Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LN28 |
| ProteomeId | EsuBft1631_7 |
| Protein domains | PTHR19303 |
| Protein domains | IPR009057 |
| Protein domains | IPR007889 |
| Protein domains | IPR004875 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 261 |
| Evalue | 7.82e-90 |
| EggNOG OGs | 2CZS4@1|root,2SBGG@2759|Eukaryota |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
| Description | DDE superfamily endonuclease |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003677 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1631_7a-0001 ID=EsuBft1631_7a-0001|Name=EsuBft1631_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2610bp|location=Sequence derived from alignment at Scaffold_265:4138..7520- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TTGCTCCGCGCAACCGGAGCTCTCGTTTGAGCACCACAGCGTCGCACGCC
AAGCATTCTACCCCGAGATACAACCGAGGGAGCCACCACAGCTCCCGCTG
CTAGCCACCTTCATCGTTTTCTTGGGATTTTTGCTAAGCATGACCCGGCG
CAAGGTGGACGAGGAGCAGGTTCGGAAGGCCTGTGCAGCGATAGATGATG
GCATGTCGGTTAGGAAGGCTGCTGAGGTCTTTGGGGTAGGTCGTACGTCC
ATCGTAGACCGCCGCCGTGGCAAGGCGGCCATGAACGCGAAGGTTGGTCC
CGAGACCATCCTGAGCAAAGAAGAGGAGGATTCGCTGGAATATATTCTGC
TGTTTGCTGCTCGCAACTTCTTGGCTGTGGATCGGGTTTACCTCAGAGAT
GCGGTGCGACGACTCTGCAACGACGGTCGGCGGATCCCTTGGGATCCAGA
GAAGGGTCCGGGGAAAGATTGGCTTGCGGGCTTCCTTCGTAGGCACCTAC
GGGTGGCGGAGCGCTCGACCCGCATCTTCGAGGCAAACATGATCACCGAG
GACGAGGAGCCTCGTATGGTGCAGTTCTACGAGAGATGGGCAGCTCTCCT
CGACGAGGTCAAACCGGAGGCCAACCACGTGCACAATACGGACGAGACAG
AGCCACCGCGTNGACATCGGAGAAAGGGCCCTGAGGCTGCTGAGGGGGCA
AGGGCACACCGTCACGGGAATCCGAGTAGGCACGGTGNGGACTGCAAGGT
GGTTGGTTCGATGCGCTCCAACTCGCGAGAGAACACCACCGTGGTCGCTA
CCATCAGCGCTGATGGTCACACCTGGGCACCAACCATTATCTTCAAGGGG
CAACGACTTCAGGCCGATTGGTTTGTAGAGCGAAACGGCCTAGAAGGTGC
GAAGTACACCTGTACGGATTATTCGTTCATGCAGGGAGACCTATTCATCG
CCTACTTGAAGGATTTCCACAAGCAGCTCTGCGACCGAGGGTTGCTCGAC
GGAAAACCCCACATACTCTTGCTCGATGGACATGCATCACACGTGAGCGT
GGAGGTAATCAAGCTGGCCATGAATCTCAAAATCATCTTGTTCCAGCTAC
CCTCCCACACGTCGCACATCACCCAGCCCTTGGATGTCGTCGCCTTCGGA
AGCTTTAAGAAATCGGTGACCAGAGTTTTGGCGTCCTTCTACCGCAACTC
CGGCGGCTTGTTGCCGCTGAAACGCGACATGCCCGGCGTGATCGCGGATG
CCTGGAAATTGAGCTTTACACCGGAGATAAATAAATCATCATTCGCTGGG
GCGGGCTTGTGGCCTGTGAACAAGGAGCGGGCGCTGGGCCGGCTGAAGGG
CACAGCGACGAAGAAAGAGCGGCGAGACGAGCGCCCACCCCTACAGGATG
TCCCCATCGCCGCCCTCAACGAGCAGCTGGAAAAGACATCGGAGAAAGGG
CCCTGAGGCTGCTGAGGGGGCAAGGGCACACCGTCACGGGAATCCGAGTA
GGCACGGTGTTACTCGGTGGCCTCTTGACTCAAAGGAAGCGCGCGAAGAA
GATGGAGACCTCGCGGGGCTCGCTTGGCCTTCCCGACGGAGGTAACATTA
CCGCGCCTGAGTTCCTGGACGCTGTTGCCGAAAAAGAACGCGAGCGGGGG
GAGGGAGGCGGGGGCCGCGGTATTGGTCGTGGAGACGGGGTGGGAGCGCG
TGGCCGGGGGGGCGGCGCGGCCGGGTGGGGGGGCGCGGCCGGGTGGCTGG
AGCAGAAGGGACGACTTTGTCGGAACGCCAACCAGCGCCCTCCGTGTCCA
GGGTCGGACGACAACGGACGCCGACACCCGTTGTCGAGGTGTAGCCGTAT
GGATATTTCTCACTTGTCCTGACAGGTTCAGATTTGAATCGAACACGCCC
AAATGGTCATGAAGTTGTACCCGCAGTCGATATGCACCCTGTAGAACGTC
GCATGTGGTTCGTAGGCTATGCGACGGTGATTTTAGGGCGTGCCAGCACC
GGGGGGGCAGGATGCACAGGTTTTGAACCCAACCCGAGAATGTCATCGTT
TTGTCCCCGGGTGACCTGTGTGTGTGTGTGTGCGTGTGTGTTCGTTTGCG
TAGATGTTTTTCACATGCTTACAGGTTCCCTCAAATGCGCTGGTCGCGGG
GGTGCAAAGGTGTTTTGAAACTACAGTTTTCGGCGTTAATTCTTACCGTG
GCGGCAAGCCTAAAATCAGGGGAAAAGTATCCTTATTTGACCTTAAATAT
ATCATCAGGTGTGCTCCAATGGTCGTGGAATTGTGCGTGCAGTCGAAACA
TACCCTGTAGAACGTCGTGTGGTTCGTACCCTGTTTGATGGTGACGTTCG
TGCGTTCCAGTACCGGGGGGGGAAGGGATGCACGGGTTTAGACTGAAAAC
CCGGGGACGCGGTGGTCCTTTCCCCGGGGTGGCTTTTTTTTTTTGTTCTG
AACATGTTTCTCACTCGTGTTTAAAGATCCCCTCCAAAGAATGTGTCGTG
GGGATGAATGAGTATTCCTCAATGGTGGATACAGTTTGGCGGTGTTTGGC
GTGAATTCTTACCGTTAGCGGCATGCTAAATCAGGAAAAAGTACCCATAT
TTGACCAAGC back to topprotein sequence of EsuBft1631_7a-0001 >EsuBft1631_7 ID=EsuBft1631_7|Name=EsuBft1631_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=438bp
MTRRKVDEEQVRKACAAIDDGMSVRKAAEVFGVGRTSIVDRRRGKAAMNA
KVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIP
WDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERW
AALLDEVKPEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGX
DCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNG
LEGAKYTCTDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHAS
HVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASF
YRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALG
RLKGTATKKERRDERPPLQDVPIAALNEQLEKTSEKGP back to topmRNA from alignment at Scaffold_265:4138..7520- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1631_7a-0001 ID=EsuBft1631_7a-0001|Name=EsuBft1631_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3383bp|location=Sequence derived from alignment at Scaffold_265:4138..7520- (Ectocarpus subulatus male Bft15b)
TTGCTCCGCGCAACCGGAGCTCTCGTTTGAGCACCACAGCGTCGCACGCC
AAGCATTCTACCCCGAGATACAACCGAGGGAGCCACCACAGCTCCCGCTG
CTAGCCACCTTCATCGTTTTCTTGGGATTTTTGCTAAGCATGACCCGGCG
CAAGGTGGACGAGGAGCAGGTTCGGAAGGCCTGTGCAGCGATAGATGATG
GCATGTCGGTTAGGAAGGCTGCTGAGGTCTTTGGGGTAGGTCGTACGTCC
ATCGTAGACCGCCGCCGTGGCAAGGCGGCCATGAACGCGAAGGTTGGTCC
CGAGACCATCCTGAGCAAAGAAGAGGAGGATTCGCTGGAATATATTCTGC
TGTTTGCTGCTCGCAACTTCTTGGCTGTGGATCGGGTTTACCTCAGAGAT
GCGGTGCGACGACTCTGCAACGACGGTCGGCGGATCCCTTGGGATCCAGA
GAAGGGTCCGGGGAAAGATTGGCTTGCGGGCTTCCTTCGTAGGCACCTAC
GGGTGGCGGAGCGCTCGACCCGCATCTTCGAGGCAAACATGATCACCGAG
GACGAGGAGCCTCGTATGGTGCAGTTCTACGAGAGATGGGCAGCTCTCCT
CGACGAGGTCAAACCGGAGGCCAACCACGTGCACAATACGGACGAGACAG
GTGAAGATTCGCTCCTAGACCTGTCTATAACAGTGCAGACTAGCCTACAG
CAGTAGTAGACGTGTGGCAGCAGTCGAAACTGCGCGGGTGACTGCTGTGC
ATAGACCGAAACATGTCACACCGAAATATCAGGCAGAGTTCTGCCCCCTT
GCGGCGTAATTTTGGCCTCCTCATGTACGGCAGCAGTGTAGGCCGTGCTC
CCGCATTCCTGCCCAAAAATGGCGAAATTGCCGCTGGCTCTGGTCTAACG
TAGGCTACAGCAGTAGTTTCAGACACAAGAGTAGAGTACAGCACTGGTTC
CAGACAATATACTGCTGTAGACTATGGTAGTCTAGAATTCAATATTTTCA
TTGCTGCATCGCATCGTCTTCAGCTGGTAGTTCACCTGCGGCGACGAACG
TGTACCTAAGGCGATTTTTAGTAGATGCATTTGCAAACACATGAAAAAAC
TGAACTAGACTAGACTAGTCTACACAGCACCCTGCTTTTGCTCTCCCGGT
TGCCTCGTCCAGCTACCGCCAAAATGACGGTGGACTGCGTAGGTTGAAAG
CCCTCGCCGCACGAAAATAAATGTAAAAGAGCCACCGCGTNGACATCGGA
GAAAGGGCCCTGAGGCTGCTGAGGGGGCAAGGGCACACCGTCACGGGAAT
CCGAGTAGGCACGGTGNGGACTGCGTAGGTTGAAAGCCCTCGCCGCACGA
AAATAAATGTAAAAGAGCCCCCGCGTGTCCCCCCCCCCGTCCACCCCCGT
TGCTTGGGGCGCACGATATTGACTATAAATGTTTGTGTGCATGCGTATAC
TACTGCTGGTAATTTTAACTATCCATTAGACTAGCCTAACGCCCCCCCCC
CCCCCCCCCCCCCCNCAGAAGGTGGTTGGTTCGATGCGCTCCAACTCGCG
AGAGAACACCACCGTGGTCGCTACCATCAGCGCTGATGGTCACACCTGGG
CACCAACCATTATCTTCAAGGGGCAACGACTTCAGGCCGATTGGTTTGTA
GAGCGAAACGGCCTAGAAGGTGCGAAGTACACCTGTACGGATTATTCGTT
CATGCAGGGAGACCTATTCATCGCCTACTTGAAGGATTTCCACAAGCAGC
TCTGCGACCGAGGGTTGCTCGACGGAAAACCCCACATACTCTTGCTCGAT
GGACATGCATCACACGTGAGCGTGGAGGTAATCAAGCTGGCCATGAATCT
CAAAATCATCTTGTTCCAGCTACCCTCCCACACGTCGCACATCACCCAGC
CCTTGGATGTCGTCGCCTTCGGAAGCTTTAAGAAATCGGTGACCAGAGTT
TTGGCGTCCTTCTACCGCAACTCCGGCGGCTTGTTGCCGCTGAAACGCGA
CATGCCCGGCGTGATCGCGGATGCCTGGAAATTGAGCTTTACACCGGAGA
TAAATAAATCATCATTCGCTGGGGCGGGCTTGTGGCCTGTGAACAAGGAG
CGGGCGCTGGGCCGGCTGAAGGGCACAGCGACGAAGAAAGAGCGGCGAGA
CGAGCGCCCACCCCTACAGGATGTCCCCATCGCCGCCCTCAACGAGCAGC
TGGAAAAGACATCGGAGAAAGGGCCCTGAGGCTGCTGAGGGGGCAAGGGC
ACACCGTCACGGGAATCCGAGTAGGCACGGTGTTACTCGGTGGCCTCTTG
ACTCAAAGGAAGCGCGCGAAGAAGATGGAGACCTCGCGGGGCTCGCTTGG
CCTTCCCGACGGAGGTAACATTACCGCGCCTGAGTTCCTGGACGCTGTTG
CCGAAAAAGAACGCGAGCGGGGGGAGGGAGGCGGGGGCCGCGGTATTGGT
CGTGGAGACGGGGTGGGAGCGCGTGGCCGGGGGGGCGGCGCGGCCGGGTG
GGGGGGCGCGGCCGGGTGGCTGGAGCAGAAGGGACGACTTTGTCGGAACG
CCAACCAGCGCCCTCCGTGTCCAGGGTCGGACGACAACGGACGCCGACAC
CCGTTGTCGAGGTGTAGCCGTATGGATATTTCTCACTTGTCCTGACAGGT
TCAGATTTGAATCGAACACGCCCAAATGGTCATGAAGTTGTACCCGCAGT
CGATATGCACCCTGTAGAACGTCGCATGTGGTTCGTAGGCTATGCGACGG
TGATTTTAGGGCGTGCCAGCACCGGGGGGGCAGGATGCACAGGTTTTGAA
CCCAACCCGAGAATGTCATCGTTTTGTCCCCGGGTGACCTGTGTGTGTGT
GTGTGCGTGTGTGTTCGTTTGCGTAGATGTTTTTCACATGCTTACAGGTT
CCCTCAAATGCGCTGGTCGCGGGGGTGCAAAGGTGTTTTGAAACTACAGT
TTTCGGCGTTAATTCTTACCGTGGCGGCAAGCCTAAAATCAGGGGAAAAG
TATCCTTATTTGACCTTAAATATATCATCAGGTGTGCTCCAATGGTCGTG
GAATTGTGCGTGCAGTCGAAACATACCCTGTAGAACGTCGTGTGGTTCGT
ACCCTGTTTGATGGTGACGTTCGTGCGTTCCAGTACCGGGGGGGGAAGGG
ATGCACGGGTTTAGACTGAAAACCCGGGGACGCGGTGGTCCTTTCCCCGG
GGTGGCTTTTTTTTTTTGTTCTGAACATGTTTCTCACTCGTGTTTAAAGA
TCCCCTCCAAAGAATGTGTCGTGGGGATGAATGAGTATTCCTCAATGGTG
GATACAGTTTGGCGGTGTTTGGCGTGAATTCTTACCGTTAGCGGCATGCT
AAATCAGGAAAAAGTACCCATATTTGACCAAGC back to topCoding sequence (CDS) from alignment at Scaffold_265:4138..7520- >EsuBft1631_7a-0001 ID=EsuBft1631_7a-0001|Name=EsuBft1631_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1317bp|location=Sequence derived from alignment at Scaffold_265:4138..7520- (Ectocarpus subulatus male Bft15b)
ATGACCCGGCGCAAGGTGGACGAGGAGCAGGTTCGGAAGGCCTGTGCAGC
GATAGATGATGGCATGTCGGTTAGGAAGGCTGCTGAGGTCTTTGGGGTAG
GTCGTACGTCCATCGTAGACCGCCGCCGTGGCAAGGCGGCCATGAACGCG
AAGGTTGGTCCCGAGACCATCCTGAGCAAAGAAGAGGAGGATTCGCTGGA
ATATATTCTGCTGTTTGCTGCTCGCAACTTCTTGGCTGTGGATCGGGTTT
ACCTCAGAGATGCGGTGCGACGACTCTGCAACGACGGTCGGCGGATCCCT
TGGGATCCAGAGAAGGGTCCGGGGAAAGATTGGCTTGCGGGCTTCCTTCG
TAGGCACCTACGGGTGGCGGAGCGCTCGACCCGCATCTTCGAGGCAAACA
TGATCACCGAGGACGAGGAGCCTCGTATGGTGCAGTTCTACGAGAGATGG
GCAGCTCTCCTCGACGAGGTCAAACCGGAGGCCAACCACGTGCACAATAC
GGACGAGACAGAGCCACCGCGTNGACATCGGAGAAAGGGCCCTGAGGCTG
CTGAGGGGGCAAGGGCACACCGTCACGGGAATCCGAGTAGGCACGGTGNG
GACTGCAAGGTGGTTGGTTCGATGCGCTCCAACTCGCGAGAGAACACCAC
CGTGGTCGCTACCATCAGCGCTGATGGTCACACCTGGGCACCAACCATTA
TCTTCAAGGGGCAACGACTTCAGGCCGATTGGTTTGTAGAGCGAAACGGC
CTAGAAGGTGCGAAGTACACCTGTACGGATTATTCGTTCATGCAGGGAGA
CCTATTCATCGCCTACTTGAAGGATTTCCACAAGCAGCTCTGCGACCGAG
GGTTGCTCGACGGAAAACCCCACATACTCTTGCTCGATGGACATGCATCA
CACGTGAGCGTGGAGGTAATCAAGCTGGCCATGAATCTCAAAATCATCTT
GTTCCAGCTACCCTCCCACACGTCGCACATCACCCAGCCCTTGGATGTCG
TCGCCTTCGGAAGCTTTAAGAAATCGGTGACCAGAGTTTTGGCGTCCTTC
TACCGCAACTCCGGCGGCTTGTTGCCGCTGAAACGCGACATGCCCGGCGT
GATCGCGGATGCCTGGAAATTGAGCTTTACACCGGAGATAAATAAATCAT
CATTCGCTGGGGCGGGCTTGTGGCCTGTGAACAAGGAGCGGGCGCTGGGC
CGGCTGAAGGGCACAGCGACGAAGAAAGAGCGGCGAGACGAGCGCCCACC
CCTACAGGATGTCCCCATCGCCGCCCTCAACGAGCAGCTGGAAAAGACAT
CGGAGAAAGGGCCCTGA back to top
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