Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft359_9 |
| Protein domains | IPR000571 |
| Protein domains | Coil |
| Protein domains | SSF90229 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 143 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0046872 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft359_9a-0001 ID=EsuBft359_9a-0001|Name=EsuBft359_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1438bp|location=Sequence derived from alignment at Scaffold_233:271760..273197- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCATTGGCAGCCCAGCAGGAACAGCAGAACCCACCGCCGCAGCAACA
GCAGCCGCCGCCGCAGCAGCCGCAGCAGCAGCAGCAGCAGCAGCAGACGC
AGCAACTTCAACGTCAGCAGCAAGAAGCGGCAGCTGGGGCCGCAGCCGTG
GCGGGTTCGGCGGTCGGCGGGGATGAGGCACGGCTGGCCGACGGCATGGC
TGGTTTATCCGTGGAGGGCCTCGGTGGGTCGTCTGCGGTGGCCGGGGGGG
ACAACCTGGGTGCCGGTGCGGCGTCGGGGGCGCCGGGTGCGTTGCAGCTT
GTGATGTCGCAGCAAGATAACGAGAATCTCGTTGCGAAAGTATCGGCTTT
GGAGCAATCCCTGCAGCAGTTGCTGAACAACCAAGGTGGGGGCGCCGGTT
CGCACGTGGTCGGCCCGCACGCTGCTGATGGGGCGGGAGCCGCGGCGGCG
GTCGGTGCGGGTCTTGGTGCAGCTGCTGCTCCGGGGTCGGACGCTGATCG
CCAGCGTCGCTTCGCAAAAGCGGAATTCGAGAGTACTGCTTCCGCTTGGC
GTGCGGGACGTTTGATGTGGGCGCTGCGTGGTAAGCGGGGAATTGACGTT
CCCAACAAAGAGACCCTGCAAACGATGATGGGGGGGACCGTTACCGGCAC
CGACAAGACTTTGCAGCAGCTTCGTACCATGTCCGGACTGAACGTCCTCG
ACTTCTTTCCCGTTGGAAATTCTGGTGAGCTGTCAGTCCCGGACCACTTC
GATTTGACCTGTGCTGCGATCGTTAACGTGTTGAAATCTGGTCTCGCTGC
CACCTCCGCGGACAACGCTGCAGCTCTGGCGCGCTTGCTGCCCATGGAGC
AGGCCATGCTTTCGGCGCGGGGTACGCTGCGCATGCAAGCCCTCCGTCAT
GTGGGTGACTTTCCGGGGAGGGGGTCGCGGGGGACCTTCGCCGACCTCCC
CAACGATGACTTTCGTGAATGGGCAAATGCGGTAATGTTGTGGATGTTAC
CGATTCAGAATTTGCCGGTGCCGCCGGAGTCTTTCGAGCGCTTTAACCCC
CCGCCGGTTCCTCGGTTCGACGGCATCAATGGCTTCTCCATGTCCGGGAG
CATTGCGCTACGGATGTTCGGGACTGTGGGTGGTGGAGGTTCTTCTGGAT
CGAGTGGGGGTAAGAGACGGCGGGGGGACTCCCGCTCCGCGGGTGGGGAC
TCCAAACGCCGGTCGAAAGTGTGTTTCGAATATCGCGACTCCCAAACATG
CAGGTGGGGCGACTCCTGCGTGTTCCGCCATGCGACTGGGGGCGGCAAGG
GTGGCGGCGGCGGTGGGGGTCGCGCTTCGGGTGGAGGGGGAGCCTCGGGC
GCCGCGACCGATGGCGGAAGCGGCTCCTCGGCGTTGGTCGTTCGCCGGGG
AGATGGCAGCAACTGAGGACACGGGCTCTGCCTTTCGG back to topprotein sequence of EsuBft359_9a-0001 >EsuBft359_9 ID=EsuBft359_9|Name=EsuBft359_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=471bp
MALAAQQEQQNPPPQQQQPPPQQPQQQQQQQQTQQLQRQQQEAAAGAAAV
AGSAVGGDEARLADGMAGLSVEGLGGSSAVAGGDNLGAGAASGAPGALQL
VMSQQDNENLVAKVSALEQSLQQLLNNQGGGAGSHVVGPHAADGAGAAAA
VGAGLGAAAAPGSDADRQRRFAKAEFESTASAWRAGRLMWALRGKRGIDV
PNKETLQTMMGGTVTGTDKTLQQLRTMSGLNVLDFFPVGNSGELSVPDHF
DLTCAAIVNVLKSGLAATSADNAAALARLLPMEQAMLSARGTLRMQALRH
VGDFPGRGSRGTFADLPNDDFREWANAVMLWMLPIQNLPVPPESFERFNP
PPVPRFDGINGFSMSGSIALRMFGTVGGGGSSGSSGGKRRRGDSRSAGGD
SKRRSKVCFEYRDSQTCRWGDSCVFRHATGGGKGGGGGGGRASGGGGASG
AATDGGSGSSALVVRRGDGSN back to topmRNA from alignment at Scaffold_233:271760..273197- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft359_9a-0001 ID=EsuBft359_9a-0001|Name=EsuBft359_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1438bp|location=Sequence derived from alignment at Scaffold_233:271760..273197- (Ectocarpus subulatus male Bft15b)
ATGGCATTGGCAGCCCAGCAGGAACAGCAGAACCCACCGCCGCAGCAACA
GCAGCCGCCGCCGCAGCAGCCGCAGCAGCAGCAGCAGCAGCAGCAGACGC
AGCAACTTCAACGTCAGCAGCAAGAAGCGGCAGCTGGGGCCGCAGCCGTG
GCGGGTTCGGCGGTCGGCGGGGATGAGGCACGGCTGGCCGACGGCATGGC
TGGTTTATCCGTGGAGGGCCTCGGTGGGTCGTCTGCGGTGGCCGGGGGGG
ACAACCTGGGTGCCGGTGCGGCGTCGGGGGCGCCGGGTGCGTTGCAGCTT
GTGATGTCGCAGCAAGATAACGAGAATCTCGTTGCGAAAGTATCGGCTTT
GGAGCAATCCCTGCAGCAGTTGCTGAACAACCAAGGTGGGGGCGCCGGTT
CGCACGTGGTCGGCCCGCACGCTGCTGATGGGGCGGGAGCCGCGGCGGCG
GTCGGTGCGGGTCTTGGTGCAGCTGCTGCTCCGGGGTCGGACGCTGATCG
CCAGCGTCGCTTCGCAAAAGCGGAATTCGAGAGTACTGCTTCCGCTTGGC
GTGCGGGACGTTTGATGTGGGCGCTGCGTGGTAAGCGGGGAATTGACGTT
CCCAACAAAGAGACCCTGCAAACGATGATGGGGGGGACCGTTACCGGCAC
CGACAAGACTTTGCAGCAGCTTCGTACCATGTCCGGACTGAACGTCCTCG
ACTTCTTTCCCGTTGGAAATTCTGGTGAGCTGTCAGTCCCGGACCACTTC
GATTTGACCTGTGCTGCGATCGTTAACGTGTTGAAATCTGGTCTCGCTGC
CACCTCCGCGGACAACGCTGCAGCTCTGGCGCGCTTGCTGCCCATGGAGC
AGGCCATGCTTTCGGCGCGGGGTACGCTGCGCATGCAAGCCCTCCGTCAT
GTGGGTGACTTTCCGGGGAGGGGGTCGCGGGGGACCTTCGCCGACCTCCC
CAACGATGACTTTCGTGAATGGGCAAATGCGGTAATGTTGTGGATGTTAC
CGATTCAGAATTTGCCGGTGCCGCCGGAGTCTTTCGAGCGCTTTAACCCC
CCGCCGGTTCCTCGGTTCGACGGCATCAATGGCTTCTCCATGTCCGGGAG
CATTGCGCTACGGATGTTCGGGACTGTGGGTGGTGGAGGTTCTTCTGGAT
CGAGTGGGGGTAAGAGACGGCGGGGGGACTCCCGCTCCGCGGGTGGGGAC
TCCAAACGCCGGTCGAAAGTGTGTTTCGAATATCGCGACTCCCAAACATG
CAGGTGGGGCGACTCCTGCGTGTTCCGCCATGCGACTGGGGGCGGCAAGG
GTGGCGGCGGCGGTGGGGGTCGCGCTTCGGGTGGAGGGGGAGCCTCGGGC
GCCGCGACCGATGGCGGAAGCGGCTCCTCGGCGTTGGTCGTTCGCCGGGG
AGATGGCAGCAACTGAGGACACGGGCTCTGCCTTTCGG back to topCoding sequence (CDS) from alignment at Scaffold_233:271760..273197- >EsuBft359_9a-0001 ID=EsuBft359_9a-0001|Name=EsuBft359_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1416bp|location=Sequence derived from alignment at Scaffold_233:271760..273197- (Ectocarpus subulatus male Bft15b)
ATGGCATTGGCAGCCCAGCAGGAACAGCAGAACCCACCGCCGCAGCAACA
GCAGCCGCCGCCGCAGCAGCCGCAGCAGCAGCAGCAGCAGCAGCAGACGC
AGCAACTTCAACGTCAGCAGCAAGAAGCGGCAGCTGGGGCCGCAGCCGTG
GCGGGTTCGGCGGTCGGCGGGGATGAGGCACGGCTGGCCGACGGCATGGC
TGGTTTATCCGTGGAGGGCCTCGGTGGGTCGTCTGCGGTGGCCGGGGGGG
ACAACCTGGGTGCCGGTGCGGCGTCGGGGGCGCCGGGTGCGTTGCAGCTT
GTGATGTCGCAGCAAGATAACGAGAATCTCGTTGCGAAAGTATCGGCTTT
GGAGCAATCCCTGCAGCAGTTGCTGAACAACCAAGGTGGGGGCGCCGGTT
CGCACGTGGTCGGCCCGCACGCTGCTGATGGGGCGGGAGCCGCGGCGGCG
GTCGGTGCGGGTCTTGGTGCAGCTGCTGCTCCGGGGTCGGACGCTGATCG
CCAGCGTCGCTTCGCAAAAGCGGAATTCGAGAGTACTGCTTCCGCTTGGC
GTGCGGGACGTTTGATGTGGGCGCTGCGTGGTAAGCGGGGAATTGACGTT
CCCAACAAAGAGACCCTGCAAACGATGATGGGGGGGACCGTTACCGGCAC
CGACAAGACTTTGCAGCAGCTTCGTACCATGTCCGGACTGAACGTCCTCG
ACTTCTTTCCCGTTGGAAATTCTGGTGAGCTGTCAGTCCCGGACCACTTC
GATTTGACCTGTGCTGCGATCGTTAACGTGTTGAAATCTGGTCTCGCTGC
CACCTCCGCGGACAACGCTGCAGCTCTGGCGCGCTTGCTGCCCATGGAGC
AGGCCATGCTTTCGGCGCGGGGTACGCTGCGCATGCAAGCCCTCCGTCAT
GTGGGTGACTTTCCGGGGAGGGGGTCGCGGGGGACCTTCGCCGACCTCCC
CAACGATGACTTTCGTGAATGGGCAAATGCGGTAATGTTGTGGATGTTAC
CGATTCAGAATTTGCCGGTGCCGCCGGAGTCTTTCGAGCGCTTTAACCCC
CCGCCGGTTCCTCGGTTCGACGGCATCAATGGCTTCTCCATGTCCGGGAG
CATTGCGCTACGGATGTTCGGGACTGTGGGTGGTGGAGGTTCTTCTGGAT
CGAGTGGGGGTAAGAGACGGCGGGGGGACTCCCGCTCCGCGGGTGGGGAC
TCCAAACGCCGGTCGAAAGTGTGTTTCGAATATCGCGACTCCCAAACATG
CAGGTGGGGCGACTCCTGCGTGTTCCGCCATGCGACTGGGGGCGGCAAGG
GTGGCGGCGGCGGTGGGGGTCGCGCTTCGGGTGGAGGGGGAGCCTCGGGC
GCCGCGACCGATGGCGGAAGCGGCTCCTCGGCGTTGGTCGTTCGCCGGGG
AGATGGCAGCAACTGA back to top
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