Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2787_3 |
| Protein domains | IPR000048 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Length | 123 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0031227 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2787_3a-0001 ID=EsuBft2787_3a-0001|Name=EsuBft2787_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1239bp|location=Sequence derived from alignment at Scaffold_360:309691..312235+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGCGGGGAGTGGAGGGAGGGGCGGGGGAAACGCTTCCCGCAGGAAA
GGAGGGCGGCGCAGGAGACACGCTTCCCGCGGGGAGCGAGGATGGGCCCG
CGGCGGCGGCGGTGGCGGCGGTGGCGGCGGCGCAAAGGCTGGCGCTGAGG
GTGGAGGGAGAGGCTGGGGGGACGCTACCCGCGATCAGCGAGGATGGGGC
AGGGAGGAACGCGATGGCTACTATCGCCCGGCCCGCGATGATGGCCACGG
CGTCGGTACGGCACGCGGTGCCGGCGGTGCCGGCGGTGCCGGCGGCACAA
GGGCGGGCGCGAAGGGTGGAGGGGGAGGCGGGGGAAACGCTACCCGCGAT
TGGCCAGGACGGGACCGGGGCGAAACCTTTAGGCACTACGGCCCACAACC
CGGTGATGCCGTCGGTGCGTCACGCCGTGGCGGTGGCAGCGGCGGCGGCG
GCGGCGGCGGCGGCGGGGGTGGTGGTGGTGGTGGCGGAGGCCACATATCC
CCGTTGCGAGGTGGCAGGGCACGAGTTCCCACCCACGCTGTTCCGAGCAA
ACGCGGTGGCGGCACACGGCGACAGGGGTCACTTCCAGTCGGCGCAAGGT
GGAAGTCACGGCCTTGGGGGAGGGACGGCAAACAGGGGAGGGCCGGACAT
GGGGGTGGATGCGGCGGGGCCCATGGCGCGGGCGGGGCGGACGGGTTACC
CAGCAAGGGGCTTCGGGGTGGAGGGTGCGGCGGTGACACCCAACACCACG
GGAACCCCTGGGGTGGGGCCGCGTGCGTTGGCGGGGATTGTGGGCAACGG
CCGATGGTCCGACACCCGTTTGGTGGGTGTTTACTTGGCGGTGGTTGCGC
TTTGGGGCTATGCATGCATCGTGCGCGGCGTGTCCGAGCTGCTCTTGTGC
CTGACGCCGTGCTTTCGTGGAGTCCCGGGCCGCTCGGGAGAAGCGGCAGC
CGCGGCGGCGGTGGCGGCGGCGCTCGAGGGGGCGGTGGCTAGCGTGGTGG
AGGCAGCAGACGCAGCAGCGCGGGCGCAGGCGGCCCGGGAGGCGGTGATG
AGGGGCCGGGTGGGGAGGGAGTTCGCGCGCGGAGAACGCACCCGAATCAC
GTCGATGGTTGTCCTGGTGCAGGCCTTATACCGGGGGAGGGCTGCCCGCC
GAGAGGCGGATGTGCTGCGGGCGGCGATTCTGACGAGGGCGAGGGCGAAG
CGGCAGCAGCAGCGCAGGAGCAGGCGGCGCGGGAGGTAA back to topprotein sequence of EsuBft2787_3a-0001 >EsuBft2787_3 ID=EsuBft2787_3|Name=EsuBft2787_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=412bp
MARGVEGGAGETLPAGKEGGAGDTLPAGSEDGPAAAAVAAVAAAQRLALR
VEGEAGGTLPAISEDGAGRNAMATIARPAMMATASVRHAVPAVPAVPAAQ
GRARRVEGEAGETLPAIGQDGTGAKPLGTTAHNPVMPSVRHAVAVAAAAA
AAAAAGVVVVVAEATYPRCEVAGHEFPPTLFRANAVAAHGDRGHFQSAQG
GSHGLGGGTANRGGPDMGVDAAGPMARAGRTGYPARGFGVEGAAVTPNTT
GTPGVGPRALAGIVGNGRWSDTRLVGVYLAVVALWGYACIVRGVSELLLC
LTPCFRGVPGRSGEAAAAAAVAAALEGAVASVVEAADAAARAQAAREAVM
RGRVGREFARGERTRITSMVVLVQALYRGRAARREADVLRAAILTRARAK
RQQQRRSRRRGR back to topmRNA from alignment at Scaffold_360:309691..312235+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2787_3a-0001 ID=EsuBft2787_3a-0001|Name=EsuBft2787_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2545bp|location=Sequence derived from alignment at Scaffold_360:309691..312235+ (Ectocarpus subulatus male Bft15b)
ATGGCGCGGGGAGTGGAGGGAGGGGCGGGGGAAACGCTTCCCGCAGGAAA
GGAGGGCGGCGCAGGAGACACGCTTCCCGCGGGGAGCGAGGATGGGGTAG
GGACGAAAGCCGGGGCAGGTACCCCCCCCCCCCNCCAGCGGTGCAGCCCG
CGGCGGCGGCGGTGGCGGCGGTGGCGGCGGCGCAAAGGCTGGCGCTGAGG
GTGGAGGGAGAGGCTGGGGGGACGCTACCCGCGATCAGCGAGGATGGGGC
AGGGAGGAACGCGATGGCTACTATCGCCCGGCCCGCGATGATGGCCACGG
CGTCGGTACGGCACGCGGTGCCGGCGGTGCCGGCGGTGCCGGCGGCACAA
GGGCGGGCGCGAAGGGTGGAGGGGGAGGCGGGGGAAACGCTACCCGCGAT
TGGCCAGGACGGGACCGGGGCGAAACCTTTAGGCACTACGGCCCACAACC
CGGTGATGCCGTCGGTGCGTCACGCCGTGGCGGTGGCAGCGGCGGCGGCG
GCGGCGGCGGCGGCGGGGGTGGTGGTGGTGGTGGCGGAGGCCACATATCC
CCGTTGCGAGGTGGCAGGGCACGAGTTCCCACCCACGCTGTTCCGAGCAA
ACGCGGTGGCGGGTACAGCAGTTCCCGGGCGGGGCCGACGTTGCACGGAC
CGGGAATAGCACACGGCGACAGGGGTCACTTCCAGTCGGCGCAAGGTGGA
AGTCACGGCCTTGGGGGAGGGACGGCAAACAGGGGAGGGCCGGACATGGG
GGTGGATGCGGCGGGGCCCATGGCGCGGGCGGGGCGGACGGGTTACCCAG
CAAGGGGCTTCGGGGTGGAGGGTGCGGCGGTGACACCCAACACCACGGGA
ACCCCTGGGGTGGGGCCGCGTGCGTTGGCGGGGATTGTGGGCAACGGCCG
ATGGTCCGACACCCGTTTGGTGGGTGTTTACTTGGCGGTGGTTGCGCTTT
GGGGCTATGCATGCATCGTGCGCGGCGTGTCCGAGCTGCTCTTGTGCCTG
ACGCCGTGCTTTCGTGGAGTCCCGGGTAGGGTAGTGTTGCTTTCGCGAGG
CGGAAGAACGTCCTATCCCGAAAAGACAAGGAAATTGAGCAGAGGTTGCG
GGGTGGTTTGCAGTATTGCTATTTTTACTCTCGCGCTCTGCCCGAGAGAA
GTACGGCTGCTGTCGTGAGTATGCTTACCTCATTGACTCGGCGACGCAAG
AACAACGCGATGTCATCCTTATCCTTTCATCATTTTCCACCCTGCAAGTC
ATTACTGAACGTCCTTCCTCTCCTGTTGCATCGTGCCGCTTTCGGGGACC
CCGTTCGGCATACATGCACGTCGCGCCAATGCCTCGGCAGTCCGAGGGTA
GGAACACCCGAATGCAGGCCGCTCGGGAGAAGGTACGCCTGCCTAATAGC
AGACAGCGGTAGGCCCCTACCATCGCAATATATACACCGATGGTGTAGTC
ACGATAGCTAAATATACAAGATCGCAGATGGCTGGGTCTTGTGCTTCCCT
TTGTTTTTGTTTCAGTTTTGGGGACGCAATATCAAGAATGTTTGGACTAG
ATTCCCATTTGTGAGCTCGATGGCAAGTGTCAGACGCAATCGAACGCCAA
TGGTGGAAAAGGAGCCTGTGTTCCGCCCCTTGTTTATCGAGTATCATACA
ACCTGGCAATCAAACGCCGTGCCTCTGGTACTCTCACGTGCGGGTGCCGC
CTTTCAGAGGGAGAGGGCAGCGGCAGCCGCGGCGGCGGTGGCGGCGGCGC
TCGAGGGGGCGGTGGCTAGCGTGGTGGAGGCAGCAGACGCAGCAGCGCGG
GCGCAGGCGGCCCGGGAGGTAAGGGGCCTTTTATTTCGCCACTGTCGACG
ATCAGGAGTAACAAGGGGGGGGGGTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGCTGCAGTTGTTGGTTTTGGAAGGGGACGGTGTGGGTGGACCCGA
CGGGCTGTCGAGCGGTTGACACGGGTGTCTCCTAAGGCTGACGCGTTGAC
TAATGCACGATTGATCACCCGCAACGTTCAGTGGTAGATGTATCGCGAGG
TTTGTGGACAGCTCGCACTGACCCAGTGCGTGTGCGAGTACACCCATTGA
GAGTTTGCTGCCCACGGCATCACCCCACTTGTACCGCCCCGTCCCATGGC
AACAACAACGACCTCACCTGCACTCTACCGCCGCACTACACCAGACCATG
TATACTGTATGTGTCGCCGATCATCTTCCTTTGTGCGAAAACTTCCCGTG
TTCTGAATCGACCGTGCACTGCTGTCGGTACGCCTGCAGGCGGTGATGAG
GGGCCGGGTGGGGAGGGAGTTCGCGCGCGGAGAACGCACCCGAATCACGT
CGATGGTTGTCCTGGTGCAGGCCTTATACCGGGGGAGGGCTGCCCGCCGA
GAGGCGGATGTGCTGCGGGCGGCGATTCTGACGAGGGCGAGGGCGAAGGT
TGCCGTATCTGTGCAGCGGGCATTCCGGGCTCGGCGGCGGAGCAGGGCGG
AGGCAGCGGCAGCAGCAGCGCAGGAGCAGGCGGCGCGGGAGGTAA back to topCoding sequence (CDS) from alignment at Scaffold_360:309691..312235+ >EsuBft2787_3a-0001 ID=EsuBft2787_3a-0001|Name=EsuBft2787_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1239bp|location=Sequence derived from alignment at Scaffold_360:309691..312235+ (Ectocarpus subulatus male Bft15b)
ATGGCGCGGGGAGTGGAGGGAGGGGCGGGGGAAACGCTTCCCGCAGGAAA
GGAGGGCGGCGCAGGAGACACGCTTCCCGCGGGGAGCGAGGATGGGCCCG
CGGCGGCGGCGGTGGCGGCGGTGGCGGCGGCGCAAAGGCTGGCGCTGAGG
GTGGAGGGAGAGGCTGGGGGGACGCTACCCGCGATCAGCGAGGATGGGGC
AGGGAGGAACGCGATGGCTACTATCGCCCGGCCCGCGATGATGGCCACGG
CGTCGGTACGGCACGCGGTGCCGGCGGTGCCGGCGGTGCCGGCGGCACAA
GGGCGGGCGCGAAGGGTGGAGGGGGAGGCGGGGGAAACGCTACCCGCGAT
TGGCCAGGACGGGACCGGGGCGAAACCTTTAGGCACTACGGCCCACAACC
CGGTGATGCCGTCGGTGCGTCACGCCGTGGCGGTGGCAGCGGCGGCGGCG
GCGGCGGCGGCGGCGGGGGTGGTGGTGGTGGTGGCGGAGGCCACATATCC
CCGTTGCGAGGTGGCAGGGCACGAGTTCCCACCCACGCTGTTCCGAGCAA
ACGCGGTGGCGGCACACGGCGACAGGGGTCACTTCCAGTCGGCGCAAGGT
GGAAGTCACGGCCTTGGGGGAGGGACGGCAAACAGGGGAGGGCCGGACAT
GGGGGTGGATGCGGCGGGGCCCATGGCGCGGGCGGGGCGGACGGGTTACC
CAGCAAGGGGCTTCGGGGTGGAGGGTGCGGCGGTGACACCCAACACCACG
GGAACCCCTGGGGTGGGGCCGCGTGCGTTGGCGGGGATTGTGGGCAACGG
CCGATGGTCCGACACCCGTTTGGTGGGTGTTTACTTGGCGGTGGTTGCGC
TTTGGGGCTATGCATGCATCGTGCGCGGCGTGTCCGAGCTGCTCTTGTGC
CTGACGCCGTGCTTTCGTGGAGTCCCGGGCCGCTCGGGAGAAGCGGCAGC
CGCGGCGGCGGTGGCGGCGGCGCTCGAGGGGGCGGTGGCTAGCGTGGTGG
AGGCAGCAGACGCAGCAGCGCGGGCGCAGGCGGCCCGGGAGGCGGTGATG
AGGGGCCGGGTGGGGAGGGAGTTCGCGCGCGGAGAACGCACCCGAATCAC
GTCGATGGTTGTCCTGGTGCAGGCCTTATACCGGGGGAGGGCTGCCCGCC
GAGAGGCGGATGTGCTGCGGGCGGCGATTCTGACGAGGGCGAGGGCGAAG
CGGCAGCAGCAGCGCAGGAGCAGGCGGCGCGGGAGGTAA back to top
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