Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft359_2 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 8 |
| Length | 212 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft359_2a-0001 ID=EsuBft359_2a-0001|Name=EsuBft359_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2126bp|location=Sequence derived from alignment at Scaffold_233:335652..341954- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGGGCGGTTGGACTTGTCAGAGACGGCGAAGACTCTACAGACGAAGG
GGAGTCTCAATCGCCGGGGCGAGTGGGGGAGAGGGGGCGCCGTGGCGGCG
GTGGTGGGTGGAGGCTACCCACGCGAGTTGTGGAGGAGATGCGCAGGGAG
TTCGACCGGAAGATGGACCAAGAGAGCGCCGAGGAGAATAAGGCGTTGCT
GGAAGCACGGGCCAGGCTTGCGGAGCGGGAAGGTGCCAGGACAAAGCGGG
AGTTGCAAGACCTGAGTGAACGACTCACCAACGACGGGCGCGACGCTCTG
GCTTCCTTTCGGCGAGATCTAGAAGCGGAGGAAGAGAAACGTCTGGCGGA
AGAGAGAGGAAACCTCAAGGAGGCATTGGCACGTGCGCTGCAGCAGGAAC
GGGAGCGGTTGGTGACCGAGAGAAAGCTGAAGGTGTTCGACGCTCGGGAC
GCCAGTGGGCGAGAATCGTCGCAGGTGGCGGCGAACCTGTGGGAACAGGC
GGAACGTTCCACATCCGCCAGGAGGGAAGAGGTGGTCCGCCTCCTGGATG
AGGCCGCTGACAGGGCTAGGGTCAAACTTGATGAGCTACTGGCGGAGCAA
GAAGAGCAAGGGTTGCGAGCGATCAGGGACAGGAGTTCAGCGGAGAGGAA
GGCGGCGTTGAAACGAATTAGAGAAGAGGGGGAACGTCGCTGCCTGAAGG
AGCTCAAGGCTCTTGCCGACAGCGCAAGCCAGAAGAACGAGGCCTGGCTG
CGAATGGTCTTCGGCGGCCTGGGAAAGCAGTTCGAGCGTGGTGATGAGAG
TACCAGGGCAGGAGCAACAGCAGCGGCAGCAGAAAACGGAATGAGAGGAT
TAGGAGGAGGAGGAGGAGGAGGAGGAGGGCTCGACGAGGATGGGGGTTCC
GTATCTCCGGCGCTCCGCCTCAGTTGAAGCTTCCAACGACTGCGAGAGGC
TAGGCAGGCGACTCGTCGAATTGGTCATCCAAGAAGCGTCAATGAGGCTA
AGAGAGAGCGACTTCGATGTCACCACGCAAGAGCACAATGCACGAGAATC
TGGTACCACGGCCTCCGCCACCGCTAGCATCGGCAACAGCAGCATGAGCA
AGAGCGACGTAGACAAGACCATCACCGAGTCCCAGGATCTAGCGCATCGC
GGCCGAAACCAACATCGCGCTGGCAACAGCAGTTGTAGCGGCGACGCCCC
CCGCGAAAAGCGTTGTCAAGGTTGCGAGAGACTGGCTCACGCTAACGTTG
AGCTTACACGGCTTTTGTTGCAAACATCCACCATGAGAGCACGGGAGGAG
GTACGTTGTGCTGATACCCCCATCACGACAAACACCCCGTCACCACCACC
AACAACAGCAGCTGATGCCCGGGGGCAGGGAGCGGCGAGAACAGCGAGGG
CAGCAACGACTAGAAACAAGCACCGAGCTGCTTTAGCTGCCGGGGGGGTG
GTCAACAGAAAGAAGCGAGCGCCTTCTTCGGCAAGAAGTACCAAAGTAGT
GTCAGTCGTGTCACCGACACATCGTCCAAAATTCTCCGGTCGACTCACCA
ACACGACCTTGTAGCCAGCCCTGTACCCTTATCGTGCACCTCAGCGCTAC
AGCCTTTACCCCGCGAGATATGTCGAAAAGGAAACCTAGGAGGTCAGGAC
CCACGGGTGCAATTTCGGCACAACATATGCAAGGATCTGTCGTGTTGCCC
ACAACGTTGACACGGGGCCGTATGTAGTCCGGCCAAAGTGAAACCCGGGG
GGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGTCCCGCAACTGTTTTCATCCAAAAGAATGGGAACGGCACAACGGCACC
GAGCTGTGCGTTTCAGGAATTTATTGTACAAGTAGTTAGCAGAGAACAAG
ACATGGAGTCACATGGCAATATTACGGGTCAGCACAGCTTCTTGATGGAG
AGTTGCACGATGACGGGTGGTTCGGCCAGAAAACGTCAGACAAAGTAGCT
CGCTGGCACAGCGAAAGGTTAGTACTCGGAAAACCAAACCTAGAGCAACG
AGAGAGAGCACGAACTATTTCCCGTTTGCGGAGATGTACACATGACGTGT
GATTACGGAGGCAAGATAGGAGAGGT back to topprotein sequence of EsuBft359_2a-0001 >EsuBft359_2 ID=EsuBft359_2|Name=EsuBft359_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=308bp
MRAVGLVRDGEDSTDEGESQSPGRVGERGRRGGGGGWRLPTRVVEEMRRE
FDRKMDQESAEENKALLEARARLAEREGARTKRELQDLSERLTNDGRDAL
ASFRRDLEAEEEKRLAEERGNLKEALARALQQERERLVTERKLKVFDARD
ASGRESSQVAANLWEQAERSTSARREEVVRLLDEAADRARVKLDELLAEQ
EEQGLRAIRDRSSAERKAALKRIREEGERRCLKELKALADSASQKNEAWL
RMVFGGLGKQFERGDESTRAGATAAAAENGMRGLGGGGGGGGGLDEDGGS
VSPALRLS back to topmRNA from alignment at Scaffold_233:335652..341954- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft359_2a-0001 ID=EsuBft359_2a-0001|Name=EsuBft359_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6303bp|location=Sequence derived from alignment at Scaffold_233:335652..341954- (Ectocarpus subulatus male Bft15b)
ATGAGGGCGGTTGGACTTGTCAGAGACGGCGAAGACTCTACAGACGAAGG
GGAGTCTCAATCGCCGGGGCGAGTGGGGGAGAGGGGGCGCCGTGGCGGCG
GTGGTGGGTGGAGGCTACCCACGCGAGTTGTGGAGGAGATGCGCAGGGAG
TTCGACCGGAAGATGGACCAAGAGAGCGCCGAGGTCAGTACCGCAGCTCG
GATGGGAAGGAGGGTAGAGGAGTGGGAAGGACTGGTGGAAGGTTGTCTTT
GTAGCATTGCCTTGTGGAGGTGTAGAGGTTGAGCCACCGCATGACCTTAT
GAACGCACCCTCCCCCGTGTACCGTCGCGTCCTGACTCGTTGGCCCTCTG
CCGGATGCTTTTTATTTTTTCTAGGTTTTGGAGCAGGAGAATAAGGCGTT
GCTGGAAGCACGGGCCAGGCTTGCGGAGCGGGAAGGTGCCAGGACAAAGC
GGTAAGCTTGGCGGCGACTTCGTGGTACTCTGGTTGTCCGAAGTTGTTGA
CCGAATCCATTCCCCTTCGGTACCGTTTTGATCCAGATGCACCAGTTTTA
CAAATCCGATGCGAGCACCCCAAACATTAGCATTTCCGTGCCTGCTAACA
TCTCGATACCAGCACCTCGCATGGGAGAACCAGGAGAACTGACACCCGAT
AGTCACTGTCTGTCCACTTGGGGCAATGATTTGTAGTTCAACAAAGAAAC
AAACAAGCGCGATCGTCCCAATCGGTGTAGTAGTTTGGTAGGTGCATGGG
GAGTTAGTTGTGATGAGAAGCGAACGGTCATTCGTTATTCCCGTCCGCCG
AAGGACCGAACAAAATATAGGTAGAGATCAGGAGCCTTATGACTAGGTTG
GCGGAACTGAGGGACGATCCCTCGAAACCTCCCTCGCTGGAACTGGCTGT
CCTCGACTTGTTCATCCCGGTAGGAATGTGTTAGAACAGTCGTCAGGGGT
TAGCTGGCGTTGGCGATGTAGTTGTTGTTCGTAGTGACAGTGGCGGTGTG
GTGGCGGTGTTGTTGCTGTTGTTGCTGTTGCTACTGGTGCTGTACCCCAG
TCACGGGGAACACATGCGCTGGCAATTCTCACCAACAGCCATCACCGTAC
AGGGAGTTGCAAGACCTGAGTGAACGACTCACCAACGACGGGCGCGACGC
TCTGGCTTCCTTTCGGCGAGATCTAGAAGCGGAGGAAGAGAAACGTCTGG
CGGAAGAGAGAGGAAACCTCAAGGAGGCATTGGCACGTGAGTCGTTGCGT
TGTTAGCAACATATATTAATCGTTTCACTCTGGTAGAATCCCACTATCTC
TTGCCTGGAGAACGACCGTTCAAGCAACATGGTGGGGTTATTGTTTTCCG
TCATGGTGGTGACAGGTGCGCTGCAGCAGGAACGGGAGCGGTTGGTGACC
GAGAGAAAGCTGAAGGTGTTCGACGCTCGGGACGCCAGTGGGTGTGTAAA
ACTGCTCGTGTTGGGAGCACACTTCCCACCTGACGAAGATCAGCTTTGAC
TCGGAAAAAAATCCGTCGTAGGAGATAAATCGCGCTTCACCAAAAAACAA
GGCGACCCGAAAGAAAGGCTTTGACCAACCCTAGAAGTTTGAGATCCCAA
AAGATAGTAAAATCAAAACAGTGCTGAGTACAGCCAGTCGAAAAATAAGA
CAAACGCAGACACCCCAGGTCATGGACATTTTTTTCGAGGGTCAAGTGCC
CGTTGGTCGAGACGAAGGCGTTCCTCCCAACACACACCGGTGTGATTATT
TCGGGTACAATATATTTTGACTTGAGAAAAGGAACGGTGCAATACACCAA
GAAGAGAGGCAAGCGCGCTCAGGGCCGACCGTAGAGCGCGGCACACGCCG
AGGAACCAAATCATGTTGTTCACCTTTGTCTTTTCGTTCTGTCCAGCATG
TACTCGGCGTATTTGGTAGACAGTTCTAGACGACTTATCGTCGAGCACCC
CAAGCGAACCACCATCAAACACCCTCTATGAATCCCCGAACTCTAACCGT
GGTGAGCATCGCAACATTCCGCAATATTTTTTTTGTTTATCGAGGCGAGA
ATCGTCGCAGGTGGCGGCGAACCTGTGGGAACAGGCGGAACGTTCCACAT
CCGCCAGGAGGGAAGAGGTGGTCCGCCTCCTGGATGAGGCCGCTGACAGG
GCTAGGGTCAAACTTGATGAGCTACTGGCGGTGAGTCTCGTTTTCTGTAC
GACCAAGAGAGCTGTTCCACATGTTATTCGGCAATACGGAATGGATGGGA
GAGGAAGAAACCTTGAGAACGAAGGAGAAGAACAGAGATAGAGAGTGGGA
GGCAGAGAGAGGGAGATAGAGAGATAGATAGATAGATAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAAGGAGA
GAAGGAGAGAAAGAGAGAAAGAGCTCGAGAGGTACGATATTTGTATAGAG
AGAGGAAACAAACGTTTCTCGTGACGGAGAGAAATGCACCTGACCGTCCG
AAATCGCGCAAGGCAAAATGGAAAAAATAGCAGGGATATCAGGCTTGGGC
GACCATCAACACTCACTGAACGGTGAAGTTTGGCAAGAGTCCAAATACTA
AGAGATAGGGTGCAACATCGAATCTATCCTTCGCGGAAACATACCCCCGA
CATGAAGGTCAGGATGTGAGAACAACATGATTTCATCTTGAAGGGTCCGA
AAACGCGCGTGGACAAATGGAGATGAATGAGAGTGTAAAACACCCGGGAG
TGGGGGTGGAACTTTCAATCATGACTCCTTGCTCGTGGTGATTTGAAACA
GTTCCCCCAACGCGTAGGTTGTTGTCCCTGCTACACCGCTGGTGTTTGTC
CCCAGGAGCAAGAAGAGCAAGGGTTGCGAGCGATCAGGGACAGGAGTTCA
GCGGAGAGGAAGGCGGCGTTGAAACGAATTAGAGAAGAGGGGGAACGTCG
CTGCCTGAAGGAGCTCAAGGCTCTTGCCGACAGCGCAAGGTGCGGTACTG
CTCTTCCTTTTTTTTCTCCCGTCTTCTTTCCGCCTTTCTTTTCATCTTTC
TGTCCTTTCTGCTTCTTTCTTGTTGACGGTGCACTTTGCTGTACGGCTCG
TTTGTTGAGTTTCTAGATAAGCTCAAAGGGAGTTTCCATTGGTCCGAGTT
ATCGCCTGTATCTTCTCATGTTCTCAAGGGTGTTCAAAGCCCTCCGACGG
CGAAAGGCAGCGTTTACAGCTCTCCATCCAATGTGCAACACCCGTTGTTG
TCGCATGACAAGCAGCTCTTACTCCTGCCGCGACCATGACCGCCTTCGCC
CCCCCCCCCTCTCTGAACGCACTCACTCTGGTCCGGGGTTGATCTGACAA
GAGGACCGTCCCCCCCGCCTAAAACAGCCCTTCATTGCGGAGTGGGTCGC
CTGCCCAGGGTTGTTCTCGAAGAAAAGCGGGGTCCCATCCCAAACACCCA
CCCACCCGTTCGCCGGGTAGCGCGATCGGTGATGGGCTAGGAAACGAGGA
CATTCTGAGTTTTTCTCTTTGTATTCTTCCCGCTCAGGCTGTTCTTTTTT
TTCACAACAGCGGTAAGTCGGTTATGTAGCGCGGTCGATCCCATGCCTTA
AGGCAGACTTCGTCGAAATACCTTCTATCCTGAGGGACACTCCGATCGCC
GGTTGGTAAGACGGAATAAAGGGGCCCTTTTCACCTTCCGGCGAGTCAGG
TGGGCAGCCTCTCCCCGCCCGCAGTGCGATTGCTCGACGAGGCAGTGGGC
GGGGAACCGTCTGTGACGCCGTGGTTCTTCCATGCGTTTGCAGTGCGTTC
ATGATATGTTTGGCATTCTGGATGGAGGCCAGACAGTTTCGTTGATGCAA
AGTTTTCCAGAACAAGACGGTGACGAAAGAACACCATCAAGAACAACAGC
AACAACAACAACATTATCAGCAACAACAATTCCTGGGCCCTTCCTTCATC
GTATGTATGTGGCAGCCAGAAGAACGAGGCCTGGCTGCGAATGGTCTTCG
GCGGCCTGGGAAAGCAGTTCGAGCGTGGTGATGAGAGTACCAGGGCAGGA
GCAACAGCAGCGGCAGCAGAAAACGGAATGAGAGGATTAGGAGGAGGAGG
AGGAGGAGGAGGAGGGCTCGACGAGGATGGGGGTTCCGTATCTCCGGCGC
TCCGCCTCAGGTGAGAAAAAAGTCACAAGACATGTGGAAATGGTAACAAC
AACAACAACAACGACAACAACAACAACAACAACAACCATAACAATGCTTT
CATTTTTGCGCTCTCATTTTGCTCACACGCCAACCCCCACCAGGGCAGTT
GAAGCTTCCAACGACTGCGAGAGGCTAGGCAGGCGACTCGTCGAATTGGT
CATCCAAGAAGCGTCAATGAGGCTAAGAGAGAGGTGAACCTGATTGTTTG
GTACACTTAACCGAGATGGATTGAATCTTGTCGTAGGTAACCACGCTCAA
AGATAGTCAGACCTTCTGGTTCTAAATGGGAGGGGAAATAGATAGCATCG
TTGATTTTGCGCGCGTTTTTTTCCTTCGATGTAAAGGAGGAAGCAGAGGG
AGACGAAAAGTAAGTCGCGATGTCGGTGTCAAAAGCGTTTCGAGGCTGTG
TGTGTGAGCAAGGGTATACCGTCGTTCGTGCTAGGCGAGGGACGCCTCGT
GGTCACATAGGCTACAACACCATTGTCGGTCTGTGAGTGACAAGGACAAG
CGGCGTTTGTGTTCCTTTCGGTTAGTCAATGTTTTCTCACGTCGCCTTCT
TCCGCAAGGGGCTCGCGCTTGGCCGTTGAGGGAGGTTAGGGTGAATGAGA
GGCCAACGTTCCTAACGACACCTTCTGCGATCGTCTCAGTAATGATCGGT
CTTCGCCATCATAAACGTCCACATCGTGCCTGCGCGCTGACCTCCACCTC
CATTCAAACCGGAATATCGGGTTTTCATCGATCAGATAGGCATTTTGACC
GTGTGGGAAGCGATGTGATATGCTAGGGGACCCGCCAGGAAGGGTGAACC
GCATACAATGTACGACGAGAGATTCATGACGCAGACTTCGACACGTTGTG
ATGGGAAGAAGGAGGGCATTGCAAGGCTCCTCGGGTTGTGTCACGACGGA
ATTGTTATCGTTGACGGGAGTATCGTCGCGTCTTACAGCACTTATTTTTC
CTGTCGTGTCCGTGGCGCCCCGCGCCCCCGCGCAGCGACTTCGATGTCAC
CACGCAAGAGCACAATGCACGAGAATCTGGTACCACGGCCTCCGCCACCG
CTAGCATCGGCAACAGCAGCATGAGCAAGAGCGACGTAGACAAGACCATC
ACCGAGTCCCAGGATCTAGCGCATCGCGGCCGAAACCAACATCGCGCTGG
CAACAGCAGTTGTAGCGGCGACGCCCCCCGCGAAAAGCGTTGTCAAGGTT
GCGAGAGACTGGCTCACGCTAACGTTGAGCTTACACGGCTTTTGTTGCAA
ACATCCACCATGAGAGCACGGGAGGAGGTACGTTGTGCTGATACCCCCAT
CACGACAAACACCCCGTCACCACCACCAACAACAGCAGCTGATGCCCGGG
GGCAGGGAGCGGCGAGAACAGCGAGGGCAGCAACGACTAGAAACAAGCAC
CGAGCTGCTTTAGCTGCCGGGGGGGTGGTCAACAGAAAGAAGCGAGCGCC
TTCTTCGGCAAGAAGTACCAAAGTAGTGTCAGTCGTGTCACCGACACATC
GTCCAAAATTCTCCGGTCGACTCACCAACACGACCTTGTAGCCAGCCCTG
TACCCTTATCGTGCACCTCAGCGCTACAGCCTTTACCCCGCGAGATATGT
CGAAAAGGAAACCTAGGAGGTCAGGACCCACGGGTGCAATTTCGGCACAA
CATATGCAAGGATCTGTCGTGTTGCCCACAACGTTGACACGGGGCCGTAT
GTAGTCCGGCCAAAGTGAAACCCGGGGGGGGGGGGGNGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCCCGCAACTGTTTTCATCCA
AAAGAATGGGAACGGCACAACGGCACCGAGCTGTGCGTTTCAGGAATTTA
TTGTACAAGTAGTTAGCAGAGAACAAGACATGGAGTCACATGGCAATATT
ACGGGTCAGCACAGCTTCTTGATGGAGAGTTGCACGATGACGGGTGGTTC
GGCCAGAAAACGTCAGACAAAGTAGCTCGCTGGCACAGCGAAAGGTTAGT
ACTCGGAAAACCAAACCTAGAGCAACGAGAGAGAGCACGAACTATTTCCC
GTTTGCGGAGATGTACACATGACGTGTGATTACGGAGGCAAGATAGGAGA
GGT back to topCoding sequence (CDS) from alignment at Scaffold_233:335652..341954- >EsuBft359_2a-0001 ID=EsuBft359_2a-0001|Name=EsuBft359_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=927bp|location=Sequence derived from alignment at Scaffold_233:335652..341954- (Ectocarpus subulatus male Bft15b)
ATGAGGGCGGTTGGACTTGTCAGAGACGGCGAAGACTCTACAGACGAAGG
GGAGTCTCAATCGCCGGGGCGAGTGGGGGAGAGGGGGCGCCGTGGCGGCG
GTGGTGGGTGGAGGCTACCCACGCGAGTTGTGGAGGAGATGCGCAGGGAG
TTCGACCGGAAGATGGACCAAGAGAGCGCCGAGGAGAATAAGGCGTTGCT
GGAAGCACGGGCCAGGCTTGCGGAGCGGGAAGGTGCCAGGACAAAGCGGG
AGTTGCAAGACCTGAGTGAACGACTCACCAACGACGGGCGCGACGCTCTG
GCTTCCTTTCGGCGAGATCTAGAAGCGGAGGAAGAGAAACGTCTGGCGGA
AGAGAGAGGAAACCTCAAGGAGGCATTGGCACGTGCGCTGCAGCAGGAAC
GGGAGCGGTTGGTGACCGAGAGAAAGCTGAAGGTGTTCGACGCTCGGGAC
GCCAGTGGGCGAGAATCGTCGCAGGTGGCGGCGAACCTGTGGGAACAGGC
GGAACGTTCCACATCCGCCAGGAGGGAAGAGGTGGTCCGCCTCCTGGATG
AGGCCGCTGACAGGGCTAGGGTCAAACTTGATGAGCTACTGGCGGAGCAA
GAAGAGCAAGGGTTGCGAGCGATCAGGGACAGGAGTTCAGCGGAGAGGAA
GGCGGCGTTGAAACGAATTAGAGAAGAGGGGGAACGTCGCTGCCTGAAGG
AGCTCAAGGCTCTTGCCGACAGCGCAAGCCAGAAGAACGAGGCCTGGCTG
CGAATGGTCTTCGGCGGCCTGGGAAAGCAGTTCGAGCGTGGTGATGAGAG
TACCAGGGCAGGAGCAACAGCAGCGGCAGCAGAAAACGGAATGAGAGGAT
TAGGAGGAGGAGGAGGAGGAGGAGGAGGGCTCGACGAGGATGGGGGTTCC
GTATCTCCGGCGCTCCGCCTCAGTTGA back to top
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