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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft359_17 |
| Protein domains | Coil |
| Protein domains | IPR000477 |
| Protein domains | PTHR19446 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 146 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.98e-115 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft359_17a-0001 ID=EsuBft359_17a-0001|Name=EsuBft359_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1468bp|location=Sequence derived from alignment at Scaffold_233:183023..184600+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGTGTTCATCAACGATCTGTTGGAAGTCGTAGAGGCAGCAGTCCGGAAGG
GAGTAAAAGTAGGGGACACGGAAACGTCGGTTTCAGGAATGCTGTTTGCG
GATGATTTTGTCGGTATGTCGGACACCCCTGAGGGACTGCAACTGCAAAT
TGACGCGGCGAAGAAGTTTACTGATAAGTGGAGATTGTCTGCCAACGTTC
AGAAGAGTGCCGTCATGGTATGCAACGAGAACAAGGAGGAACCAGTAGAA
CATAGATGGAAGTGGGGGATCGAGGAGATTGCAGTAGTGGACCAGTACAC
ATACCTCGGAGTAGAGATCGCAAAAGACTGCTCGTGGAATGCACACATGT
CCAAGGTAGCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGCACCCAATA
GTCGCGAACCGGCACCTCGATACATGCATCAATTTGACGGTTTTCACGAG
CGTAATCGTACCGCCGCTAGAGTACGCCGGAGAAGTATGGGAAGGAAATA
AGAAGGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAAGCAGCGAAAACC
ATCCTAGGATGCTCCAGGCGCACAAGTAATGCAGCCGTGAGGGCAGAATT
GGGGATCCAATCCCTACGGTCGGGAAGAGACGCGAGGAAGCTGACCTGGC
AGTATCGCATGTGCGGGATGGGAGAGGAGAGGTTGCCGAGAATTGTATGG
GAGGCGAAGTGGGCAAACAAAAAGAGGGGTAGACAACCCACGGAATGGGT
CAAGGTTGTAGAGGACGTATGGAAGGGGCTCGACATCGGCGAAGATGAAA
CGCTGGAAACGGAGGGTCTACAGGGGTTCAAGGAGAAGATATCTGTTGCT
TGTGCCGAGAGAGAAGAACAGAATCTGAGGAAAGAATCCAAGGATAAGGA
GGGTCTAGAAGTGTACGGAATGTTGAAGGAAGGAATAGGGTTCAAGGACT
ATCTACATGGACCAATGGATGCAGGGACAAAGCTAAAGGCCAAATTCAGG
GCCGGGGACATAGGCCTTCGAGAACGTCGACGAAGACATAGGACGGTAGA
CGAGGAAGACGACGAGTTCAAATGTGATTGCGGCTTCAAATGCGAAGACC
GTGTCTCATTTAGTCGCGGAATGTCCGTGGTACAAGGAGAGGGAAGTTTA
CGGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAGACTAGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTA
GAAAGGAACGATTGGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCG
TCCTCTCGAGGACGCGTGGTCAATGGTCTAACCGCTAGGGCATGCAAAAC
ATAAGAGTACGAATCCCC back to topprotein sequence of EsuBft359_17a-0001 >EsuBft359_17 ID=EsuBft359_17|Name=EsuBft359_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=358bp
MLFADDFVGMSDTPEGLQLQIDAAKKFTDKWRLSANVQKSAVMVCNENKE
EPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGK
LHPIVANRHLDTCINLTVFTSVIVPPLEYAGEVWEGNKKVVKELEAAQMK
AAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLP
RIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIGEDETLETEGLQGFKEK
ISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLK
AKFRAGDIGLRERRRRHRTVDEEDDEFKCDCGFKCEDRVSFSRGMSVVQG
EGSLRVXX back to topmRNA from alignment at Scaffold_233:183023..184600+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft359_17a-0001 ID=EsuBft359_17a-0001|Name=EsuBft359_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1578bp|location=Sequence derived from alignment at Scaffold_233:183023..184600+ (Ectocarpus subulatus male Bft15b)
GGTGTTCATCAACGATCTGTTGGAAGTCGTAGAGGCAGTCCGGATAANTC
AAAATTCTTCGACATTGAGCAGGGGGTCCCACAAGGTTCCACGCTGTCTC
CAACATTGTTCCAAGTCTTCTTCAACGATCTGTTGGAAGTCGTAGAGGCA
GTCCGGAAGGGAGTAAAAGTAGGGGACACGGAAACGTCGGTTTCAGGAAT
GCTGTTTGCGGATGATTTTGTCGGTATGTCGGACACCCCTGAGGGACTGC
AACTGCAAATTGACGCGGCGAAGAAGTTTACTGATAAGTGGAGATTGTCT
GCCAACGTTCAGAAGAGTGCCGTCATGGTATGCAACGAGAACAAGGAGGA
ACCAGTAGAACATAGATGGAAGTGGGGGATCGAGGAGATTGCAGTAGTGG
ACCAGTACACATACCTCGGAGTAGAGATCGCAAAAGACTGCTCGTGGAAT
GCACACATGTCCAAGGTAGCGGAAAAGGGCAAAGCACGAGCAGGGAAGCT
GCACCCAATAGTCGCGAACCGGCACCTCGATACATGCATCAATTTGACGG
TTTTCACGAGCGTAATCGTACCGCCGCTAGAGTACGCCGGAGAAGTATGG
GAAGGAAATAAGAAGGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAAGC
AGCGAAAACCATCCTAGGATGCTCCAGGCGCACAAGTAATGCAGCCGTGA
GGGCAGAATTGGGGATCCAATCCCTACGGTCGGGAAGAGACGCGAGGAAG
CTGACCTGGCAGTATCGCATGTGCGGGATGGGAGAGGAGAGGTTGCCGAG
AATTGTATGGGAGGCGAAGTGGGCAAACAAAAAGAGGGGTAGACAACCCA
CGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTCGACATCGGC
GAAGATGAAACGCTGGAAACGGAGGGTCTACAGGGGTTCAAGGAGAAGAT
ATCTGTTGCTTGTGCCGAGAGAGAAGAACAGAATCTGAGGAAAGAATCCA
AGGATAAGGAGGGTCTAGAAGTGTACGGAATGTTGAAGGAAGGAATAGGG
TTCAAGGACTATCTACATGGACCAATGGATGCAGGGACAAAGCTAAAGGC
CAAATTCAGGGCCGGGGACATAGGCCTTCGAGAACGTCGACGAAGACATA
GGACGGTAGACGAGGAAGACGACGAGTTCAAATGTGATTGCGGCTTCAAA
TGCGAAGACCGTGTCTCATTTAGTCGCGGAATGTCCGTGGTACAAGGAGA
GGGAAGTTTACGGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAGACTAGGGAAGACATTTTTGAGCCACCTT
TGGCAAAGTAGAAAGGAACGATTGGCCATCGGTGATCGGTCCTGTGGGAA
CAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACCGCTAGGG
CATGCAAAACATAAGAGTACGAATCCCC back to topCoding sequence (CDS) from alignment at Scaffold_233:183023..184600+ >EsuBft359_17a-0001 ID=EsuBft359_17a-0001|Name=EsuBft359_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1074bp|location=Sequence derived from alignment at Scaffold_233:183023..184600+ (Ectocarpus subulatus male Bft15b)
ATGCTGTTTGCGGATGATTTTGTCGGTATGTCGGACACCCCTGAGGGACT
GCAACTGCAAATTGACGCGGCGAAGAAGTTTACTGATAAGTGGAGATTGT
CTGCCAACGTTCAGAAGAGTGCCGTCATGGTATGCAACGAGAACAAGGAG
GAACCAGTAGAACATAGATGGAAGTGGGGGATCGAGGAGATTGCAGTAGT
GGACCAGTACACATACCTCGGAGTAGAGATCGCAAAAGACTGCTCGTGGA
ATGCACACATGTCCAAGGTAGCGGAAAAGGGCAAAGCACGAGCAGGGAAG
CTGCACCCAATAGTCGCGAACCGGCACCTCGATACATGCATCAATTTGAC
GGTTTTCACGAGCGTAATCGTACCGCCGCTAGAGTACGCCGGAGAAGTAT
GGGAAGGAAATAAGAAGGTAGTGAAAGAACTCGAGGCGGCGCAGATGAAA
GCAGCGAAAACCATCCTAGGATGCTCCAGGCGCACAAGTAATGCAGCCGT
GAGGGCAGAATTGGGGATCCAATCCCTACGGTCGGGAAGAGACGCGAGGA
AGCTGACCTGGCAGTATCGCATGTGCGGGATGGGAGAGGAGAGGTTGCCG
AGAATTGTATGGGAGGCGAAGTGGGCAAACAAAAAGAGGGGTAGACAACC
CACGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTCGACATCG
GCGAAGATGAAACGCTGGAAACGGAGGGTCTACAGGGGTTCAAGGAGAAG
ATATCTGTTGCTTGTGCCGAGAGAGAAGAACAGAATCTGAGGAAAGAATC
CAAGGATAAGGAGGGTCTAGAAGTGTACGGAATGTTGAAGGAAGGAATAG
GGTTCAAGGACTATCTACATGGACCAATGGATGCAGGGACAAAGCTAAAG
GCCAAATTCAGGGCCGGGGACATAGGCCTTCGAGAACGTCGACGAAGACA
TAGGACGGTAGACGAGGAAGACGACGAGTTCAAATGTGATTGCGGCTTCA
AATGCGAAGACCGTGTCTCATTTAGTCGCGGAATGTCCGTGGTACAAGGA
GAGGGAAGTTTACGGGTGANNNNN back to top
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