Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1467_2 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SignalP-noTM |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 17 |
| Hectar predicted targeting category | signal peptide |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-26_004710.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1467_2a-0001 ID=EsuBft1467_2a-0001|Name=EsuBft1467_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=174bp|location=Sequence derived from alignment at Scaffold_189:305066..305239+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGGGCGTGGTCGCTGATTCTGGCGTGTGTGCTGCCCCTGGTGCTCGC
ACACGGCACGGAAGACGACCCCATCAACACCCCTGAAGGAGATTGCTGCG
CTGCTCTCCTCGTCGAGGGCGAGGAGGGCTCCCTCGACGCCGCCGGCAAA
TACCGTCTGCCGCCCATTTGGTAA back to topprotein sequence of EsuBft1467_2a-0001 >EsuBft1467_2 ID=EsuBft1467_2|Name=EsuBft1467_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=57bp
MRAWSLILACVLPLVLAHGTEDDPINTPEGDCCAALLVEGEEGSLDAAGK
YRLPPIW back to topmRNA from alignment at Scaffold_189:305066..305239+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1467_2a-0001 ID=EsuBft1467_2a-0001|Name=EsuBft1467_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=174bp|location=Sequence derived from alignment at Scaffold_189:305066..305239+ (Ectocarpus subulatus male Bft15b)
ATGAGGGCGTGGTCGCTGATTCTGGCGTGTGTGCTGCCCCTGGTGCTCGC
ACACGGCACGGAAGACGACCCCATCAACACCCCTGAAGGAGATTGCTGCG
CTGCTCTCCTCGTCGAGGGCGAGGAGGGCTCCCTCGACGCCGCCGGCAAA
TACCGTCTGCCGCCCATTTGGTAA back to topCoding sequence (CDS) from alignment at Scaffold_189:305066..305239+ >EsuBft1467_2a-0001 ID=EsuBft1467_2a-0001|Name=EsuBft1467_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=174bp|location=Sequence derived from alignment at Scaffold_189:305066..305239+ (Ectocarpus subulatus male Bft15b)
ATGAGGGCGTGGTCGCTGATTCTGGCGTGTGTGCTGCCCCTGGTGCTCGC
ACACGGCACGGAAGACGACCCCATCAACACCCCTGAAGGAGATTGCTGCG
CTGCTCTCCTCGTCGAGGGCGAGGAGGGCTCCCTCGACGCCGCCGGCAAA
TACCGTCTGCCGCCCATTTGGTAA back to top
|