Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1799_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 162 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1799_7a-0001 ID=EsuBft1799_7a-0001|Name=EsuBft1799_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1624bp|location=Sequence derived from alignment at Scaffold_550:106921..108853+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCCCAAACCGCTTCCCGAGGCAACTCCACTACCATGGCTGAGCGCCGGAA
GCGCCAGCATCCCCAGGGGCCCGCAGCGCAACGTCGGGAGAAACGCCGTC
GAGGAGCTATCGACGAGGAACGGGAGCCCATCTACGAGCCCAAGCGGCTT
CCGTGGGCCCAACACGACGAGGCGGACCTCGATAAACGGCAAGGCTGGCG
GCGGTCGTACTGCATGGAGAAGTCCAGCTTCCGCAAGCTTGTCGAGCTAC
TCCGCCCTTCGCTGGCAGTCAACGCCTTCTTCGGCGCACTTATTCTACAG
CAGTAGGGACAGCAGTGTCTGCATATGCATACAGCAGGAGTCGTTGTATG
GGAACGACAGGAAGATACTACTATGGTGGCGCTGAAATAAGTTCAGCAGT
ATAAATAGAGCGTGCAACACGCCGGCACCACTACACGTTATACATGCCTC
GTCGGGAGCCAACACAGGTTGTCGTATCCCTCAATGATAGCATACAAGAG
TCGACACGTGCTCCTTAAATGCATATGCGAGGTTAGTTGTGTGTTCCGTG
AAGAACACAGAGCCGTCTCACAGCCCTAGTCGGGAAGTGTATTGGGCCGG
TACTCTGGCGAGTTTGACGATGACATACGTCCTTTGACGCTGGCGATTGC
AAACACACCCCCTATGACACTGGTACATATTTCCTGGACGACACACGCTC
GCTCATCCTTCGAACATTATCTGCGCGTCGCTCCGAAACCCCACAGCACT
GCGATCGCCAATCAACGGCACCATAGCTGTAGAAGTCCGCGTTGCCGTGG
CGTTGAGGATCCTGGCTGGCGCTAGTTACTGGCATGTTGCCCCCATGTTT
GGCTTGTCGGTGATCGACGCCATCAACAAGACGCCTGCGGTTGGTGCATT
CGACTTCCCCCTGACCGAGGAAGGCTGCACGCGAAATGCCAACAGATTCA
AGGTGAGGCCTAACGGTGGTCATTACTGCTGCTGTGGGTTGATCTTGGCG
GCATTCTCTTGACCAGCCGCGGGATGTCGTTTTTTTTTAATTACGTCTGG
CGTTTCCAGCCGTTTTAGTGTAGGGAGGCCTATATACAGCCTTCGACGGT
AACGCAGGAAAAAAAATGTCGTTCCCGGCGGATACAAGTTCGGATTGGTC
AGCATGCCTTTAATCGAAAAACAACCCCCGGGTCCCGGGTGGTTCGCCAG
CTGTTGGTCTTTGTACAAATGGCCTTTTCACAAATAAATGTTTTTTTTTG
TGTCATCATTAGTGTATGCTGGCCGTGTTGGTTCCGCCCCGCAACAGTGG
CCCGGCAACTGCTTGTAGTCAACCACGTGACTCTGAGATACCCTGGTACA
TTTTTACCGCTGAACCTGACGCAATATTAGGATTAGCAAACACGGTATGT
GCACCGTTGCTGATGATGGCGCCGTCGCACACGACATCAACCCACACAAC
GTACAGCCGAACGCAATTTACCGAAGTTCGTCAACGTCCATCTCTCGACC
ATTTTTTTTCCCCTTCCTGGCACTGCTACTTTCCCGCCCTCGTGTCTGCC
GTCTACAAATGCAGGAGAAGGGCACCGATGGCATTTTCTCCTGGGTCGTC
ACCGCCGTGGATGGTCTGTTCATC back to topprotein sequence of EsuBft1799_7a-0001 >EsuBft1799_7 ID=EsuBft1799_7|Name=EsuBft1799_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=90bp
MAERRKRQHPQGPAAQRREKRRRGAIDEEREPIYEPKRLPWAQHDEADLD
KRQGWRRSYCMEKSSFRKLVELLRPSLAVNAFFGALILQQ back to topmRNA from alignment at Scaffold_550:106921..108853+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1799_7a-0001 ID=EsuBft1799_7a-0001|Name=EsuBft1799_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1933bp|location=Sequence derived from alignment at Scaffold_550:106921..108853+ (Ectocarpus subulatus male Bft15b)
CCCCAAACCGCTTCCCGAGGCAACTCCACTACCATGGCTGAGCGCCGGAA
GCGCCAGCATCCCCAGGGGCCCGCAGCGCAACGTCGGGAGAAACGCCGTC
GAGGAGCTATCGACGAGGTCGGTGCAGCCCAGGAACACAGGAGATCTCTC
ACAGTCCTGGGTCTTCTGTAGTGGCGGCGGGCGTGGTGGCAGCAGGAGAA
GCTCATCGTGCCCACTGCCCTCAGGAACGGGAGCCCATCTACGAGCCCAA
GCGGCTTCCGTGGGCCCAACACGACGAGGCGGACCTCGATAAACGGCAAG
GCTGGCGGCGGTCGTACTGCATGGAGAAGTCCAGCTTCCGCAAGCTTGTC
GAGCTACTCCGCCCTTCGCTGGCAGTCAACGCCTTCTTCGGCGGTGAGTG
TTGATATGTACATGCAGCCGCCCACGGCAGGTATGCGTAAGGCTTCCTCC
CATGTATACGTAGAGAACAACGGGGAAGAGCAAGTCTAAAACCCAGGGGA
AACACTACTGCTGTAGACTGCCTTGCTGTTTGTCTGCTTCTTCAAAAAAA
AACTCTCTTCGAAACATGCAGCCAGGGTATGCATACACGCAGCAGCACTT
ATTCTACAGCAGTAGGGACAGCAGTGTCTGCATATGCATACAGCAGGAGT
CGTTGTATGGGAACGACAGGAAGATACTACTATGGTGGCGCTGAAATAAG
TTCAGCAGTATAAATAGAGCGTGCAACACGCCGGCACCACTACACGTTAT
ACATGCCTCGTCGGGAGCCAACACAGGTTGTCGTATCCCTCAATGATAGC
ATACAAGAGTCGACACGTGCTCCTTAAATGCATATGCGAGGTTAGTTGTG
TGTTCCGTGAAGAACACAGAGCCGTCTCACAGCCCTAGTCGGGAAGTGTA
TTGGGCCGGTACTCTGGCGAGTTTGACGATGACATACGTCCTTTGACGCT
GGCGATTGCAAACACACCCCCTATGACACTGGTACATATTTCCTGGACGA
CACACGCTCGCTCATCCTTCGAACATTATCTGCGCGTCGCTCCGAAACCC
CACAGCACTGCGATCGCCAATCAACGGCACCATAGCTGTAGAAGTCCGCG
TTGCCGTGGCGTTGAGGATCCTGGCTGGCGCTAGTTACTGGCATGTTGCC
CCCATGTTTGGCTTGTCGGTGATCGACGCCATCAACAAGACGCCTGCGGT
TGGTGCATTCGACTTCCCCCTGACCGAGGAAGGCTGCACGCGAAATGCCA
ACAGATTCAAGGTGAGGCCTAACGGTGGTCATTACTGCTGCTGTGGGTTG
ATCTTGGCGGCATTCTCTTGACCAGCCGCGGGATGTCGTTTTTTTTTAAT
TACGTCTGGCGTTTCCAGCCGTTTTAGTGTAGGGAGGCCTATATACAGCC
TTCGACGGTAACGCAGGAAAAAAAATGTCGTTCCCGGCGGATACAAGTTC
GGATTGGTCAGCATGCCTTTAATCGAAAAACAACCCCCGGGTCCCGGGTG
GTTCGCCAGCTGTTGGTCTTTGTACAAATGGCCTTTTCACAAATAAATGT
TTTTTTTTGTGTCATCATTAGTGTATGCTGGCCGTGTTGGTTCCGCCCCG
CAACAGTGGCCCGGCAACTGCTTGTAGTCAACCACGTGACTCTGAGATAC
CCTGGTACATTTTTACCGCTGAACCTGACGCAATATTAGGATTAGCAAAC
ACGGTATGTGCACCGTTGCTGATGATGGCGCCGTCGCACACGACATCAAC
CCACACAACGTACAGCCGAACGCAATTTACCGAAGTTCGTCAACGTCCAT
CTCTCGACCATTTTTTTTCCCCTTCCTGGCACTGCTACTTTCCCGCCCTC
GTGTCTGCCGTCTACAAATGCAGGAGAAGGGCACCGATGGCATTTTCTCC
TGGGTCGTCACCGCCGTGGATGGTCTGTTCATC back to topCoding sequence (CDS) from alignment at Scaffold_550:106921..108853+ >EsuBft1799_7a-0001 ID=EsuBft1799_7a-0001|Name=EsuBft1799_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=273bp|location=Sequence derived from alignment at Scaffold_550:106921..108853+ (Ectocarpus subulatus male Bft15b)
ATGGCTGAGCGCCGGAAGCGCCAGCATCCCCAGGGGCCCGCAGCGCAACG
TCGGGAGAAACGCCGTCGAGGAGCTATCGACGAGGAACGGGAGCCCATCT
ACGAGCCCAAGCGGCTTCCGTGGGCCCAACACGACGAGGCGGACCTCGAT
AAACGGCAAGGCTGGCGGCGGTCGTACTGCATGGAGAAGTCCAGCTTCCG
CAAGCTTGTCGAGCTACTCCGCCCTTCGCTGGCAGTCAACGCCTTCTTCG
GCGCACTTATTCTACAGCAGTAG back to top
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