTGCGGGAAACGACGGCGGGTATGAAG
ACATCCCCAACCGCGAGGCCTGCACAGTTGGATCTCCTGCCCTCGGCAAG
AACAGTCTAGCTGTGGGAGCCACGTCCTCTGGTCCCTTTCCAGGAACCCG
AACCGGAGACGACGGGAACTTGTTTTACGAGGAGGTCGGCCTGACCGACT
ATTCTCCCGAGGGATACCCCTGGATTTGCTTGATGCCTTATCTGGGGACG
CCGTCCGCATCGACGGAGCCAGCGGGGGTCGATACTGTCGCGTATTTCAG
CTCCCAGGGTCCTACCCTAGATGGGCGAATCAAGCCTGACGTCGTTGCTC
CCGGGGATCAGGTGGCCTCCGCATCAAGTGACGGGACCGATGAGCACAGC
TGCAAACTGGCGGGACCTCCGCTTCCTGCCCCCTGGTTGCCGGTGCCGCT
GCCCTGGTAATTTCACACATGAAGCAAAGTGCAGATATGCGAGTTGGCTG
CCGTTGGTGATCGATTGTACTGCAACGTGGTAGGATATTTACGCTTGCTG
CCCCATGTACCACTCTGCGTTTGACGTCCCACCTTCTGACCAAATTGGTG
TGCTGCCCTGGAGTCTCAACCTTTGATTTCTGATGTGTTGTTCGATAGGT
TCGGCAGTACTTCA
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protein sequence of EsuBft3723_3a-0001

>EsuBft3723_3 ID=EsuBft3723_3|Name=EsuBft3723_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=519bp
MSQVNSKPADYPVQFSTPYKCNGCNVVTYRAVHPAVKTPDQGSTSSGQDS
FTYFSDYFGDPYDYDDSEYISHDDYSGEYFSDTVVPALKTLILSQLPAAT
DSRSTARVLTDNLFVEKASGLTDAEVRQAVKTWLSVEDDPEVLEEEIAME
LQAVDEQLAGVTLDDDVPSEEEDDDGGLDDLAYHLSYLYDDTSYASSSTS
PSFTGGFHKDTIGGHGTSTAGSAAGAISSQSSLEEEACYGDELPACAGGC
ISASDVEAMLDDSTFDLDVFCPMYTCDGNTDIPSSECLSDDPVENLHQHG
GAAPGAQISVFDVSYVGTEVYASWAGNDLWYSAMETGAKIHTNSWGGATL
CQLTEKEYMYDMFMYENPEHLLIFSAGNDGGYEDIPNREACTVGSPALGK
NSLAVGATSSGPFPGTRTGDDGNLFYEEVGLTDYSPEGYPWICLMPYLGT
PSASTEPAGVDTVAYFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDEHS
CKLAGPPLPAPWLPVPLPW
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mRNA from alignment at Scaffold_647:198023..202358+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft3723_3a-0001 ID=EsuBft3723_3a-0001|Name=EsuBft3723_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4336bp|location=Sequence derived from alignment at Scaffold_647:198023..202358+ (Ectocarpus subulatus male Bft15b)
ATGTCACAGGTACGCGCGCGAACCGTGCGTTCTCTTACATCCTTGCAGAC
TTCTGGCGGTGTTGCTGGAAAGGAACTCTTGATTGAGACCGTGCGCATTT
ACCAGCAACACAGATCATACACACCAGACCCTATCGACACATGTACCCAA
CGCACAATCGACGCAGTTTTCTTTGACAGCGACACAGCGGTGGGTTGATT
GCCTGTCTTTAGCAAAGTGGACTCTAACGATGTGTTCACCAGTGTGTTAC
CGGTCTGTTGTTCACTCATCGCCCAACTCGAACGTTGACCCTTTCCGCGT
AATGTATGTGCACCAGATGGGCACCAACGGACATTTGGTGATATACGCCG
AACGATTTCTGTTGTAGTGTGACCGCGTTCAAGCCCACTTTGTTGCGATA
AGCCAAATATGTGGCATGGTATTTCTATTGCTCCGTTCACGGCAAAAATG
CACACTCTCGATGAGGTCGGTGGCATTGCGCTCCTGTGCGAACGTTGAAG
GAAGGTGCTCCATAAATTCGCTATTCTTGCATCCTCAAGTTAACTCCCAG
TCCTCGTGCGAAGGAAGAAAGTAGCCCATGCTCAACAAACATGGTAAACG
TCGTGCGTGCGTCATGCAGGGCGCAGTTCTCTGCTAGAAGAGACTTCGCC
CCCTCCCTTATCAGGTCAATTCCAAGCCTGCTGACTATCCGGTGCAATTT
TCCACCCCCTACAAATGCAACGGTTGCAATGTTGTGACATATCGTGCAGT
ACATCCAGCTGTCAAGACGCCCGACCAAGGCAGCACTTCTAGCGGGCAAG
ACTCTTTCACCTACTTCAGCGACTACTTTGGCGATCCCTACGACTACGAT
GACAGCGAGTACATATCGCACGATGACTACAGCGGGGAGTATTTCTCCGA
TACAGTCGTCCCCGCTTTAAAGACGCTCATCTTAAGTCAACTCCCCGCGT
TAAAGACGAAAAAAATTCCGAACCATGGTGCCCCGCAGATATACAATATG
AGGGGGGGGGTGTACTTTATATACTGCGGGGCCCCCCAGAAAATCGTGCA
GCACACCTGTAGAACTGCACAGAGAGCGGTCTGCCACTGCTGATGCTGCT
GCTGCAACCGCTACTGCGTGGATATGGATAGATTCCTTTCGTCTGCTGAC
GGTCCGTCTGCCGCCCACACGACAACGTGTGGTGAGCCATCATCGACGAC
CTCTGCGAAATGGTCTCCAAGATGTCTATGCCAGCCAGCGCCACGGACTC
TAGATCCACGGCGCGAGTGTTGACGGACAACTTGTTCGTCGAGAAAGCCT
CAGGCCTCACGGACGCTGAAGTGCGTCAGGCAGTAAAGACGTGGCTTAGT
GTAGAGGACGACCCAGAGGTGTTGGAGGAAGAAATAGCAATGGAACTGCA
GGCTGTAGACGAGCAACTGGCCGGCGTAACCCTCGATGACGATGTACCCA
GCGAAGAGGAAGACGACGACGGTAGGTCAGAGTCGTGCGTGACAACGTCG
CTTACAGAGGCCGACGTCCGCTTTCGCCTCGAGGAGTGCCGCTCCTTTTT
GAATGCGAAAGGGAAGGACGGCGAGTACAGCGAAACGCTGTACCTTCTTT
CGAGGACTGTGCATTCGTTCACTCACGAAACTCAAGTCAACCGAAGAGCG
AAGCAGGGGGGTGAGGTGCAGGCCACTCTTGGCGATATGTGGGGGCGATA
GTTTTTTTTTTCGGAGGGCATACAGCGATGGGCTCTTTTTTTTTATTGCT
TCATCTTCACCGATAATTTAGCGTTGATGTCCATCTGAGTTTCGTGTGTA
GGGTGTTTGTGTCTCTATCGCTTAGGATATACTGAAGTATCGTGTCAAAG
TTGGAACCGCTGTGGTGAAGGATGTGTCGGTGAGGTTTTCAACATCAGGA
AAACGAGAAGAAAATAAAAACAACACAGCAGGCAGCAGTCGCCACACAAC
CGAGAGAGTGCACTGCAGTCATAACAAAACTATATCCCGCAACAACCCAC
ATGTCGGGAGCATATTATTGCGGGCGGTGGCGCGGTAACTTAAAACATGG
TTTATAATATATAAATATATATATATAGTGCATTCCACTTTCAACCACGG
CTACGTTGTGAGCGGTCAGATTTATGGATCCTCGTTTCGTTATAAGTTAC
GTGTTGCAACGGCGCGTCTTTTGATGTATGTTATGCCTCCATCGGCCCCG
GGGGTGGTGCGTTATCGTCCCCGGAATCTTAAAGACGATTCCCCGCGTTA
AAGACGCTTTGAAAAAAAAAAACGCTATGCGTCTTTAAAGCGGGGACGAC
TGTACTTGGAGCGAGGACTCCTTCTGTGCAGGAGGTCTTGACGATTTGGC
GTACCACTTGAGCTACCTCTATGATGATACTTCGTACGCCTCTTCTTCCA
CTTCACCGTCCTTCACCGGTGGGTTCCACAAAGACACTATTGGTGGCCAC
GGCACGTCGACGGCCGGTAGCGCGGCGGGGGCTATTTCGTCCCAATCCAG
TCTCGAAGAAGAGGCTTGCTACGGCGACGAGCTTCCTGCGTGTGCCGGTG
GCTGCATATCGGCTTCAGACGTCGAAGCCATGCTCGACGATAGCACTTTC
GACCTCGACGTCTTCTGCCCCATGTACACCTGCGACGGGAATACCGATAT
TCCTTCCTCCGAATGCCTCAGCGACGATCCAGTTGAAAATCTGCATCAAC
ACGGCGGTGCAGCCCCCGGGGCACAGATCTCCGTGTTTGACGTTTCGTAC
GTAGGAACCGAAGTTTATGCTTCATGGGCGGGAAACGATTTGTGGTACTC
GGCGATGGAGACGGGTGCGAAAATCCACACCAACTCATGGGGTGGAGCTA
CGCTTTGCCAACTCACCGAGAAGGAGTATATGTACGACATGTTTATGTAT
GAGGTGAGTACGATCATGCCCAAGTTCACGCGCGCGCCGGTTCGTCATAC
TGAACTGTGCACGCAGTTGTTATTTCAAGTGTGGGACATGTACATGCTAG
CTTCGGCCATCGCTGCTAGCTCGCAATAAGCGTGGAGATTACCAATCGGA
TTTCCAACATTACCGCGGCCGCCACCCCGCCCCTCTCTTGTTTTCACGTT
CTTGCAGAATCCCGAGCACCTGTTGATCTTCTCTGCGGGAAACGACGGCG
GGTATGAAGACATCCCCAACCGCGAGGCCTGCACAGTTGGATCTCCTGCC
CTCGGCAAGAACAGTCTAGCTGTGGGAGCCACGTCCTCTGGTCCCTTTCC
AGGAACCCGAACCGGAGACGACGGGAACTTGTTTTACGAGGAGGTCGGCC
TGACCGACTATTCTCCCGAGGGATACCCCTGGATTTGCTTGATGCCTTAT
CTGGGGACGCCGTCCGCATCGACGGAGCCAGCGGGGGTCGATACTGTCGC
GTATTTCAGCTCCCAGGGTCCTACCCTAGATGGGCGAATCAAGCCTGACG
TCGTTGCTCCCGGGGATCAGGTTAGAGCGTATTTCGCGATGGCAATCTGT
CGCCGTGTTTGTGAAATTTCGCAATTGTCTGCCGGCTATTGTAGCTTCTC
CCACAACACGCCGTAGAGGTGAAATCGCAAGACGATCGGATAGCACCCAT
GCTGCGTAGGCACGAGTTTGTTTTGGCAAGACCATTACGGGTGGTGGATG
TGTCATCACCCGCAAGGCACACATGTGGCTGATGTCCCCTATGTGGTTTG
TGCCGATGTCGAGTAAGCTTTCAATACACATCCGTAGCCCGTACTTTGGA
CAAGTTCGATGACAGTCTCTCTTTCCCTCTTCTCGCGCAGGTGGCCTCCG
CATCAAGTGACGGGACCGATGAGCACAGCTGCAAACTGGGTAAGTCGAGC
ACCACCTGCTACATACTCCCAACCGTTGCCGCGATGGTATCTCAAATGCT
TTACTCACTAGCGGTTGCATCGCAGATTTCGCAGAACAGGAAGGCTTTGC
GAGCAACAGCCCACACCCTGGACACCTCCAGTTTACCACATTTGAACACT
GACAACGACCCTCTTCATCCCTTCCCTTTCTCCTCTTGTCGTTGTTCGTC
TCTTTCACCCACGCATGTTCAGTCGCCTATAGCGGGACCTCCGCTTCCTG
CCCCCTGGTTGCCGGTGCCGCTGCCCTGGTAATTTCACACATGAAGCAAA
GTGCAGATATGCGAGTTGGCTGCCGTTGGTGATCGATTGTACTGCAACGT
GGTAGGATATTTACGCTTGCTGCCCCATGTACCACTCTGCGTTTGACGTC
CCACCTTCTGACCAAATTGGTGTGCTGCCCTGGAGTCTCAACCTTTGATT
TCTGATGTGTTGTTCGATAGGTTCGGCAGTACTTCA
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Coding sequence (CDS) from alignment at Scaffold_647:198023..202358+

>EsuBft3723_3a-0001 ID=EsuBft3723_3a-0001|Name=EsuBft3723_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1560bp|location=Sequence derived from alignment at Scaffold_647:198023..202358+ (Ectocarpus subulatus male Bft15b)
ATGTCACAGGTCAATTCCAAGCCTGCTGACTATCCGGTGCAATTTTCCAC
CCCCTACAAATGCAACGGTTGCAATGTTGTGACATATCGTGCAGTACATC
CAGCTGTCAAGACGCCCGACCAAGGCAGCACTTCTAGCGGGCAAGACTCT
TTCACCTACTTCAGCGACTACTTTGGCGATCCCTACGACTACGATGACAG
CGAGTACATATCGCACGATGACTACAGCGGGGAGTATTTCTCCGATACAG
TCGTCCCCGCTTTAAAGACGCTCATCTTAAGTCAACTCCCCGCCGCCACG
GACTCTAGATCCACGGCGCGAGTGTTGACGGACAACTTGTTCGTCGAGAA
AGCCTCAGGCCTCACGGACGCTGAAGTGCGTCAGGCAGTAAAGACGTGGC
TTAGTGTAGAGGACGACCCAGAGGTGTTGGAGGAAGAAATAGCAATGGAA
CTGCAGGCTGTAGACGAGCAACTGGCCGGCGTAACCCTCGATGACGATGT
ACCCAGCGAAGAGGAAGACGACGACGGAGGTCTTGACGATTTGGCGTACC
ACTTGAGCTACCTCTATGATGATACTTCGTACGCCTCTTCTTCCACTTCA
CCGTCCTTCACCGGTGGGTTCCACAAAGACACTATTGGTGGCCACGGCAC
GTCGACGGCCGGTAGCGCGGCGGGGGCTATTTCGTCCCAATCCAGTCTCG
AAGAAGAGGCTTGCTACGGCGACGAGCTTCCTGCGTGTGCCGGTGGCTGC
ATATCGGCTTCAGACGTCGAAGCCATGCTCGACGATAGCACTTTCGACCT
CGACGTCTTCTGCCCCATGTACACCTGCGACGGGAATACCGATATTCCTT
CCTCCGAATGCCTCAGCGACGATCCAGTTGAAAATCTGCATCAACACGGC
GGTGCAGCCCCCGGGGCACAGATCTCCGTGTTTGACGTTTCGTACGTAGG
AACCGAAGTTTATGCTTCATGGGCGGGAAACGATTTGTGGTACTCGGCGA
TGGAGACGGGTGCGAAAATCCACACCAACTCATGGGGTGGAGCTACGCTT
TGCCAACTCACCGAGAAGGAGTATATGTACGACATGTTTATGTATGAGAA
TCCCGAGCACCTGTTGATCTTCTCTGCGGGAAACGACGGCGGGTATGAAG
ACATCCCCAACCGCGAGGCCTGCACAGTTGGATCTCCTGCCCTCGGCAAG
AACAGTCTAGCTGTGGGAGCCACGTCCTCTGGTCCCTTTCCAGGAACCCG
AACCGGAGACGACGGGAACTTGTTTTACGAGGAGGTCGGCCTGACCGACT
ATTCTCCCGAGGGATACCCCTGGATTTGCTTGATGCCTTATCTGGGGACG
CCGTCCGCATCGACGGAGCCAGCGGGGGTCGATACTGTCGCGTATTTCAG
CTCCCAGGGTCCTACCCTAGATGGGCGAATCAAGCCTGACGTCGTTGCTC
CCGGGGATCAGGTGGCCTCCGCATCAAGTGACGGGACCGATGAGCACAGC
TGCAAACTGGCGGGACCTCCGCTTCCTGCCCCCTGGTTGCCGGTGCCGCT
GCCCTGGTAA
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