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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LRN5 |
| ProteomeId | EsuBft2953_3 |
| Protein domains | IPR011935 |
| Protein domains | PTHR31005 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 10 |
| Max annot lvl | 2759|Eukaryota |
| Length | 203 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.55e-183 |
| EggNOG OGs | 28Q1A@1|root,2QWQ0@2759|Eukaryota |
| Ec32 ortholog description | Domain of unknown function DUF4140 |
| Ec32 ortholog | Ec-12_000460.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| GOs | GO:0003674,GO:0005488,GO:0005515 |
| Description | Domain of unknown function (DUF4139) |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2953_3a-0001 ID=EsuBft2953_3a-0001|Name=EsuBft2953_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2032bp|location=Sequence derived from alignment at Scaffold_211:15618..20112+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAACATGACCACGTACCCGCCGACGAACAGCCTGAAGGAAGCCATCAC CGAGCTCCACAAACCTCCGGCCACTTCATCTGCTTCCGCGTGTGTTCCGA AAGCAACGGAGAAAGTGACGAAGAAACCGGGTAGGATACTCATCACCGTG GACGTACAAGAGCTTGGCAACATCGAACTGGAGGGTCTCGCCCCCTGGGT GAGGCGGCCACTTTACCCTTCCTTCCATCTACGTGATCCATTGTGGAAGT ACATGACCCGTGGGGCGACTTGGTCTCCTTCGTGCACGTACTACGGAATG GTCACACAGAGCACCACTGAGGACTGGAAAGGAGTGTCTCTTCGGCTGTC GACAGCGGAGCCCACTGTCCACGGGACGCCACCTGCGCTGGAAGGCAAGA CTGTTTCTCTCAAACCCTATCGGATGCCGGAGCCCAGTTTCAGCAAACCT CGTGGCGCCATGGGAAGGAAGAAGAGCGGAGCGTACAGTCGGCGATCGAG CTTCGGGAGTGTCGGTGAATGCGAGGAGGACGGGGAGTCTTCAAGCCTAG ATGACACCATGTCAGCGGCGCTGTGCGTGGAGGGCTACGGCGGCGGCGCT CCTGGCCATGGTGGAGGCGGCCCCGCTCCGTGTGCCCCACCACCGCCTCC AAAGGCGAAACCCGCCGTGGCACAGGTGGAGGGCGGGGGCGGCGGAATGG GTGCCGTTTCGTTCGTCGTGGAAACGCCGGCAGACATCAAGAGCAACGCG CGGGCAAAGAAGCTCACCGTGGGAGTATTGCAGCTCTCCGCGGAAGTTTC CCACTACGTCGTACCTGCCAAAGAATCCGCCGCTTACCTGCAAGCTAAGG AATATGTCTCCACACACAGGCATCAAGGAAGTGTTCCCTCGAAAGTCAAG GTGTCGATGTTGCTGCTTATTTTGCACGCCAACCAGGCGACGAACAACAC CGACTATCTTCTCCTGGCGAGCAATGACGTGTCCATCTTCTTCGACAACA GCTTCATCACCAAGACCAGCCTCACCTCCGTCTGTCCCGGAGAGTCCTTC CAGACCTTCCTAGGCATCGATCCCGCCGTTAAGATCACTGTTGGGCCGCT TCGCAAGACCAGCAAGAAGCGCGGCATCTTCTCCAAGTCCAACCACGTCA CGCACACCCACAGGTACCGAAGTTGTACACAGACGATCACCGAGATCGAC GAGAAAAGTAGAACCATAAGCTTTGAGACACTCACAGCGGTGGCAGGTAG CACGAACGCTACCCATGTTTCGATGCTTGCGTCGGTCTTCCGCTACGCTC GGAACTGGCGGTTCGTTGCGCATTTCGATCGCAGCACGTCGATCTCCAAC AAGAAGAAGGTGCCGGTGATCCTCAAGCAACCGCCACCTTCTAGCGTGTC CGAGTCCGAAGCCATCACCGACGATGCCCTCGCTTCCGCCGCCTTGGAGA TGTGCGAAGCGGGTGACGGGGGCAGCAGCAACGTCCAAACGCCGCCTGCG GTGAATGGCGTCTTAGGTGTTATCAAGAGCCCGTCGAACCACCTGGTGAG CCGACAGTTGGAGAGATCTTGGCCAATAGTTCAGAACGCTGCCCAACGAA ATGCTAGGCGGACCATAGCTGAAAGGTTGGACATATTTCGTAGAGAGAAG CATAACATCATGATGACAAGCAGTTATCAAGTCAACGTGCGATCGTTCCC GAGCGGATGAGGTCCGGGGGAATAAGAAGGTGCGCCGAGATGAATCAGAT GCGTGACAATGAGGAACATTCGCTCGATGCGCGTGATACGGGCTGGTTGT TGTGAGGCTCACCCATTAGTCACCAGGAGCAGTGCTATCGTTTCATTTAC TATCGTGTATCAGTATTGTACGTACAGTGTGGAGCTGCAGCCATATCATG GCACTCTGGTGGCATTGTCATATTTCAATTTTCCCTCCCTTTTCACTGAA TCGCGAAATGATCTGTGTCGCCTCCGCTCTTGTTTTACCCAAATCCATCG ATGCTCTGTCGTTGTTTCCGTTGGTTGCCGAT back to topprotein sequence of EsuBft2953_3a-0001 >EsuBft2953_3 ID=EsuBft2953_3|Name=EsuBft2953_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=569bp
MNMTTYPPTNSLKEAITELHKPPATSSASACVPKATEKVTKKPGRILITV DVQELGNIELEGLAPWVRRPLYPSFHLRDPLWKYMTRGATWSPSCTYYGM VTQSTTEDWKGVSLRLSTAEPTVHGTPPALEGKTVSLKPYRMPEPSFSKP RGAMGRKKSGAYSRRSSFGSVGECEEDGESSSLDDTMSAALCVEGYGGGA PGHGGGGPAPCAPPPPPKAKPAVAQVEGGGGGMGAVSFVVETPADIKSNA RAKKLTVGVLQLSAEVSHYVVPAKESAAYLQAKEYVSTHRHQGSVPSKVK VSMLLLILHANQATNNTDYLLLASNDVSIFFDNSFITKTSLTSVCPGESF QTFLGIDPAVKITVGPLRKTSKKRGIFSKSNHVTHTHRYRSCTQTITEID EKSRTISFETLTAVAGSTNATHVSMLASVFRYARNWRFVAHFDRSTSISN KKKVPVILKQPPPSSVSESEAITDDALASAALEMCEAGDGGSSNVQTPPA VNGVLGVIKSPSNHLVSRQLERSWPIVQNAAQRNARRTIAERLDIFRREK HNIMMTSSYQVNVRSFPSG back to topmRNA from alignment at Scaffold_211:15618..20112+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2953_3a-0001 ID=EsuBft2953_3a-0001|Name=EsuBft2953_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4495bp|location=Sequence derived from alignment at Scaffold_211:15618..20112+ (Ectocarpus subulatus male Bft15b) ATGAACATGACCACGTACCCGCCGACGAACAGCCTGAAGGAAGCCATCAC
CGAGCTCCACAAACCTCCGGCCACTTCATCTGCTTCCGCGTGTGTTCCGA
AAGCAACGGAGAAAGTGACGAAGAAACCGGGTAGGATACTCATCACCGTG
GACGTACAAGAGCTTGGCAACATCGAACTGGAGGTACGTTTGGGTAGTTG
GTTCTGCTTCGACAGAGAAAGGGGTTCTCGCCATCGCAGAAGGCGTGATT
GCACCCTTGGAACTAACGGTTCGATACCCGCCATCCTTAGGGTCTCGCCC
CCTGGGTGAGGCGGCCACTTTACCCTTCCTTCCATCTACGTGATCCATTG
TACGCGTGTGGCTACGCTGATGTCCTATCATGAAACTCAACTTGCCCGGT
AGGACCTGCTTCCCTTCCTGTCTTGACTTTGCCGGTGTGCGAACGAAAAA
ACAACATTCAACGAAACAGGTGGAAGTACATGACCCGTGGGGCGACTTGG
TCTCCTTCGTGCACGTACTACGGAATGGTCACACAGAGCACCACTGAGGA
CTGGAAAGGTACGATCCGCTCGTTAGTCTGGTAACCCTAACCCTAACCAT
GGGAGCCATCACGCCGTGGCACGGCCGTGAGTCAGGCGTAGGCTCGTTGG
CTTCAAGCGATAAAGTGCACAATAATTGTTCGTGGTAGAATTGCATTGGT
CGATGTGTCATTTACTGCACGCTGGCCGATGTGCGTGCAGCGTTTGTCTT
TCTCAAATAAAAGAGCTAGAACAGCAGATCCACACATTCCCATCTTGTCT
GTCCATCCTCGCTCCAAGCCGAACGCGTCATCGTTAACCCACGCCTTTCC
GCATTCCTACGTATTTACCTACACCAGGAGTGTCTCTTCGGCTGTCGACA
GCGGAGCCCACTGTCCACGGGACGCCACCTGCGCTGGAAGGCAAGACTGT
TTCTCTCAAACCCTATCGGATGCCGGAGCCCAGTTTCAGCAAACCTCGTG
GCGCCATGGTGAGGAGATGCAATGATTTCCGGGTGCGGCATTTTGTATTT
GTTGCATGAAATAGTACCATGGTAGTGTGTCATGGCTCCCCCATCCTCGC
GTCGAGCTAACTTGGCTTTGGTTCTGTGCGGAAGCAGAACGGGCCAGCGT
TTCCACAGTTGCTGCGCTTGTTGGCATAGAGACCACGCGGTGATGAGCTA
CACGGGTTCTGCTTGGATTTGGCCTGAATCTGCACATCCGCCTGAATAGA
CTAATTGTCCCACATTTTCTCGCGAAGTAATGCCTAGCTTCGTAGGACAT
CGTCACGAGCTAGTTTGCCACATCTGGTATGCACTTTGGCAGATATATCC
AGCAGACAGTTCACCCCCTGACCCCCCCCCGGGATCGTCGGATTTTTTTT
ACTTTCCCCTCATCACCTCGAAAATCTTTGAAAACTAGAAGGGAAGGAAG
AAGAGCGGAGCGTACAGTCGGCGATCGAGCTTCGGGAGTGTCGGTGAATG
CGAGGAGGACGGGGAGTCTTCAAGCCTAGATGACACCATGTCAGCGGCGC
TGTGCGTGGAGGGCTACGGCGGCGGCGCTCCTGGCCATGGTGGAGGCGGC
CCCGCTCCGTGTGCCCCACCACCGCCTCCAAAGGCGAAACCCGCCGTGGC
ACAGGTGGAGGGCGGGGGCGGCGGAATGGGTGCCGTTTCGTTCGTCGTGG
AAACGCCGGCAGACATCAAGTGAGTACGCCAGGCCAGACTGAATCAGCCC
ACGTTCGAAGTCCACGAAATCACGGCTCTCTTCATGGGTTTGGAAGCGAC
ACTACAACTGCTTCGGGCACAGTGAATGCAGCTGGTGGCGCCGCAGACTT
TCCAGTACCGCGTGCCATACGCCAGCTCGACAACCGCTCCGATTCGTGGA
TACGAGCGAAGACTTCGTATTGCGTCCCCAAATCTGAAAAAATTTAAGTA
TTACCAACCAAAACAAAAACACACAACACCCCTTATCTATTGCCCCCGTC
CAACTCAAGCCCCTCCCGGGAGCAAATTTTTCGTTCAGGTTACATCTACC
GTTGACCATTGCATGTTTTGGTTCAACTCTTGTCCGCATGACGCTAGTGG
ACCACCTATCGCTGATGACGGAGCGTGGTTGCAGGAGCTCAACCCCCTTG
TTCCTTTCTCTCCTTCCTCCTTCACGCCCTCCTCCTCCAGGAGCAACGCG
CGGGCAAAGAAGCTCACCGTGGGAGTATTGCAGCTCTCCGCGGAAGTTTC
CCACTACGTCGTACCTGCCAAAGAATCCGCCGCTTACCTGCAAGCTAAGG
TACAGCGAGATTGCGTTTCGTTCTCTGGAGAGGCGGTGGGGGGTGGGCAG
GGAGGGTAGTAGGGGAGAAGTTCATTCAGGAATATGTCTCCACACACAGG
CATCAAGGAAGTGTTCCCTCGAAAGTCAAGGTGTCGATGTTGCTGCTTAT
TTTGCACGCCAACCAGGCGACGAACAACACCGACTATCTTCTCCTGGCGA
GCAATGACGTGTCCATCTTCTTCGACAACAGCTTCATCACCAAGACCAGC
CTCACCTCCGTCTGTCCCGGAGAGTCCTTCCAGACCTTCCTAGGCATCGA
TCCCGCCGTTAAGGTGCGTGCATGAAGGAACGGGGACACCCCATGTGTCA
TGCAATATTTTTCGTTCGTGTATTGCTCCGTGAAAACATGTTTGGCCATC
GACTCTGGGCTCAAAGCCTACCTTCTTCGTGCGTCGACAAACGTGTTCCT
TCCTCGACCCTCTAGAATACTACCTGTCCTAGCGCACGTTTCCCTGTTCT
TCGACCCTGAAACGTATTGGTCTGAAATGCACCAGATCACTGTTGGGCCG
CTTCGCAAGACCAGCAAGAAGCGCGGCATCTTCTCCAAGTCCAACCACGT
CACGCACACCCACAGGTACCGAAGTTGTACACAGACGATCACCGAGATCG
ACGAGAAAAGTAGAACCATAAGCTTTGAGACACTCACAGCGGTGGCAGGT
AGCACGGTACGGAGTAAAAAAAGGGTGTTACACCCGATACTGGTTGTCTT
TTTCGCACCCTCACATTGCAGCGTTCACCCACGGGGATGATGATATTCGG
TATTTATGCCTTCACGGCTGCAAAAGTACGGCGGTATTATAGCTGTTGCG
GAATACCATCCGTAACCCTTAGCGACGGTCGACCGCGTCGGGGGATATGG
CATCTTGTTGCGGGGAGGTTGGTGCTTCCATTTTGACGAAGTTCCACGTA
CCCCTTATCCGTACCTTGCGAGTTCACGAAACAAAATAAGAGATCCACTG
ATGTTACTGACACTGTAGAACGCTACCCATGTTTCGATGCTTGCGTCGGT
CTTCCGCTACGCTCGGAACTGGCGGTTCGTTGCGCATTTCGATCGCAGCA
CGTCGATCTCCAACAAGAAGAAGGTGCCGGTTACCTGTGTCGTCGTGGAC
GCCATGCCGCGCTCCACCAACGAGATCATCAAGGCGAGCTCCTTATAATA
TACCGAATATCGCTGCAAGAGTCGGCCTTGAAGTGTTTCAGTTTTCGGGA
AGTCGATTCGAGTTCTGTTCTTTGTTCCTTTATGGAGCGCAGGATGCCTA
TTAGAGCGCTGCCTGATTCAGTTGGAGTAAGCGAAGTATGTCGGGGTAGG
TTCGCATTCCACCGGGCGAGCGACTCTCAGTTTGTGGTGCGCCCAGGGCG
ACCCATCTGCAAGACCTCTCGACGATCTTACCTGCGTCTCCCCCACGTTT
GTTTTGTTTAATCTGTGGTTCAAGAATAGCAGCAACGTTGACCAAAATAC
ATCTCTGGTGCAACAATACCCGATACAGGTGATCCTCAAGCAACCGCCAC
CTTCTAGCGTGTCCGAGTCCGAAGCCATCACCGACGATGCCCTCGCTTCC
GCCGCCTTGGAGATGTGCGAAGCGGGTGACGGGGGCAGCAGCAACGTCCA
AACGCCGCCTGCGGTGAATGGCGTCTTAGGTGTTATCAAGAGCCCGTCGA
ACCACCTGGTGAGCCGACAGTTGGAGAGATCTTGGCCAATAGTTCAGAAC
GCTGCCCAACGAAATGCTAGGCGGACCATAGCTGAAAGGTTGGACATATT
TCGTAGAGAGAAGCATAACATCATGATGACAAGCAGTTATCAAGTCAACG
TGCGATCGTTCCCGAGCGGATGAGGTCCGGGGGAATAAGAAGGTGCGCCG
AGATGAATCAGATGCGTGACAATGAGGAACATTCGCTCGATGCGCGTGAT
ACGGGCTGGTTGTTGTGAGGCTCACCCATTAGTCACCAGGAGCAGTGCTA
TCGTTTCATTTACTATCGTGTATCAGTATTGTACGTACAGTGTGGAGCTG
CAGCCATATCATGGCACTCTGGTGGCATTGTCATATTTCAATTTTCCCTC
CCTTTTCACTGAATCGCGAAATGATCTGTGTCGCCTCCGCTCTTGTTTTA
CCCAAATCCATCGATGCTCTGTCGTTGTTTCCGTTGGTTGCCGAT back to topCoding sequence (CDS) from alignment at Scaffold_211:15618..20112+ >EsuBft2953_3a-0001 ID=EsuBft2953_3a-0001|Name=EsuBft2953_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1710bp|location=Sequence derived from alignment at Scaffold_211:15618..20112+ (Ectocarpus subulatus male Bft15b) ATGAACATGACCACGTACCCGCCGACGAACAGCCTGAAGGAAGCCATCAC CGAGCTCCACAAACCTCCGGCCACTTCATCTGCTTCCGCGTGTGTTCCGA AAGCAACGGAGAAAGTGACGAAGAAACCGGGTAGGATACTCATCACCGTG GACGTACAAGAGCTTGGCAACATCGAACTGGAGGGTCTCGCCCCCTGGGT GAGGCGGCCACTTTACCCTTCCTTCCATCTACGTGATCCATTGTGGAAGT ACATGACCCGTGGGGCGACTTGGTCTCCTTCGTGCACGTACTACGGAATG GTCACACAGAGCACCACTGAGGACTGGAAAGGAGTGTCTCTTCGGCTGTC GACAGCGGAGCCCACTGTCCACGGGACGCCACCTGCGCTGGAAGGCAAGA CTGTTTCTCTCAAACCCTATCGGATGCCGGAGCCCAGTTTCAGCAAACCT CGTGGCGCCATGGGAAGGAAGAAGAGCGGAGCGTACAGTCGGCGATCGAG CTTCGGGAGTGTCGGTGAATGCGAGGAGGACGGGGAGTCTTCAAGCCTAG ATGACACCATGTCAGCGGCGCTGTGCGTGGAGGGCTACGGCGGCGGCGCT CCTGGCCATGGTGGAGGCGGCCCCGCTCCGTGTGCCCCACCACCGCCTCC AAAGGCGAAACCCGCCGTGGCACAGGTGGAGGGCGGGGGCGGCGGAATGG GTGCCGTTTCGTTCGTCGTGGAAACGCCGGCAGACATCAAGAGCAACGCG CGGGCAAAGAAGCTCACCGTGGGAGTATTGCAGCTCTCCGCGGAAGTTTC CCACTACGTCGTACCTGCCAAAGAATCCGCCGCTTACCTGCAAGCTAAGG AATATGTCTCCACACACAGGCATCAAGGAAGTGTTCCCTCGAAAGTCAAG GTGTCGATGTTGCTGCTTATTTTGCACGCCAACCAGGCGACGAACAACAC CGACTATCTTCTCCTGGCGAGCAATGACGTGTCCATCTTCTTCGACAACA GCTTCATCACCAAGACCAGCCTCACCTCCGTCTGTCCCGGAGAGTCCTTC CAGACCTTCCTAGGCATCGATCCCGCCGTTAAGATCACTGTTGGGCCGCT TCGCAAGACCAGCAAGAAGCGCGGCATCTTCTCCAAGTCCAACCACGTCA CGCACACCCACAGGTACCGAAGTTGTACACAGACGATCACCGAGATCGAC GAGAAAAGTAGAACCATAAGCTTTGAGACACTCACAGCGGTGGCAGGTAG CACGAACGCTACCCATGTTTCGATGCTTGCGTCGGTCTTCCGCTACGCTC GGAACTGGCGGTTCGTTGCGCATTTCGATCGCAGCACGTCGATCTCCAAC AAGAAGAAGGTGCCGGTGATCCTCAAGCAACCGCCACCTTCTAGCGTGTC CGAGTCCGAAGCCATCACCGACGATGCCCTCGCTTCCGCCGCCTTGGAGA TGTGCGAAGCGGGTGACGGGGGCAGCAGCAACGTCCAAACGCCGCCTGCG GTGAATGGCGTCTTAGGTGTTATCAAGAGCCCGTCGAACCACCTGGTGAG CCGACAGTTGGAGAGATCTTGGCCAATAGTTCAGAACGCTGCCCAACGAA ATGCTAGGCGGACCATAGCTGAAAGGTTGGACATATTTCGTAGAGAGAAG CATAACATCATGATGACAAGCAGTTATCAAGTCAACGTGCGATCGTTCCC GAGCGGATGA back to top
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