Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1809_6 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 240 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1809_6a-0001 ID=EsuBft1809_6a-0001|Name=EsuBft1809_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2404bp|location=Sequence derived from alignment at Scaffold_350:1536..6119- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGTGGTCGTGGACAAGCGTGTCAACGACAGAACCTTCATCTATCTCTAGG
AGCAAGCCACCGCCCACGGCTTCACTCCTTGAAACTTGGCGTCAGCTGGC
ATTACACGAGGACACCATGTCCAGCGGCAACGTGGAACTCCTGGGCGACA
ATGTGGAAATCCTCGACTACGAACCCGAGGGCGAGGCTCCCACTGCAGAG
TAGTTTCCAGCGGCGAGTGCAGAAGACGAGAGCCCCCCCATGTCCATGGT
GTTCACCGTCGATGATTTGCTGGACAACATCGCCACAGCAGATCCGGCGG
AACTGGAGCGGACCTACAACACCGGACGTGTCTCTCTGGAGGATATCGTA
GAGCGGCCCATCTGTCGTCCGATTCCCCCTTTTCGTTCCTCCTTTCTCGC
TCCCGCCGGAAGACAGATTAATCCGCTTGCCCCACGACGAGTTTATGGAG
TACCAACGGTTGAACGAGATGTGGTGCGACGGTCTTGCCGGGAACATAGC
AGAGGCGGAGGCGCGAGAGCAGGCGAAGCGCGAGGACGCGGAGCGCTTGG
CGGAACGGGAGGCTGCTCTGGCCGCTGCGGCGAGGAAGCAGGAGGAGGAG
CGTGAGGCTGTTCGGGCTGCTGCGGCGAGGAAGCAGGAGGAGGAGCGTGA
GGCTGCTCTGGCTGCTGCCGCGAGGAAGCAGGAGGAGAAGCGTGCGGCTG
TTCTGGCGGAGCGTGAGGCGTATCTCCAAGCGGCTCGGACGAAGCAGGGG
GCGCTCCGATCGCGGCTGAAGGAGCTGGAGCCCCGCCACCAGGACCCGCG
AGCAGCCCCCCACCCCCTTCGCCGTGTTATCGTCCCCGTCCCCACGCAAT
CCCAGGTGCACCTTGGCTCCCATCGTACCGCCTCGCCGCACGAGAAGGAG
CGCGAGGTGGCGGCGTCTCCGACGAACGAACAGGAGCGGAAGAGGACAGC
GACTCCAGAGTTTTCGGTTACTTGGGTCTTCCGGCTGGTGCTGAAAACGG
GGCATCGTTTGCGGCGGCAACCACGGTATACGAGTTCCACGTTGGAGATA
CAGCGTTTCTGTCCCGCCCGCTGGAGATGCCTGCAGAAGGTGTCACCTTC
CACGACGAGGATAAATTCGCAGCTCTTTTTGCATGGGCTGGCATCAAACA
ACTTGTCCGTGCACCATTCCCCCCACCGCACACATTTGCTTTCGGGCACA
TCTACCACACACCGTACCTCGCGAAACTTCCGCCTTCTTCGCGGCAGTCC
GTGTTCCAGCTGTTGTTCGCTCTCCGTCGTGCCACCTGTCATGAAGGTCC
TCAAGGAACGTCGGTGGTGACCCAGGAGGGAGGACTCTAGCTGCCTCTTG
CTCGTGCTGCTCGATCAACGACTTCAAGCACGATCAACAAGCCCCCCGGC
AGGCCTTTTCACGCCCTGCACATGGTTCTGGAGAGGACAAGGATTTCAGT
AGTTCGGCGGCTCCGGTGTCCAAAGCTGGAAGAACCGTTGGGGCGACCGG
GATTCGACGGCCAAGAGCGGGACGGACGACCACCACCGCTTCACCCAGTC
TTCGCGAGGGCGCGGCGTCGGATATAACAGGCGAGGGCGAACCGTGGGAA
ACCAGCCTACGAGGTCTTCGCCGGCGAGTCGCCATCGCCGGAGCAGGAGT
CGGAGCGCAGAGCGACAACAGCGCACCAATCCTTCGTCTAGGCGTGGGCG
CAGCCGGAGCGGAGACCGTCGTGGGAGAAACACGCCTCCGTCTAGGCGTA
GCCGCAGCCGGAGCCAGAACCAGAGCGGGGGCAATAGCAGGGCGACTAGC
ACTGACAGCAGTCGCGGTGGGAAAGGGCGACGGAGGTCAGGCCACGGTAG
AAAACCATCTGCGCAAGGAACCGGCAGGGCCCTCGACGTACGCCTTCTTC
ATCCAGAAATTGGCGGCCGCCTGGGACACTCAAGACAAGAGCTCGGGGAT
TGATCGTCTTCGCAGTTTTGGCGTATCCAACGGCGAGACTTACGGAGAAT
ACATCCGTCGCTTTAAGGCTCTGGCCATGACCGTCATCGTTTCCCACCAC
GCGTTCAAGCCTTCGGATGCGCAAGTGCAGATAGCTGTTCGAGACTCCAT
GTTGAAGCAGTTTCCGGTAGTGTCTGGGCAGGTGTACAAGGATGAGCAGC
TCTCCATGGAAGCCCCTTTTGGGCGACATGCTTCGTGTCTGGATGATATG
TGGGATGTGTTGGACAAGCGTGCGTTCGCGCACACGCCGGCGGTGCATGG
AGATGATTTCTTTTCGGTATCTTCCACGAATGCTAGGAGTTCGTCTGCTG
TTTCGCGTGCTGTAGCTTCTTCGGCGTTGCGTTCGACGGTGACCCCTTCG
TGGAGCCAAGGTTCTTCGGCCGCCGTGATGAGTGTTGACCCTCTACCTAA
TCAT back to topprotein sequence of EsuBft1809_6a-0001 >EsuBft1809_6 ID=EsuBft1809_6|Name=EsuBft1809_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=291bp
MEYQRLNEMWCDGLAGNIAEAEAREQAKREDAERLAEREAALAAAARKQE
EEREAVRAAAARKQEEEREAALAAAARKQEEKRAAVLAEREAYLQAARTK
QGALRSRLKELEPRHQDPRAAPHPLRRVIVPVPTQSQVHLGSHRTASPHE
KEREVAASPTNEQERKRTATPEFSVTWVFRLVLKTGHRLRRQPRYTSSTL
EIQRFCPARWRCLQKVSPSTTRINSQLFLHGLASNNLSVHHSPHRTHLLS
GTSTTHRTSRNFRLLRGSPCSSCCSLSVVPPVMKVLKERRW back to topmRNA from alignment at Scaffold_350:1536..6119- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1809_6a-0001 ID=EsuBft1809_6a-0001|Name=EsuBft1809_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4584bp|location=Sequence derived from alignment at Scaffold_350:1536..6119- (Ectocarpus subulatus male Bft15b)
CGTGGTCGTGGACAAGCGTGTCAACGACAGAACCTTCATCTATCTCTAGG
AGCAAGCCACCGCCCACGGCTTCACTCCTTGAAACTTGGCGTCAGCTGGC
ATTACACGGTAAGCGGGTGCTGGACGCGGCTTCCACACTGCTGTGTGTTG
TTGCCACGCTTTTTTCACCACCACCGGGTTGCTTGTTATTTGGCCTCACC
ACCCACGAGAATCTAGACTAAGCCTCTTCTCTGCTTCCTCTCCTGTAGAG
ATGCTGGCTTGTGATGCTTTTGCGAAGCGCCCGCGGGACTGGGACCTTGC
AAAGGATACGCGCCTCGGAGGCCATCGCGATGTTTTGGGTGATTTCTCGT
ACGTTCGCCGTCCCTCGAAAGCTATTTTGTCTGCATCGGCGGTCCATGAA
GTGATTTCTGTGGCGGATACCCTCTGCATGGAGCGTCCTGAGTTGCTGGC
CTTGTGTAGTTGGACCCGAGATGACAGCATGCTTCCCACGTCTGCTGCCA
CCTCTACTGCATTATGCCGGCGTACCGGCCGATGTCCGCGAATTTTCCTG
TTGTGCTGTCCGATTTGACTCCGCTTGCATCGACTTGGAACGCGATGTGT
GCACACAAATTGGGTGTCAGCCGCCCCACCAGCCTTCCCTCCATTTTCCG
AAATCACATGGCACTTTTTTTCGGGGAATCGTTCACCCTCAAAGCATTTG
AATTGGAAAGCTTTCAACAGCGCAAACCCACAGCGGTCTTTGCTCGCACT
TCAGCACCAGCTGCGGAGGAACGCCGTGCTGCTCTGCGTGCTTTTGGTCG
GCAAATGTCGTGTCTCCATGCAACACGGGCCCTCTTGTGCTAGTTTTCTA
CTGCTGTTTGTGCGTGGCATGGTGTGCTTTTGGACGCTTTTTCTGCTTGG
TTGGATCCGCTTCAACCTCGTGTGCACCAAGCTTGTATCACTGGGCGTAT
GCTATCTTGTGGATATCTCCGCCTTTCGCTTGGACCTTGGCTTGCTCTTC
CCGAAATTGCACCCGGCTTCACTACTTCTGCTGCTCTTGGTACTGCTGCC
TCAACTGCGGTTGGTTATCCTACATCTACTGTTTCTGGCCCTGCTGCCCT
TTCCAAAATCGATCGTAGCTACCCTCTCTCTGGCCCTGTTCTTGTTAACA
AAGAGGACACCATGTCCAGCGGCAACGTGGAACTCCTGGGCGACAATGTG
GAAATCCTCGACTACGAACCCGAGGGCGAGGCTCCCACTGCAGAGTAGTT
TCCAGCGGCGAGTGCAGAAGACGAGAGCCCCCCCATGTCCATGGTGTTCA
CCGTCGATGATTTGCTGGACAACATCGCCACAGCAGATCCGGCGGAACTG
GAGCGGACCTACAACACCGGACGTGTCTCTCTGGAGGATATCGTAGAGCG
GCCCATCTGTCGTCCGATTCCCCCTTTTCGTTCCTCCTTTCTCGCTCCCG
CCGGAAGACAGATTAATCCGCTTGCCCCACGACGAGTTTATGGAGTACCA
ACGGTTGAACGAGATGTGGTGCGACGGTCTTGCCGGGAACATAGCAGAGG
CGGAGGCGCGAGAGCAGGCGAAGCGCGAGGACGCGGAGCGCTTGGCGGAA
CGGGAGGCTGCTCTGGCCGCTGCGGCGAGGAAGCAGGAGGAGGAGCGTGA
GGCTGTTCGGGCTGCTGCGGCGAGGAAGCAGGAGGAGGAGCGTGAGGCTG
CTCTGGCTGCTGCCGCGAGGAAGCAGGAGGAGAAGCGTGCGGCTGTTCTG
GCGGAGCGTGAGGCGTATCTCCAAGCGGCTCGGACGAAGCAGGGGGCGCT
CCGATCGCGGCTGAAGGAGCTGGAGCCCCGCCACCAGGACCCGCGAGCAG
CCCCCCACCCCCTTCGCCGTGTTATCGTCCCCGTCCCCACGCAATCCCAG
GTGCACCTTGGCTCCCATCGTACCGCCTCGCCGCACGAGAAGGAGCGCGA
GGTGGCGGCGTCTCCGACGAACGAACAGGAGCGGAAGAGGACAGCGACTC
CAGAGTTTTCGGTTACTTGGGTCTTCCGGCTGGTGCTGAAAACGGGGCAT
CGTTTGCGGCGGCAACCACGGTATACGAGTTCCACGTTGGAGATACAGCG
TTTCTGTCCCGCCCGCTGGAGATGCCTGCAGAAGGTGTCACCTTCCACGA
CGAGGATAAATTCGCAGCTCTTTTTGCATGGGCTGGCATCAAACAACTTG
TCCGTGCACCATTCCCCCCACCGCACACATTTGCTTTCGGGCACATCTAC
CACACACCGTACCTCGCGAAACTTCCGCCTTCTTCGCGGCAGTCCGTGTT
CCAGCTGTTGTTCGCTCTCCGTCGTGCCACCTGTCATGAAGGTCCTCAAG
GAACGTCGGTGGTGACCCAGGAGGGAGGACTCTAGCTGCCTCTTGCTCGT
GCTGCTCGATCAACGACTTCAAGCACGATCAACAAGCCCCCCGGCAGGCC
TTTTCACGCCCTGCACATGGTTCTGGAGAGGACAAGGATTTCAGTAGTTC
GGCGGCTCCGGTGTCCAAAGCTGGAAGAACCGTTGGGGCGACCGGGATTC
GACGGCCAAGAGCGGGACGGACGACCACCACCGCTTCACCCAGTCTTCGC
GAGGGCGCGGCGTCGGATATAACAGGCGAGGGCGAACCGTGGGAAACCAG
CCTACGAGGTCTTCGCCGGCGAGTCGCCATCGCCGGAGCAGGAGTCGGAG
CGCAGAGCGACAACAGCGCACCAATCCTTCGTCTAGGCGTGGGCGCAGCC
GGAGCGGAGACCGTCGTGGGAGAAACACGCCTCCGTCTAGGCGTAGCCGC
AGCCGGAGCCAGAACCAGAGCGGGGGCAATAGCAGGGCGACTAGCACTGA
CAGCAGTCGCGGTGGGAAAGGGCGACGGAGGTCAGGCCACGGTAACAGGC
AAGTGATGTATGATCGAGGTGATTTTCGTAGCTCTGGGTTGTTGGGGGAA
AGCAAGGATGCTTCAGAAGACGGTTCTCTCTGTTCTTCACCGCTTGCTCT
ACGCCCTCCCGCTGATGTAGGCCAACCGACCAGGTCTTCTTTGGCTTTCA
AACTTGCCAACATGCAACTTCGTGAACGTTCAGCCGCTGTGAAAAGCCAT
GCCCCTGCCCATGCCGTTATGGATCATCCCACATCTTCCTTGCCTTTGGA
CGAACCTGTTGAGTCACCACGCCATGCTGCATCACACGCCTCGACTTCGG
CCTCCCGTACTGAAATGCTGTTGGAACAAGTATTCACTCTCCTGCGAGCA
AATCAAGTAGTGGATGCTGCTGCCGACGCGAATGTACAACCTCCTGTGCC
CCCCCACGCTCCTAGCGTGCCACCACCTGCCCCATCTTCTTCCCCACCAA
CGCGTCCGACACCGATGCAAGACCACGCTTCGAGCTTTTCGGGAGCTCCT
GTGGGACGCGATGTTCGTGCCGAAACCGCTGCCAGGACCACGCCAGGATC
ATCGTCATCAGCCACGAGGTCGGCGACAGTACCGGTCGAGCCTGCGGTGG
CACAGTCAGCGTCGACAGCTCCAGCCCTGTAGCAACAGCCTTTGGTGGTA
TCGCCCCCCCCGCTCCAGCGTGCGTCTGTGTTGATTGATCCTGACTCTGC
AACCGGCCACATCGTCGAGCCACCGAGTCAAGCGGCATCACCGGTGCCAT
AGGACGATGCTAGGTTGCCTTTGTCTTCCTCGGGAGGCAGGAGGCTCTGC
ACGCTGCGGACGCCGCTGCAGCGGAGGCCGACACCATCCGCGTTCAAGAC
AAGATGGACAAGCTGAAGCCGGAACAACTTGGTAGTGTCACACGCTTGCC
CCTCGGTCCTGATCCTGAGGAATTTGCTCGCTTCGCGTCTAGCTGCAAGG
GTGTAGTCACAGAGATCCTCAACAAAAGCGACGTCAAGCGCAAGCAGACT
TTCAATTCCTCCACCTGGGTCACCGGATGGCTTCCGTTGTTGCGCAAACG
TGTCCGTGCTGCTGTCGTTGAAGGCCAAACCACCAATCGTGCCACTCTGG
ATTTTCTTGATGCCACCTTCCTACAGGTAGAAAACCATCTGCGCAAGGAA
CCGGCAGGGCCCTCGACGTACGCCTTCTTCATCCAGAAATTGGCGGCCGC
CTGGGACACTCAAGACAAGAGCTCGGGGATTGATCGTCTTCGCAGTTTTG
GCGTATCCAACGGCGAGACTTACGGAGAATACATCCGTCGCTTTAAGGCT
CTGGCCATGACCGTCATCGTTTCCCACCACGCGTTCAAGCCTTCGGATGC
GCAAGTGCAGATAGCTGTTCGAGACTCCATGTTGAAGCAGTTTCCGGTAG
TGTCTGGGCAGGTGTACAAGGATGAGCAGCTCTCCATGGAAGCCCCTTTT
GGGCGACATGCTTCGTGTCTGGATGATATGTGGGATGTGTTGGACAAGCG
TGCGTTCGCGCACACGCCGGCGGTGCATGGAGATGATTTCTTTTCGGTAT
CTTCCACGAATGCTAGGAGTTCGTCTGCTGTTTCGCGTGCTGTAGCTTCT
TCGGCGTTGCGTTCGACGGTGACCCCTTCGTGGAGCCAAGGTTCTTCGGC
CGCCGTGATGAGTGTTGACCCTCTACCTAATCAT back to topCoding sequence (CDS) from alignment at Scaffold_350:1536..6119- >EsuBft1809_6a-0001 ID=EsuBft1809_6a-0001|Name=EsuBft1809_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=876bp|location=Sequence derived from alignment at Scaffold_350:1536..6119- (Ectocarpus subulatus male Bft15b)
ATGGAGTACCAACGGTTGAACGAGATGTGGTGCGACGGTCTTGCCGGGAA
CATAGCAGAGGCGGAGGCGCGAGAGCAGGCGAAGCGCGAGGACGCGGAGC
GCTTGGCGGAACGGGAGGCTGCTCTGGCCGCTGCGGCGAGGAAGCAGGAG
GAGGAGCGTGAGGCTGTTCGGGCTGCTGCGGCGAGGAAGCAGGAGGAGGA
GCGTGAGGCTGCTCTGGCTGCTGCCGCGAGGAAGCAGGAGGAGAAGCGTG
CGGCTGTTCTGGCGGAGCGTGAGGCGTATCTCCAAGCGGCTCGGACGAAG
CAGGGGGCGCTCCGATCGCGGCTGAAGGAGCTGGAGCCCCGCCACCAGGA
CCCGCGAGCAGCCCCCCACCCCCTTCGCCGTGTTATCGTCCCCGTCCCCA
CGCAATCCCAGGTGCACCTTGGCTCCCATCGTACCGCCTCGCCGCACGAG
AAGGAGCGCGAGGTGGCGGCGTCTCCGACGAACGAACAGGAGCGGAAGAG
GACAGCGACTCCAGAGTTTTCGGTTACTTGGGTCTTCCGGCTGGTGCTGA
AAACGGGGCATCGTTTGCGGCGGCAACCACGGTATACGAGTTCCACGTTG
GAGATACAGCGTTTCTGTCCCGCCCGCTGGAGATGCCTGCAGAAGGTGTC
ACCTTCCACGACGAGGATAAATTCGCAGCTCTTTTTGCATGGGCTGGCAT
CAAACAACTTGTCCGTGCACCATTCCCCCCACCGCACACATTTGCTTTCG
GGCACATCTACCACACACCGTACCTCGCGAAACTTCCGCCTTCTTCGCGG
CAGTCCGTGTTCCAGCTGTTGTTCGCTCTCCGTCGTGCCACCTGTCATGA
AGGTCCTCAAGGAACGTCGGTGGTGA back to top
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