Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1467_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 29 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1467_5a-0001 ID=EsuBft1467_5a-0001|Name=EsuBft1467_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=298bp|location=Sequence derived from alignment at Scaffold_189:276633..277411+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGAACTACGCGCACGGCCTTTCGGCGACCATATCTGATTTGCGGCC
CGTGGTCACGAAAGTGCTAGAGCCATCTGAGGATCTAAAGAACACGCACA
CATCTGACGAGAAAAAGGTATGCAAGAGCCCGAAGAGGTACACCTAAAAA
TCCCTGCAGCACCGTATGCGTGCCCAAAAACTGAACTGCACGTCCGTCCC
ACCGTTCGACTACAGTAGCATCACCCCCTCCCTGTCCCACTCTATACCAA
AACGGAAGATTGCCGACTACAGCATAATGCTGTCTGAAGTGCTGTCTG back to topprotein sequence of EsuBft1467_5a-0001 >EsuBft1467_5 ID=EsuBft1467_5|Name=EsuBft1467_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=48bp
MLNYAHGLSATISDLRPVVTKVLEPSEDLKNTHTSDEKKVCKSPKRYT back to topmRNA from alignment at Scaffold_189:276633..277411+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1467_5a-0001 ID=EsuBft1467_5a-0001|Name=EsuBft1467_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=779bp|location=Sequence derived from alignment at Scaffold_189:276633..277411+ (Ectocarpus subulatus male Bft15b)
ATGCTGAACTACGCGCACGGCCTTTCGGCGACCATATCTGATTTGCGGGT
ACATATGTGTTCGTGGTTTGCGCTGGAAACGTTTCCAGCATTGGAGTACT
TGCACATGAACATGTCCGGATTTTTCCGAGGTCGCGCTTCCCATACGGGG
AGCATACGAGTTGTCACGTTGTCTCAAAGTGAGCGGTAGCTTCGTACGGA
GCGGTATGTAGATCACGTGTCCATACCGATTCACCATGTCGTCTGCTTCC
GTGGCTCATTCTCGCTCCCCTCTTCACCGCGGGTACGTGCATTACAACAG
CCGGACGCGCAAGTTGGAATCGTCTGGATCACGCCCTCCTTGCTTCTGTG
ACTCCGACAACGGGCATCCACCATCTTCGCTAGCAATGGAACCTCTTGCT
TGTCGGTTCCATTTTCGGCTTTCCGGTGAGTTTTTGGAGAAGTCTCTGAT
GCTGTTGTTGTTGTTGTTTGTCTTCACATTAAACCGTATGTCAGTTGCTA
AATGCCAAAATCTAGCAAAAGACTCTCAGCCCGTGGTCACGAAAGTGCTA
GAGCCATCTGAGGATCTAAAGAACACGCACACATCTGACGAGAAAAAGGT
ATGCAAGAGCCCGAAGAGGTACACCTAAAAATCCCTGCAGCACCGTATGC
GTGCCCAAAAACTGAACTGCACGTCCGTCCCACCGTTCGACTACAGTAGC
ATCACCCCCTCCCTGTCCCACTCTATACCAAAACGGAAGATTGCCGACTA
CAGCATAATGCTGTCTGAAGTGCTGTCTG back to topCoding sequence (CDS) from alignment at Scaffold_189:276633..277411+ >EsuBft1467_5a-0001 ID=EsuBft1467_5a-0001|Name=EsuBft1467_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=147bp|location=Sequence derived from alignment at Scaffold_189:276633..277411+ (Ectocarpus subulatus male Bft15b)
ATGCTGAACTACGCGCACGGCCTTTCGGCGACCATATCTGATTTGCGGCC
CGTGGTCACGAAAGTGCTAGAGCCATCTGAGGATCTAAAGAACACGCACA
CATCTGACGAGAAAAAGGTATGCAAGAGCCCGAAGAGGTACACCTAA back to top
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