Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FZS5 |
| ProteomeId | EsuBft359_20 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 190 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.02e-65 |
| EggNOG OGs | 2D16T@1|root,2SGXK@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft359_20a-0001 ID=EsuBft359_20a-0001|Name=EsuBft359_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1908bp|location=Sequence derived from alignment at Scaffold_233:137008..139531- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAACCACAGTCAAGCCGCAGCCGAAGTCGCCAAGGTCGAATCGAAGGC
AGTGCGGCGGTGGGTGAAGGAGTTTTGCAAGGGCGGCGCCTTCTTTGTCC
CCAAACGGCAGTACAACAAGCGGGAGCCGCACTCCTTCATCGAAGACGAG
GACAAGCGCAACCACCTGAGGGAGTACATCGATCGCAAGCTGTATCGGCG
GAAGAAGGACGAGCCGCGCCTCCGAATCGCAGACGTGCACAAAATCCAAG
AAGGTGGGGCGAAAATGAACCACAGTCAAGCCGCAGCCGAAGTCGCCAAG
GTCGAATCGAAGGCAGTGCGGCGGTGGGTGAAGGAGTTTTGCAAGGGCGG
CGCCTTCTTTGTCCCCAAACGGCAGTACAACAAGCGGGAGCCGCACTCCT
TCATCGAAGACGAGGACAAGCGCAACCACCTGAGGGAGTACATCGATCGC
AAGCTGTATCGGCGGAAGAAGGACGAGCCGCGCCTCCGAATCGCAGACGT
GCACAAGGATTGCGTGCGTGTTCGACGGCTCCAGCAGTGTCCGTGCGAGA
CGCGAAGGGACAAGGGAAGATGTTCGCACTTCGTGGCGTGTGAGTGCGAT
GACTGCAAGCGCAAGCCTGCCGTCGACTCCGCGCAGGTGGCGTTCGACAA
GCGCGACCTCACCTCCACGGACGGCAAGGGGGACTACCGCCTGCTGCCTG
ATCACCAGGTGCTGTCGCTTTACTTCCACGACGAAACCACTGCGAAGGAG
AACGACGATGGGGACCACCAATGGGTGTCGACGAAGAAAGGGGCCCCCAT
GAAAGTCAAGGGGGAGGGCCGCGCCGCACACATCTCGGACGTGATCGGCG
TCGACCTTGGCCAGCTGCAGATCAGCAAGGAGGCGTGGGGCATGATGCAG
GAGGACAAGGATGCCGAAACGGGGCGCTCCGGAAAGTACTTCGGCAGGAA
GGAGGGCGAGGGGGTACACGGTCACGAGGTGAAGGAGGTTCAAGACGCGG
TGGAAGTGCTGAAGACGGCTGCTGCAGATTGCGCGGTGTTGGAGACAGCC
AACGACCCTTGGACGGCAGCTGTCATCATGACCGTCGGGCAGCAACACGA
CCGCTACTGGACGAGCGATCGCATGTGCGCCCGACTGCCGGCGATCATCG
CCATGGTCGAGCTGACGAGTGGCCCGCACCGGCAGGATGTCCTCATCTTC
GACAACTCCACCGGGCACAACGCGTACGGCGAAGACGCGTTGTTGGCCCA
CAAGATCAACATGGCGCCGGGTGGCGAGAAGGGAGCGTTGAGGGTGTTCG
AAGATGACAACGGGAACACGGTGGAGAAGAAGCAGAAGGAGCGCAAGAAC
GGAACGGCACTCGACAAGAAGAAGTTTTCCGTCGGCACCAAGGTCGTGGC
TGGATCGCCGCTGCTTGGCGTCAACAAAGGAGCTGAGCAAATGCTCCGGG
AGATGGGGTTGTGGCGGCTTGGTGGCGAGAGGAAGGAGGGGCTGCTCCAG
ATTTGCAAGAAGTGCAAGGCGAACAACGCTGCGTCACGGCAAGAGATCAC
CGCTTTCAACAAAAGGGGGGGAGGAGAGGGAGAGGGTTCTAGAGCAAGCG
CGGCGGGAGCAGCAGAATTCTTCCACCGAGGGGCCCACTACAGCGGGAGG
GGCGGCTGGAACGCAACGCGGCAGCGGTGTTGTGCGTATCGGGTCTTCTC
CGACCTGAGGGCTTTGAAGGAGCAGCTTAACAAGGTCGAGGAGATCTTCA
AGAAGGCCGGCCACGCGGTGGCGTGGCTCTACGTTGAGGCTTACGACGAC
GGCCTGGAGGACTACCTCAAGGACCACGACCTCAAGGACTGGCACACCCA
CCGAGAAGCCTCTAAGCGGGGGGACGCCATCGTGGAGGCAGGGGGGGGGG
GGGGGNNN back to topprotein sequence of EsuBft359_20a-0001 >EsuBft359_20 ID=EsuBft359_20|Name=EsuBft359_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=636bp
MNHSQAAAEVAKVESKAVRRWVKEFCKGGAFFVPKRQYNKREPHSFIEDE
DKRNHLREYIDRKLYRRKKDEPRLRIADVHKIQEGGAKMNHSQAAAEVAK
VESKAVRRWVKEFCKGGAFFVPKRQYNKREPHSFIEDEDKRNHLREYIDR
KLYRRKKDEPRLRIADVHKDCVRVRRLQQCPCETRRDKGRCSHFVACECD
DCKRKPAVDSAQVAFDKRDLTSTDGKGDYRLLPDHQVLSLYFHDETTAKE
NDDGDHQWVSTKKGAPMKVKGEGRAAHISDVIGVDLGQLQISKEAWGMMQ
EDKDAETGRSGKYFGRKEGEGVHGHEVKEVQDAVEVLKTAAADCAVLETA
NDPWTAAVIMTVGQQHDRYWTSDRMCARLPAIIAMVELTSGPHRQDVLIF
DNSTGHNAYGEDALLAHKINMAPGGEKGALRVFEDDNGNTVEKKQKERKN
GTALDKKKFSVGTKVVAGSPLLGVNKGAEQMLREMGLWRLGGERKEGLLQ
ICKKCKANNAASRQEITAFNKRGGGEGEGSRASAAGAAEFFHRGAHYSGR
GGWNATRQRCCAYRVFSDLRALKEQLNKVEEIFKKAGHAVAWLYVEAYDD
GLEDYLKDHDLKDWHTHREASKRGDAIVEAGGGGGX back to topmRNA from alignment at Scaffold_233:137008..139531- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft359_20a-0001 ID=EsuBft359_20a-0001|Name=EsuBft359_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2524bp|location=Sequence derived from alignment at Scaffold_233:137008..139531- (Ectocarpus subulatus male Bft15b)
ATGAACCACAGTCAAGCCGCAGCCGAAGTCGCCAAGGTCGAATCGAAGGC
AGTGCGGCGGTGGGTGAAGGAGTTTTGCAAGGGCGGCGCCTTCTTTGTCC
CCAAACGGCAGTACAACAAGCGGGAGCCGCACTCCTTCATCGAAGACGAG
GACAAGCGCAACCACCTGAGGGAGTACATCGATCGCAAGCTGTATCGGCG
GAAGAAGGACGAGCCGCGCCTCCGAATCGCAGACGTGCACAAGTGAGTGT
GGTTGGAAGTGTNCGAAACGAATGACGCCCGTACCGCCCGTACGACAGAA
TCCAAGAAGGTGGGGCGAAAATGAACCACAGTCAAGCCGCAGCCGAAGTC
GCCAAGGTCGAATCGAAGGCAGTGCGGCGGTGGGTGAAGGAGTTTTGCAA
GGGCGGCGCCTTCTTTGTCCCCAAACGGCAGTACAACAAGCGGGAGCCGC
ACTCCTTCATCGAAGACGAGGACAAGCGCAACCACCTGAGGGAGTACATC
GATCGCAAGCTGTATCGGCGGAAGAAGGACGAGCCGCGCCTCCGAATCGC
AGACGTGCACAAGTGAGTGTGGTTGGAAGTGTGGGAAGCGGAAGGAGCAT
ATCAGTCGTTGGTAGAGGTAGGCACGCACGCGAAAATTTGTTTCGTTGCG
AGGCGTATACGGTTTGAGGCAGACGCTCCTACTGCGGTACTGCGGTGCGT
TTTTCTACCTAGAGTACCAGTAACGCTAGCCCCCTCCGGCTTTGATCCCC
CACNGAGGCGTACTACCGACCGAAGAAGGTGAAACGCGAGGAGCTTTTCT
GGCCAGCAGTGCGGACGATCGACGGCAAGGAGGAGTACAAGCACGTGCGC
GTCCACAACCCCGCGCACGCTCGCGGCAGGGATTGCGTGCGTGTTCGACG
GCTCCAGCAGTGTCCGTGCGAGACGCGAAGGGACAAGGGAAGATGTTCGC
ACTTCGTGGCGTGTGAGTGCGATGACTGCAAGCGCAAGCCTGCCGTCGAC
TCCGCGCAGGTGGCGTTCGACAAGCGCGACCTCACCTCCACGGACGGCAA
GGGGGACTACCGCCTGCTGCCTGATCACCAGGTGCTGTCGCTTTACTTCC
ACGACGAAACCACTGCGAAGGAGAACGACGATGGGGACCACCAATGGGTG
TCGACGAAGAAAGGGGCCCCCATGAAAGTCAAGGGGGAGGGCCGCGCCGC
ACACATCTCGGACGTGATCGGCGTCGACCTTGGCCAGCTGCAGATCAGCA
AGGAGGCGTGGGGCATGATGCAGGAGGACAAGGATGCCGAAACGGGGCGC
TCCGGAAAGTACTTCGGCAGGAAGGAGGGCGAGGGGGTACACGGTCACGA
GGTGAAGGAGGTTCAAGACGCGGTGGAAGTGCTGAAGACGGCTGCTGCAG
ATTGCGCGGTGTTGGAGACAGCCAACGACCCTTGGACGGCAGCTGTCATC
ATGACCGTCGGGCAGCAACACGACCGCTACTGGACGAGCGATCGCATGTG
CGCCCGACTGCCGGCGATCATCGCCATGGTCGAGCTGACGAGTGGCCCGC
ACCGGCAGGATGTCCTCATCTTCGACAACTCCACCGGGCACAACGCGTAC
GGCGAAGACGCGTTGTTGGCCCACAAGATCAACATGGCGCCGGGTGGCGA
GAAGGGAGCGTTGAGGGTGTTCGAAGATGACAACGGGAACACGGTGTGCC
CTACATTCGAGCTTGGTGACACTCTGCTCACCGACAGGAGATCTTCTTGC
CTAAGACGCAGGTGGAGAAGAAGCAGAAGGAGCGCAAGAACGGAACGGCA
CTCGACAAGAAGAAGTTTTCCGTCGGCACCAAGGTCGTGGCTGGATCGCC
GCTGCTTGGCGTCAACAAAGGAGCTGAGCAAATGCTCCGGGAGATGGGGT
TGTGGCGGCTTGGTGGCGAGAGGAAGGAGGGGCTGCTCCAGATTTGCAAG
AAGTGCAAGGCGAACAACGCTGCGTCACGGCAAGAGATCACCGCTTTCAA
CAAAAGGGGGGGAGGAGAGGGAGAGGGTTCTAGAGCAAGCGCGGCGGGAG
CAGCAGAATTCTTCCACCGAGGGGCCCACTACAGCGGGAGGGGCGGCTGG
AACGCAACGCGGCAGCGGTGTTGTGCGTATCGGGTCTTCTCCGACCTGAG
GGCTTTGAAGGAGCAGCTTAACAAGGTCGAGGAGATCTTCAAGAAGGCCG
GCCACGCGTGTGAATCTTCCTTCCCAAGTACCACCCTGAGCTCAACGCCA
TTGAGCGGTACTGGGGATACATCAAGCACGTTCTTCGTCTTCACTGCGAG
TACTCTCTCCCCCACATGTGTTCAAGATTCTGCCGGGCACAATGAGTGGC
GTGCCTTTGGGCCACACCCGCGCGTGGAGTAGGGTGGCGTGGCTCTACGT
TGAGGCTTACGACGACGGCCTGGAGGACTACCTCAAGGACCACGACCTCA
AGGACTGGCACACCCACCGAGAAGCCTCTAAGCGGGGGGACGCCATCGTG
GAGGCAGGGGGGGGGGGGGGGNNN back to topCoding sequence (CDS) from alignment at Scaffold_233:137008..139531- >EsuBft359_20a-0001 ID=EsuBft359_20a-0001|Name=EsuBft359_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1908bp|location=Sequence derived from alignment at Scaffold_233:137008..139531- (Ectocarpus subulatus male Bft15b)
ATGAACCACAGTCAAGCCGCAGCCGAAGTCGCCAAGGTCGAATCGAAGGC
AGTGCGGCGGTGGGTGAAGGAGTTTTGCAAGGGCGGCGCCTTCTTTGTCC
CCAAACGGCAGTACAACAAGCGGGAGCCGCACTCCTTCATCGAAGACGAG
GACAAGCGCAACCACCTGAGGGAGTACATCGATCGCAAGCTGTATCGGCG
GAAGAAGGACGAGCCGCGCCTCCGAATCGCAGACGTGCACAAAATCCAAG
AAGGTGGGGCGAAAATGAACCACAGTCAAGCCGCAGCCGAAGTCGCCAAG
GTCGAATCGAAGGCAGTGCGGCGGTGGGTGAAGGAGTTTTGCAAGGGCGG
CGCCTTCTTTGTCCCCAAACGGCAGTACAACAAGCGGGAGCCGCACTCCT
TCATCGAAGACGAGGACAAGCGCAACCACCTGAGGGAGTACATCGATCGC
AAGCTGTATCGGCGGAAGAAGGACGAGCCGCGCCTCCGAATCGCAGACGT
GCACAAGGATTGCGTGCGTGTTCGACGGCTCCAGCAGTGTCCGTGCGAGA
CGCGAAGGGACAAGGGAAGATGTTCGCACTTCGTGGCGTGTGAGTGCGAT
GACTGCAAGCGCAAGCCTGCCGTCGACTCCGCGCAGGTGGCGTTCGACAA
GCGCGACCTCACCTCCACGGACGGCAAGGGGGACTACCGCCTGCTGCCTG
ATCACCAGGTGCTGTCGCTTTACTTCCACGACGAAACCACTGCGAAGGAG
AACGACGATGGGGACCACCAATGGGTGTCGACGAAGAAAGGGGCCCCCAT
GAAAGTCAAGGGGGAGGGCCGCGCCGCACACATCTCGGACGTGATCGGCG
TCGACCTTGGCCAGCTGCAGATCAGCAAGGAGGCGTGGGGCATGATGCAG
GAGGACAAGGATGCCGAAACGGGGCGCTCCGGAAAGTACTTCGGCAGGAA
GGAGGGCGAGGGGGTACACGGTCACGAGGTGAAGGAGGTTCAAGACGCGG
TGGAAGTGCTGAAGACGGCTGCTGCAGATTGCGCGGTGTTGGAGACAGCC
AACGACCCTTGGACGGCAGCTGTCATCATGACCGTCGGGCAGCAACACGA
CCGCTACTGGACGAGCGATCGCATGTGCGCCCGACTGCCGGCGATCATCG
CCATGGTCGAGCTGACGAGTGGCCCGCACCGGCAGGATGTCCTCATCTTC
GACAACTCCACCGGGCACAACGCGTACGGCGAAGACGCGTTGTTGGCCCA
CAAGATCAACATGGCGCCGGGTGGCGAGAAGGGAGCGTTGAGGGTGTTCG
AAGATGACAACGGGAACACGGTGGAGAAGAAGCAGAAGGAGCGCAAGAAC
GGAACGGCACTCGACAAGAAGAAGTTTTCCGTCGGCACCAAGGTCGTGGC
TGGATCGCCGCTGCTTGGCGTCAACAAAGGAGCTGAGCAAATGCTCCGGG
AGATGGGGTTGTGGCGGCTTGGTGGCGAGAGGAAGGAGGGGCTGCTCCAG
ATTTGCAAGAAGTGCAAGGCGAACAACGCTGCGTCACGGCAAGAGATCAC
CGCTTTCAACAAAAGGGGGGGAGGAGAGGGAGAGGGTTCTAGAGCAAGCG
CGGCGGGAGCAGCAGAATTCTTCCACCGAGGGGCCCACTACAGCGGGAGG
GGCGGCTGGAACGCAACGCGGCAGCGGTGTTGTGCGTATCGGGTCTTCTC
CGACCTGAGGGCTTTGAAGGAGCAGCTTAACAAGGTCGAGGAGATCTTCA
AGAAGGCCGGCCACGCGGTGGCGTGGCTCTACGTTGAGGCTTACGACGAC
GGCCTGGAGGACTACCTCAAGGACCACGACCTCAAGGACTGGCACACCCA
CCGAGAAGCCTCTAAGCGGGGGGACGCCATCGTGGAGGCAGGGGGGGGGG
GGGGGNNN back to top
|