Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft151_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 157 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft151_7a-0001 ID=EsuBft151_7a-0001|Name=EsuBft151_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1574bp|location=Sequence derived from alignment at Scaffold_392:165401..167170- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATCACTTCAACTTCCTGCCGCCCAACGCCTCTTCTCTTCCCGGGCGG
CACCGCGGGCGTTAACAACGGAGCGCGGCGCGGGGCTACTGGTGGTCTGA
GAAGGATGTGCGCGACAATCAAGCTCGTTGAAATGATAAGGGCTGGGATG
GTGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTCTGAGTTTTTGTTTGCTC
CCGGCCGGCTTTCGGGCCAGGATTCGATAGATCGGGTGTTCGACAGCAGT
ACCTGGTAGTTACTTGCCCTCCGGCCAGGTGGAATCTGTTGGGTTGTATG
ATGTTTCCAAGCACCACTCACTTCGTCTCGCACGGTTGTCTTTCCGTCTT
TTCTGGTTTAGCACAGCTTAAGCAGCGCTGGTGTCGACATTTCTGGGTCC
TGATTTTGTTTCGTTACTTCTCTTTGATTTTTCACAACCACGTGTCTGCG
TGCCCGTCTTCGGTTAGCCTATGCATGACCACCATCGGGAAGGCGTCCGC
GTCAGTAATAAAAAATAGGAGGCACTTCTAAAGCAAGCAGCAATCGGCGA
TTTTTTATTTGTTGTGAAAGAGAGCAGCCGAGTGCGCGTCGGGCGACCCG
ACGCAGCATGAGTGAAAACAATTGCATCGACGTTATGCCAGGTGCTGCTG
TGGGAGCGTCGCGTTTTCGCATCCCCGTTGCTCACCTCGGTAGGAGCACC
CCCACCAACAGCAGCAACCGCATCAGCACCAGAGCCGCCTGCTGGCCTTC
CGTTCGCCCGCTTCCCTCCTCCCCCTCCTCCTCCTCCTCTTCCTCCGCCC
CCCCTGCCGCCGCCTGCGGCACCAGGTCTTGACGGACTAGAAACGTTTCC
GTTTCCGTTCGCATTGGAAGCGATTCTTTTTCCGATCGGGCTCAGGCTCA
GGTCTGGGGCCGTTCTGGGGCGCTGCCGTCTGGTGGCACCCCTGCTTCCT
TCTCGGGCAGGCATCTCCACGAGCTGATCTCCACAGCACTCGCTGAGATA
GTTTGTAATCCACCCGCGCGCGCGGCCCGCGTTCCTCGTTTAAAAAAAAC
TCCGGCTATACAGCCCGCAGAAGGAGTTGCTCTTGTCTGACTCCCGCACA
CGAAACGGAGACTGCTGTCCTTTACAACGCGGGTGCGACGCCCCGGTGGT
GGTGGGTGCTATCGCTCGTCGTGACCCCCTCCCCCCGAACGAAACGGAGC
AGGGGAAATTGTTTTGTTCCGAGAAAAGAGACGCTCTCGGCTATGTGCCT
CTTGTTATTTTAGTTGGTGAGGACGGCAAGTGTTTTTTTGCCTGCGCTCC
CCCTGTGCTCAGCGACAGCCCACGCAAGCAAGTCACCACCAGGAATGGCA
AATCAGCTCAGCAGCCCTCAGCTTAGAGAGAACGGTATGACTCCATGGTC
ATCTTCGTGTAAACACGAACAGACCAACAGAACCCGGTGTCTTCTTGACG
TTGCCCCAACACCTGGTGCCCGCTGCTGCTGCTTCCGCTGGGTCCAGAAA
GAAGTTGTCGATAATTTTTTTCAGACGGAGAAATGGAACACAACCCCCCC
TCTTTGCTCCGTCGCAGCTTTCTC back to topprotein sequence of EsuBft151_7a-0001 >EsuBft151_7 ID=EsuBft151_7|Name=EsuBft151_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=61bp
MITSTSCRPTPLLFPGGTAGVNNGARRGATGGLRRMCATIKLVEMIRAGM
VAAAAAAVVVV back to topmRNA from alignment at Scaffold_392:165401..167170- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft151_7a-0001 ID=EsuBft151_7a-0001|Name=EsuBft151_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1770bp|location=Sequence derived from alignment at Scaffold_392:165401..167170- (Ectocarpus subulatus male Bft15b)
ATGATCACTTCAACTTCCTGCCGCCCAACGCCTCTTCTCTTCCCGGGCGG
CACCGCGGGCGTTAACAACGGAGCGCGGCGCGGGGCTACTGGTGGTCTGA
GAAGGATGTGCGCGACAATCAAGCTCGTTGAAATGATAAGGGCTGGGATG
GTGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTCTGAGTTTTTGTTTGCTC
CCGGCCGGCTTTCGGGCCAGGATTCGATAGATCGGGTGTTCGACAGCAGT
ACCTGGTAGTTACTTGCCCTCCGGCCAGGTTCGTGGTCGGGCGGTCGAAC
GTAGTGTAGTGGTGTACCCCAAGTCAAACAAACACCACAACCTTCTGTGG
GACACACGCATATGGGCACGACACTACTGCTGCTGCTGTACGGGGGGGAA
TAGGCAGCGGACATGCAGCATCGCGGTTGCCTACAACGTGTGCATGTCTC
GGGAGTTTTAGCAAAAAACAACAGGTGGAATCTGTTGGGTTGTATGATGT
TTCCAAGCACCACTCACTTCGTCTCGCACGGTTGTCTTTCCGTCTTTTCT
GGTTTAGCACAGCTTAAGCAGCGCTGGTGTCGACATTTCTGGGTCCTGAT
TTTGTTTCGTTACTTCTCTTTGATTTTTCACAACCACGTGTCTGCGTGCC
CGTCTTCGGTTAGCCTATGCATGACCACCATCGGGAAGGCGTCCGCGTCA
GTAATAAAAAATAGGAGGCACTTCTAAAGCAAGCAGCAATCGGCGATTTT
TTATTTGTTGTGAAAGAGAGCAGCCGAGTGCGCGTCGGGCGACCCGACGC
AGCATGAGTGAAAACAATTGCATCGACGTTATGCCAGGTGCTGCTGTGGG
AGCGTCGCGTTTTCGCATCCCCGTTGCTCACCTCGGTAGGAGCACCCCCA
CCAACAGCAGCAACCGCATCAGCACCAGAGCCGCCTGCTGGCCTTCCGTT
CGCCCGCTTCCCTCCTCCCCCTCCTCCTCCTCCTCTTCCTCCGCCCCCCC
TGCCGCCGCCTGCGGCACCAGGTCTTGACGGACTAGAAACGTTTCCGTTT
CCGTTCGCATTGGAAGCGATTCTTTTTCCGATCGGGCTCAGGCTCAGGTC
TGGGGCCGTTCTGGGGCGCTGCCGTCTGGTGGCACCCCTGCTTCCTTCTC
GGGCAGGCATCTCCACGAGCTGATCTCCACAGCACTCGCTGAGATAGTTT
GTAATCCACCCGCGCGCGCGGCCCGCGTTCCTCGTTTAAAAAAAACTCCG
GCTATACAGCCCGCAGAAGGAGTTGCTCTTGTCTGACTCCCGCACACGAA
ACGGAGACTGCTGTCCTTTACAACGCGGGTGCGACGCCCCGGTGGTGGTG
GGTGCTATCGCTCGTCGTGACCCCCTCCCCCCGAACGAAACGGAGCAGGG
GAAATTGTTTTGTTCCGAGAAAAGAGACGCTCTCGGCTATGTGCCTCTTG
TTATTTTAGTTGGTGAGGACGGCAAGTGTTTTTTTGCCTGCGCTCCCCCT
GTGCTCAGCGACAGCCCACGCAAGCAAGTCACCACCAGGAATGGCAAATC
AGCTCAGCAGCCCTCAGCTTAGAGAGAACGGTATGACTCCATGGTCATCT
TCGTGTAAACACGAACAGACCAACAGAACCCGGTGTCTTCTTGACGTTGC
CCCAACACCTGGTGCCCGCTGCTGCTGCTTCCGCTGGGTCCAGAAAGAAG
TTGTCGATAATTTTTTTCAGACGGAGAAATGGAACACAACCCCCCCTCTT
TGCTCCGTCGCAGCTTTCTC back to topCoding sequence (CDS) from alignment at Scaffold_392:165401..167170- >EsuBft151_7a-0001 ID=EsuBft151_7a-0001|Name=EsuBft151_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=186bp|location=Sequence derived from alignment at Scaffold_392:165401..167170- (Ectocarpus subulatus male Bft15b)
ATGATCACTTCAACTTCCTGCCGCCCAACGCCTCTTCTCTTCCCGGGCGG
CACCGCGGGCGTTAACAACGGAGCGCGGCGCGGGGCTACTGGTGGTCTGA
GAAGGATGTGCGCGACAATCAAGCTCGTTGAAATGATAAGGGCTGGGATG
GTGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTCTGA back to top
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