Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2871_3 |
| Protein domains | Coil |
| Protein domains | IPR005135 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 8 |
| Length | 221 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2871_3a-0001 ID=EsuBft2871_3a-0001|Name=EsuBft2871_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2212bp|location=Sequence derived from alignment at Scaffold_189:614169..617536+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATAGAAACAGAGAAGGTAAGGAGACAAGAGGCGAGGGCGACGGAGGA
AAAGAAAGGACCGAGCGGGGGAGGCGAGCAAGCAAGTCAGAAGGAGTCCG
AGAAGAAGCGGAAGGCGAACGATAGAGTGCGCAAAATCCCCGATAGGGTA
AAGCCCAAGCTGAGAGTCGGGTCGTGGAAGGTGTGCGGGTTCGTAAGGAG
TGAGTGCAAGCGGTTGGAAATAGCGGACCAAGTAGAACAAAGCGATCTAG
ATGTAGTGGGGATCCAAGAGACGTGGGAATTGAAGGATGGGGACGTGGGG
GGAGTCGGATTCCTGGTTAAGGAACACTTGTTTGACTTGGTGAGAACTTT
GGACAAATTGGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGTGGATTAGTCAGCAGTGGGAAGGGAAAAAGGGA
AGTTCTAGCAGGACACTACAAGAGACTTGGAGTGCCCTCGGAGAATGAAG
CTTTTGACCAAGTGTTTAAGAAGGAGGTGGACGCATGGGCCCAAAAAGAA
GAGACATCGCGCTATTACAAGATCGTTGACAACCAGAGCAAGAGCGATGG
TAAAGCCCTGCGGGACTCCGGAGCCGGCACTGCTGAGAGTGGCTCGGAGG
ACGAAGTAGAGAAGAATACCAAGGACAAAGTTCTGACCGCGATAGTGGAC
GCGAAGGCTGCCGCGAGGCATGACTCGGAGGAGACCAAGCAGAAGAAAGC
CGACCAGGCGGCCTCGCACTCCGCGATGGGGATGTGGGCCATCAACCAGG
GCAACGCCCGATGCGGGCCGGGCGCGAAGGCTACATCATTCCAAGAAGCT
NGGGCCATCAACCAGGGCAACGCCCGATGCGGGCCGGGCGCAAAGGCTAC
ATCATTCGAAGAAGCTGTTGCCGCCGACAACAACGCGTTGGGTTACCGCT
CCGGTGCAGCGGCCGGTGGCCGTGCCAGCGGTCGGGTGAGTCCGGCCAGC
AGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGGTGGCGCTGC
CAGCGGTCGATCGAGCCCGACCATGAGTACGGGCGGGCTAGACGACGACT
TCTCGCCCGCGGGGAGCGGGCCATCGAGGAAGGTTCCACCGCTTGGCGAC
TTGGTGAAGCACATGGGGTCGCTGACCATTCCGATGCTTGCGGAAAGTGC
CGGGGCGGATTACTTCCTCGACACGGGCTTCACGACNGACGACGACTTAT
CGCCCGCGGGGAGCGGGCCATCGAGGAAGGTTCCACTGCCTGGCGAATTG
GCGAAGCACATGGGGTCGCTGAGCATTTCGACGCTTGCGCAAAGTGCCGG
GGTCACCACGGAGGAGGCGGACTACTTCCTCAACACGGGCTTCACGCCCG
ACGAAGTTCAGCCGGAAAGGGCCGTGGCCATGATGGTGGTACTACTCGAC
GCAAGGCTTTGTATCCAGCGCGACGGAGACAGCGTCCAGCAGTTTGACGA
GTCGGTCATGTTTAAACTGCTCGAGCTCTACGGAATGGAAACGATGGACT
TCCGCAGCCTGCCGGAATCGAATAGGTTTCACAGCGGATGGCCCATAGAA
CGTGTTACGCCGGACAAGGTGCTTCAGGTTACGAAGCGGGTGGCGAGGTT
GTTGGTGCTTGGCGCCGGCGTGACGAACTCCGGGCTGTCCGCCGCCGGTC
AGACATCCATCCCCGGTTCTGCAACAGTGGGGGATGCGCGCGCCATGTCA
GGCATGGACCCTTCAGGGGCGGCGAGTGGGCCTTCGGGAAACCGTGGAAG
GAAGCCCCGTGCCAAGACCAATAAGCTCGCCGAGGATGGGCTAGACAGCT
TCATAGAGCGACAGGTGGCTGACGCTCGGGCACTTGCCGATCAGAAACGT
GAAGAGGACGAGAGGAGGCGGGCGGCGGAAGCTAAACGAGAAGTAGGGAG
GAGGCAAGAGCTCCTGGACATGATGGCCCACGAGAGGGCAATGCGGGAAG
ATGAAAGGAAACACGACAGACAAGAGCGTGAAGTGGAGAGGGCGGCTGCA
TGGGCAGAGCAAAAGGGAGATCGTGATCGCCAAATCAGGATGATGCAACT
CCAGGTAGACCTGGCGAAGGCGAAGGGCAACAATAACTAGCTAACTGGTT
GGGGTTGCTGTT back to topprotein sequence of EsuBft2871_3a-0001 >EsuBft2871_3 ID=EsuBft2871_3|Name=EsuBft2871_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=729bp
MIETEKVRRQEARATEEKKGPSGGGEQASQKESEKKRKANDRVRKIPDRV
KPKLRVGSWKVCGFVRSECKRLEIADQVEQSDLDVVGIQETWELKDGDVG
GVGFLVKEHLFDLVRTLDKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXGGLVSSGKGKREVLAGHYKRLGVPSENEAFDQVFKKEVDAWAQKE
ETSRYYKIVDNQSKSDGKALRDSGAGTAESGSEDEVEKNTKDKVLTAIVD
AKAAARHDSEETKQKKADQAASHSAMGMWAINQGNARCGPGAKATSFQEA
XAINQGNARCGPGAKATSFEEAVAADNNALGYRSGAAAGGRASGRVSPAS
SIGGARPASEASAGGAASGRSSPTMSTGGLDDDFSPAGSGPSRKVPPLGD
LVKHMGSLTIPMLAESAGADYFLDTGFTTDDDLSPAGSGPSRKVPLPGEL
AKHMGSLSISTLAQSAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLD
ARLCIQRDGDSVQQFDESVMFKLLELYGMETMDFRSLPESNRFHSGWPIE
RVTPDKVLQVTKRVARLLVLGAGVTNSGLSAAGQTSIPGSATVGDARAMS
GMDPSGAASGPSGNRGRKPRAKTNKLAEDGLDSFIERQVADARALADQKR
EEDERRRAAEAKREVGRRQELLDMMAHERAMREDERKHDRQEREVERAAA
WAEQKGDRDRQIRMMQLQVDLAKAKGNNN back to topmRNA from alignment at Scaffold_189:614169..617536+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2871_3a-0001 ID=EsuBft2871_3a-0001|Name=EsuBft2871_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3368bp|location=Sequence derived from alignment at Scaffold_189:614169..617536+ (Ectocarpus subulatus male Bft15b)
ATGATAGAAACAGAGAAGGTAAGGAGACAAGAGGCGAGGGCGACGGAGGA
AAAGAAAGGACCGAGCGGGGGAGGCGAGCAAGCAAGTCAGAAGGAGTCCG
AGAAGAAGCGGAAGGCGAACGATAGAGTGCGCAAAATCCCCGATAGGGTA
AAGCCCAAGCTGAGAGTCGGGTCGTGGAAGGTGTGCGGGTTCGTAAGGAG
TGAGTGCAAGCGGTTGGAAATAGCGGACCAAGTAGAACAAAGCGATCTAG
ATGTAGTGGGGATCCAAGAGACGTGGGAATTGAAGGATGGGGACGTGGTA
AGCAAACTAGGGAAATACCGGTGGGTAGGGAAGGCAAGAAAAGGCTTAGA
CCCGAAGAAAAGGGGGCAGGGGGGAGTCGGATTCCTGGTTAAGGAACACT
TGTTTGACTTGGTGTAAGTAGTGGTGAAAACGGAGTTCGAGGAAAGGCTA
TGGCTTAAGATACCTGGGGAGCGGGGTGAGAAATATTTGTTTCTAGGGAA
CGTATACGTCCCACCGTCGTCGAAGAAAGTCGCAAGCAAGGCGCAGGAGA
ACTTTGGACAAATTGGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGGTGGATTAGTCAGCAGTGGGAAGGGAAAA
AGGGAAGTTCTAGCAGGACACTACAAGAGACTTGGAGTGCCCTCGGAGAA
TGAAGCTTTTGACCAAGTGTTTAAGAAGGAGGTGGACGCATGGGCCCAAA
AAGAAGAGACATCGCGCTATTACAAGATCGTTGACAACCAGAGCAAGAGC
GATGGTAAAGCCCTGCGGGACTCCGGAGCCGGCACTGCTGAGAGTGGCTC
GGAGGACGAAGTAGAGAAGAATACCAAGGTCCAGCTGGCGAGGGTCCAGA
GCCAGTGAGCTATCTCTACCTTTTGTGACTGAGTGTACACGATCATGGCA
CAGTCCAAACAAGACGGGCACGAATATCTGCACATGGAGAATCCACAATC
CATAGACTATCGTGAAACACCTGCGCTGTCCCGACCGAAGAAAATGCCTG
CCGGCGTCACCAACGTTACACTTGCAGATAAAAGGGGTACGCACAGGGTT
AGCCGTAAGTCCAACTTAAAATGCGCAGCATGACAAAAGAAAGGCAGAAG
TAGATAGACAGCACGAAAGCCCGAGTGCTACACGCCAGGCGACGCAAAAC
GTGCAGAGAGTTAGCTTGCTGAGACGGTCCTTCACCCACAAAATCAAAAC
AGCGTCGAGGTTTTCACTCCCACCTTGTATTGTTTCGGGGCGTGACGTAG
CAGTGTTGACACGGAAGTACAAAACAGACGATGCATATAGCTATCGCCGA
CGCTAGTGATGCAATTTGTACGTCGTAGAGCTGACGAGCTGCCGCGCCGC
TGTTGCTTCTTGCCCGCGATGTGCCGCACAGGACAAAGTTCTGACCGCGA
TAGTGGACGCGAAGGCTGCCGCGAGGCATGACTCGGAGGAGACCAAGCAG
AAGAAAGCCGACCAGGCGGCCTCGCACTCCGCGATGGGGATGTGGGCCAT
CAACCAGGGCAACGCCCGATGCGGGCCGGGCGCGAAGGCTACATCATTCC
AAGAAGCTGTTGCCGCCGACAACATCGCGTTGGGTTCCCGCTCCGGTGCA
GNGGGCCATCAACCAGGGCAACGCCCGATGCGGGCCGGGCGCAAAGGCTA
CATCATTCGAAGAAGCTGTTGCCGCCGACAACAACGCGTTGGGTTACCGC
TCCGGTGCAGCGGCCGGTGGCCGTGCCAGCGGTCGGGTGAGTCCGGCCAG
CAGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGGTGGCGCTG
CCAGCGGTCGATCGAGCCCGACCATGAGTACGGGCGGGCTAGACGACGAC
TTCTCGCCCGCGGGGAGCGGGCCATCGAGGAAGGTTCCACCGCTTGGCGA
CTTGGTGAAGCACATGGGGTCGCTGACCATTCCGATGCTTGCGGAAAGTG
CCGGGGTCACCACGGAGGAGGCGGANGCATTTCGACGCTTGCGCAAAGTG
CCGGGGTCACCACGGAGGAGGCGGATTACTTCCTCGACACGGGCTTCACG
ACNGACGACGACTTATCGCCCGCGGGGAGCGGGCCATCGAGGAAGGTTCC
ACTGCCTGGCGAATTGGCGAAGCACATGGGGTCGCTGAGCATTTCGACGC
TTGCGCAAAGTGCCGGGGTCACCACGGAGGAGGCGGACTACTTCCTCAAC
ACGGGCTTCACGCCCGACGAAGTTCAGCCGGAAAGGGCCGTGGCCATGAT
GGTGGTACTACTCGACGCAAGGCTTTGTATCCAGCGCGACGGAGACAGCG
TCCAGCAGTACATGGATCGTCTTGGTGAAGAGGATTGTGAGCTGCCCGGG
TTTGATGGGTTTGACGAGTCGGTCATGTTNTTGATAGGTTTGACGAGTCG
GTCATGTTTAAACTGCTCGAGCTCTACGGAATGGAAACGATGGACTTCCG
CAGCCTGCCGGAATCGAATAGGTTTCACAGCGGATGGCCCATAGAACGTG
TTACGCCGGACAAGGTGCTTCAGGTTACGAAGCGGGTGGCGAGGTTGTTG
GTGCTTGGCGCCGGCGTGACGAACTCCGGGCTGTCCGCCGCCGGTCAGAC
ATCCATCCCCGGTTCTGCAACAGTGGGGGATGCGCGCGCCATGTCAGGCA
TGGACCCTTCAGGGGCGGCGAGTGGGCCTTCGGGAAACCGTGGAAGGAAG
CCCCGTGCCAAGACCAATAAGCTCGCCGAGGATGGGCTAGACAGGTAAAA
CTGTTCGTCGACTCTGCCCATGTCTTGATTCTCGCAACTCCTTCGTGTGG
TAGACGCTGTGCATTATTGTTAGATTATTTTGGTGGACGTAACCTGTACC
AGAGAAGTGTCATCGCAGCATTATTGTTAGCTACTCCATCAGGGAGGTGC
CAGAGCTTACCCTACCCTGGTTCCTCTCTTGCGTCGTTGTGCCACGTGTC
CCAGCTTCATAGAGCGACAGGTGGCTGACGCTCGGGCACTTGCCGATCAG
AAACGTGAAGAGGACGAGAGGAGGCGGGCGGCGGAAGCTAAACGAGAAGT
AGGGAGGAGGCAAGAGCTCCTGGACATGATGGCCCACGAGAGGGCAATGC
GGGAAGATGAAAGGAAACACGACAGACAAGAGCGTGAAGTGGAGAGGGCG
GCTGCATGGGCAGAGCAAAAGGGAGATCGTGATCGCCAAATCAGGATGAT
GCAACTCCAGGTAGACCTGGCGAAGGCGAAGGGCAACAATAACTAGCTAA
CTGGTTGGGGTTGCTGTT back to topCoding sequence (CDS) from alignment at Scaffold_189:614169..617536+ >EsuBft2871_3a-0001 ID=EsuBft2871_3a-0001|Name=EsuBft2871_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2190bp|location=Sequence derived from alignment at Scaffold_189:614169..617536+ (Ectocarpus subulatus male Bft15b)
ATGATAGAAACAGAGAAGGTAAGGAGACAAGAGGCGAGGGCGACGGAGGA
AAAGAAAGGACCGAGCGGGGGAGGCGAGCAAGCAAGTCAGAAGGAGTCCG
AGAAGAAGCGGAAGGCGAACGATAGAGTGCGCAAAATCCCCGATAGGGTA
AAGCCCAAGCTGAGAGTCGGGTCGTGGAAGGTGTGCGGGTTCGTAAGGAG
TGAGTGCAAGCGGTTGGAAATAGCGGACCAAGTAGAACAAAGCGATCTAG
ATGTAGTGGGGATCCAAGAGACGTGGGAATTGAAGGATGGGGACGTGGGG
GGAGTCGGATTCCTGGTTAAGGAACACTTGTTTGACTTGGTGAGAACTTT
GGACAAATTGGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGTGGATTAGTCAGCAGTGGGAAGGGAAAAAGGGA
AGTTCTAGCAGGACACTACAAGAGACTTGGAGTGCCCTCGGAGAATGAAG
CTTTTGACCAAGTGTTTAAGAAGGAGGTGGACGCATGGGCCCAAAAAGAA
GAGACATCGCGCTATTACAAGATCGTTGACAACCAGAGCAAGAGCGATGG
TAAAGCCCTGCGGGACTCCGGAGCCGGCACTGCTGAGAGTGGCTCGGAGG
ACGAAGTAGAGAAGAATACCAAGGACAAAGTTCTGACCGCGATAGTGGAC
GCGAAGGCTGCCGCGAGGCATGACTCGGAGGAGACCAAGCAGAAGAAAGC
CGACCAGGCGGCCTCGCACTCCGCGATGGGGATGTGGGCCATCAACCAGG
GCAACGCCCGATGCGGGCCGGGCGCGAAGGCTACATCATTCCAAGAAGCT
NGGGCCATCAACCAGGGCAACGCCCGATGCGGGCCGGGCGCAAAGGCTAC
ATCATTCGAAGAAGCTGTTGCCGCCGACAACAACGCGTTGGGTTACCGCT
CCGGTGCAGCGGCCGGTGGCCGTGCCAGCGGTCGGGTGAGTCCGGCCAGC
AGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGGTGGCGCTGC
CAGCGGTCGATCGAGCCCGACCATGAGTACGGGCGGGCTAGACGACGACT
TCTCGCCCGCGGGGAGCGGGCCATCGAGGAAGGTTCCACCGCTTGGCGAC
TTGGTGAAGCACATGGGGTCGCTGACCATTCCGATGCTTGCGGAAAGTGC
CGGGGCGGATTACTTCCTCGACACGGGCTTCACGACNGACGACGACTTAT
CGCCCGCGGGGAGCGGGCCATCGAGGAAGGTTCCACTGCCTGGCGAATTG
GCGAAGCACATGGGGTCGCTGAGCATTTCGACGCTTGCGCAAAGTGCCGG
GGTCACCACGGAGGAGGCGGACTACTTCCTCAACACGGGCTTCACGCCCG
ACGAAGTTCAGCCGGAAAGGGCCGTGGCCATGATGGTGGTACTACTCGAC
GCAAGGCTTTGTATCCAGCGCGACGGAGACAGCGTCCAGCAGTTTGACGA
GTCGGTCATGTTTAAACTGCTCGAGCTCTACGGAATGGAAACGATGGACT
TCCGCAGCCTGCCGGAATCGAATAGGTTTCACAGCGGATGGCCCATAGAA
CGTGTTACGCCGGACAAGGTGCTTCAGGTTACGAAGCGGGTGGCGAGGTT
GTTGGTGCTTGGCGCCGGCGTGACGAACTCCGGGCTGTCCGCCGCCGGTC
AGACATCCATCCCCGGTTCTGCAACAGTGGGGGATGCGCGCGCCATGTCA
GGCATGGACCCTTCAGGGGCGGCGAGTGGGCCTTCGGGAAACCGTGGAAG
GAAGCCCCGTGCCAAGACCAATAAGCTCGCCGAGGATGGGCTAGACAGCT
TCATAGAGCGACAGGTGGCTGACGCTCGGGCACTTGCCGATCAGAAACGT
GAAGAGGACGAGAGGAGGCGGGCGGCGGAAGCTAAACGAGAAGTAGGGAG
GAGGCAAGAGCTCCTGGACATGATGGCCCACGAGAGGGCAATGCGGGAAG
ATGAAAGGAAACACGACAGACAAGAGCGTGAAGTGGAGAGGGCGGCTGCA
TGGGCAGAGCAAAAGGGAGATCGTGATCGCCAAATCAGGATGATGCAACT
CCAGGTAGACCTGGCGAAGGCGAAGGGCAACAATAACTAG back to top
|