EsuBft1350_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1350_4a-0001
Unique NameEsuBft1350_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_30contigScaffold_30:411348..419874 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FR78
ProteomeIdEsuBft1350_4
Protein domainsTMhelix
Protein domainsIPR025067
Protein domainsSIGNAL_PEPTIDE
Protein domainsSignalP-TM
Protein domainsSIGNAL_PEPTIDE_N_REGION
Protein domainsSIGNAL_PEPTIDE_C_REGION
Protein domainsCoil
Protein domainsCYTOPLASMIC_DOMAIN
Protein domainsSIGNAL_PEPTIDE_H_REGION
Protein domainsNON_CYTOPLASMIC_DOMAIN
Protein domainsTRANSMEMBRANE
Protein domainsSignalP-noTM
Ownerapollo_admin@sb-roscoff.fr
Nb exon7
Max annot lvl2759|Eukaryota
Length192
Hectar predicted targeting categorychloroplast
Evalue9.1e-205
EggNOG OGs28KJR@1|root,2QT15@2759|Eukaryota
Ec32 ortholog descriptionProtein of unknown function DUF4079
Ec32 orthologEc-08_005070.1
Date last modified2016-06-13
Date creation2016-06-14
DescriptionProtein of unknown function (DUF4079)
COG categoryS
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1350_4aEsuBft1350_4aEctocarpus subulatus male Bft15bgeneScaffold_30 411348..419874 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1350_4a-0001EsuBft1350_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_30 411393..419039 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1350_4a-0001-exonEsuBft1350_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_30 411348..411501 +
EsuBft1350_4a-0001-exonagat-exon-42507Ectocarpus subulatus male Bft15bexonScaffold_30 413526..413830 +
EsuBft1350_4a-0001-exonagat-exon-42511Ectocarpus subulatus male Bft15bexonScaffold_30 414887..414969 +
EsuBft1350_4a-0001-exonagat-exon-42506Ectocarpus subulatus male Bft15bexonScaffold_30 415652..415769 +
EsuBft1350_4a-0001-exonagat-exon-42509Ectocarpus subulatus male Bft15bexonScaffold_30 416065..416178 +
EsuBft1350_4a-0001-exonagat-exon-42508Ectocarpus subulatus male Bft15bexonScaffold_30 417766..418020 +
EsuBft1350_4a-0001-exonagat-exon-42510Ectocarpus subulatus male Bft15bexonScaffold_30 418983..419874 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1350_4a-0001-exonagat-five_prime_utr-2094Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_30 411348..411392 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1350_4a-0001-cdsEsuBft1350_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_30 411393..411501 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1350_4a-0001-exonagat-three_prime_utr-3184Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_30 419040..419874 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1350_4a-0001 ID=EsuBft1350_4a-0001|Name=EsuBft1350_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1921bp|location=Sequence derived from alignment at Scaffold_30:411348..419874+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TGCTCGTCATCACACACGCATCATACAACACCCAACCTGCTAAACATGAA
AGGGCTCAGCCAGAGAACGACCTTGTGCGCTGCACTTGTGGGTGGTGCTT
CCGCATTTGTCGGCGCACCGCTAATGCGTCCATCTCCTGCCTTTGGACTT
CGAGCGCCTGGCGCACCCACAATGTCGGTGGTGGGTCCCTCCCCGGACAA
CAAGCAACAGCAAGCGGCTGAGGTCTTCGAAGTCGATTTCGACAGCGTCC
GCGAGGCGTTTGACGGCAGCAGCAGCAGCAGCACCGCTATCGACGGCAGA
GGGGCGAGGGGAGGTGCCTTGAACTTTCGCTCAGTCGCCGGGGCGGGCGC
GGCCGCTCTCACCCCCCTGGTGCTGGGCGCAGCGGAGGCCAGCGCAAAGG
GAGGCGAGTTCGGGATCATCGAGGGAAAGACGGCGTCGTTTTTCCACCCC
ATCGTCATGGGCACCATGTTCGCCGTGAGCCTGCGCTCCGCTAAGCTGGG
GCTGGAGTGGCGGGAGCAGCGAACCATGGGCGGAAGAATGAGCACTCTCA
AGGAGCAGCTGCCGGTGTTGTCCTCCGGGTCGCGAGCGTCGACCCCACTG
AAGAAGGAAGCGGACGGCATCCGCTCGAAGCTGGAGGAGCTGGGAGAGGA
CGCAGCCGAGGCGGCGGCTAGCCTGAAGGCGGACCTTGCGAAGCTTTCGT
CGTCTGCGGCAGTGGAGATTGAGCAGGAGCTGAACGACATGGGCGCCCGG
CGGAAAGAGCTCTCGAAAAAGAACGTACGCGACCTTCACTACGACGCCGG
CGCGCTGCTACTCGGGCTCGGGACGTTCGCCGCCGTCGAGGGGCCCGTCA
ACACGTACCTCAGGGCGCAGAAGCTCTTCCCGGGGCCCCACCTGTACGCC
GGCGCCGCGGTGGTGGTGGCATGGGCGGTGGCGGCGTCTCTGGTGCCGAA
GATGCAGAAGGGGGACGACACGGCTAGGATCGCGCACATGGCCATCAACT
TCGGCATGATCGCCCTCTTCGCGTGGCAGATTTTCACTGGCATCCCCATC
GCGCAGAAGGTCTGGGAATTCACAAAGTTCCCTTGAAGCAATTCATGCTG
CATTCCGAATCGGAGCGCCGTCGTTCGACACCGTGTGCGGCGCGCAGCGA
CATTACAGACGGCTTGCTTGCAGTGTGAGGGCGGTGGTTACCCGATTGTG
GGTCCCGGCGTTATTCCGACTTCACCACCCCTCTGATTGGCGGAAAACTA
CGAAGCTTTGCCCTCCTAGAAGCGTGAGCGTTCATGTGCTGAGTACGAAT
CACAAGGAAGTCCGGCGGTTTTGTTTTGTCGAACCCGGAGTGGAGGGGCT
AGGTTAATGCGCGGCTTTGTGAAGAAGCAACCGGTCTGACCGTAAGTTGA
TTAGTCTCAAAGAGAAAAGAGATACGTATCTGAAGAGAAAGAACGGTATC
TATAGAGAAAAAGGAGTCTGAAGCACGTGTGCATTCTTACGTAGATTTCG
TGTAGTGTCTTCGCACTGGATTGAACGGGCGGGTTGTTCCGGATAATCTT
CGTTGTTGCATGCGAGGAATCTGCTTCCACTATCCCCTAGGGACGTTAGA
AAAAAGCATCGCTGTCACGACACAACAGCTCACATACAGCGTACTATTGT
TGGTTTTCGGGTGTCAGTGTGAAGATGGATGCAGATCTACCTGCGTTGTT
TTTGCTTCTCTACTGTGTTTCGGTTCATGTGCTAGCAACCAATCGACGGC
ACTTGTGGTTTTCTCTCAAGTCGTTGGCGTTCCAGACGGTCGATCTCGAG
GTAGTCGGATCATGGCACAAATACCATGACTAACTTGAGCGAAGCAGTAC
CGATGAATCGCAAGCGATAATGTCCGCTTCAGCCTCTACACTTTGTGTTT
TTTGCATTGAAGACGCATCAG
back to top

protein sequence of EsuBft1350_4a-0001

>EsuBft1350_4 ID=EsuBft1350_4|Name=EsuBft1350_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=346bp
MKGLSQRTTLCAALVGGASAFVGAPLMRPSPAFGLRAPGAPTMSVVGPSP
DNKQQQAAEVFEVDFDSVREAFDGSSSSSTAIDGRGARGGALNFRSVAGA
GAAALTPLVLGAAEASAKGGEFGIIEGKTASFFHPIVMGTMFAVSLRSAK
LGLEWREQRTMGGRMSTLKEQLPVLSSGSRASTPLKKEADGIRSKLEELG
EDAAEAAASLKADLAKLSSSAAVEIEQELNDMGARRKELSKKNVRDLHYD
AGALLLGLGTFAAVEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLV
PKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP
back to top

mRNA from alignment at Scaffold_30:411348..419874+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1350_4a-0001 ID=EsuBft1350_4a-0001|Name=EsuBft1350_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=8527bp|location=Sequence derived from alignment at Scaffold_30:411348..419874+ (Ectocarpus subulatus male Bft15b)
TGCTCGTCATCACACACGCATCATACAACACCCAACCTGCTAAACATGAA AGGGCTCAGCCAGAGAACGACCTTGTGCGCTGCACTTGTGGGTGGTGCTT CCGCATTTGTCGGCGCACCGCTAATGCGTCCATCTCCTGCCTTTGGACTT CGAGGTGTGTTGCTAGTGTTTCAGAGTTCAGCTGTAGAGCACGAGATGAG TCATTGCGCATTGCGCAGGCCTGTGCACACGCGCGGCATGCTCTCGGCCT CCTCTGTTGGATCGGCGCTTGAAGTTTCTCGAAGGGATATATGCTCCTCC ATTGCAAAGCACTGGTCATTTATGATGGTGGACGATTAGGGAGGTAACCA ACGTATCGGGACCGGACTCTGTGTTCATGTTCTTAACGCCCAGTCTATAG ACTATGTGTGTAGCTGCTCCTCTCCCTACGCCGTCGTGCGTGTTTGAACA GCAGCAGTCAGTGTGAGTTCCCGGGCCTGTTGACTGAGAGGGGGAGAAAA GAGCTCTCATTAGTGAGGGGGGATGTTATGGCACCTGTTATGGCACCTCT GCCTTTTATGAAATGAAATTGAGCCGTCGAGCTGCACAAATGTGTCATAT CCGTTGGAAACAAGACCTAATCGCCCACTCCATAGACTATTATCTTCATA TCCGTGTACTGATCTGCAAGCAGCAAGAAAGTCCGGGTTGTCTGAATCCA ACGTCGATTTTCAGCAGCAGTCCGCTCTGTTCATGGAGAGGAGTTTAGAC CAACGGGAGGTGTGCCAATACAGAAACTCTCTGTGCCAGGTTTCCAGTCT CTTGTACGACAAATCATCGTCAACGGTACCTATCTACATGCCGGCGATTG ATGTCGGCTTTGGGATTGGAGTTTTTTCTCGAAAAGCTGAAAAGACTACT GTACGTTTCCACCTTCTTCATTCTCTGTGTAACCTGGATGGTTGTAGTTG TACGAAAAATACACTAAAAAGTGTAGTATTCTACATACGCTGAAAAGTGT GATACACGTCTCACCACGAAAACTGCGGGGACTGTCGCCATAACAAATAG GACGCAAACACGGACCTTGATTTCTACCCGCTGGCACTGACGTCTTTTAA TTGGTCAGCCGGTTAGCGCCGTCGATGCTAATAATAAAAACATACAGCGC GTTCGGGTGATTTCGTCTTCCCTCCAGCGCCCCCCCCCCTCGGTGTTTGC CATCGGGGTTGGGGTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCG CCCCCCACGGTGTTTGCCATCGGGATTGGGTTTTCGTCGCTTGGCAACGA CGTTGCAAAACAAGCCAATTCACTTCATGAGCTCGGCAACCAGGTTACCG TTTTTTTTTTTACCTCCGTTTTTTTTTATTTGGCGGTAACCATAATGGTG GTCGAGTAGATCATGTTGTGCGGGGTCGAGAAGCCTCACTCCACGCAAGG GGGATGATCGCACCACGTTATGTTAAAATGGTCAAGCACCCTCGAGGCNG GATGCAGCGCACCCTTCATGCGACTCGCCGAATATCTCACGGCGCTTCGC GCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCC CGGCTTTGTAGGGATGCGAGGTCAATGGTGTAACGATTTCGCATGCACAA CTATGAGTACACCCCCCCACCGGCCTGCTTTCCAACTTTCGGCAGCAAAG TCACCTTTTCTACACCCAACAGAACGATTGGCTGCTTCCGAGTGGATAGT CTTGGAGAAGTGTGCCTCGTGAGCCGTTCGGCAACCCCCGGACTTGGAAG GCTCGCGCAGAGCTACTGATTTGCTGTTGATTGATAAAGCGAAGCCTCTC TGCCAAAAACTTGTCGATGGTTCACGGCCCATGGTACACTAGCACGTGCT GCTGCGTGTGCCGTCCTCCTTTCGCACAAAAGTAGATTTGCTGGTTGACG CTCTGTACATTTCTTCCGTACCGGCGTGTTTTGTGTGGTGTCTTTCATCT CTGCCTCCGTGTTTTTCCTACCGTGGGAGCGTGTCATCTGAACAACCACG CTCATCAAGAAAGTCCTCATGACGGTGGCGCCGCTGCTAGACATCTCACG CCATTGTCTTGCCTAACTACTCCCCATGACCACACACCCCCCTTCTCTCG CCAAAAATTTGCTGCCTCCGCCCAGCAGCGCCTGGCGCACCCACAATGTC GGTGGTGGGTCCCTCCCCGGACAACAAGCAACAGCAAGCGGCTGAGGTCT TCGAAGTCGATTTCGACAGCGTCCGCGAGGCGTTTGACGGCAGCAGCAGC AGCAGCACCGCTATCGACGGCAGAGGGGCGAGGGGAGGTGCCTTGAACTT TCGCTCAGTCGCCGGGGCGGGCGCGGCCGCTCTCACCCCCCTGGTGCTGG GCGCAGCGGAGGCCAGCGCAAAGGGAGGCGAGTTCGGGATCATCGAGGGA AAGACGGCGTCGTTTTTCCACCCCATCGTCATGGTGAGCAACGAGGGCAA AGGGTCGGCTGGGAGGGTGGTCTTGCGCCGCGCGCTCGGTTGGAACGACC GATGAGGGAGGTTCGAGGGAAGAGCAGACTGTTGCAGGCGGGTTCAGGGG CGGGGTGATGCTGTGAGCAGACGGCGGTCGAACTTTGCAACAATTGAGCT ATACATTTATTTGTGGTTTAGGGAAGGAAAGGAGGCATGTGCTAACCCGG GCTGGAGGAATCGGGGGAGGCACCGTAGGATGGTCCCCGCGGCAGTGGGA TCCCCATCTAGACTCACGGAATGCGAGGTTTGCAGCCTTTCAGGCGTGTT TTGAGTCACAGTACCATTTCCACCGAGTTGTGGCTCGGCGGAAAATGGTG TGGTGCAATACGCGGGATGGAATGTGTTCCGCCGTATGGGACAACCGCTG CTGTNCCGGGGTCTCACCGGACCAGGCTCTCACATCACCAAGCGCGAAGC GCCGTGAGGTATTCGGCGAGTCGCATGAAGGGGCCCTAAGGGTGTTCGGC ATCTTGTGCTTACTTCCTTGCGTACGGATGGCAGCTGCGTATGACTTAGT TTGTTTTCTGGTGCTTCCACTTCCAGAGACAGTTATATGCACTTTGTACC TGCCTCGAGGGTGCTTGGCCATTTAAACATAACGTGGTTCTATCATCCTC CTTGCGCGAAGTGAGGGTTCTCGTCCCCGCACAACATGATCTTCTCGACC ACCCACTTGGTGACCGCAAAAAAACAAAAACCAGAGGGAAAAAAAAACGG TAACCTAGTTGCCGAGCTCACGAAGTGAATCGGCTTGTTTTACGACGTTG CCAAGCGACGAAAACCCAACCCCGATGGCAATACCGGGGGGGGGGGTGGG CTGTTCAATGGCGGTATGTGCCCAGAGAAATGACCGGCACGACTCATAGT ACAGAGTTGACCTGGTGATTTAGTCTGTGCCAGCCGAAAAAAACATCACA ATATGGGGGCACCGGCACTATTCAACCGGCACTAAAATAGTTGCCCCCCC GTATACATGTATTTTGGTGGACGGCGGTCGATTTTTCAGGGCACCATGTT CGCCGTGAGCCTGCGCTCCGCTAAGCTGGGGCTGGAGTGGCGGGAGCAGC GAACCATGGGCGGAAGAATGAGGTGAGATGGGCTTCAGCAATACAGCTCC CTCCGTACGGTCGATCAATCCACCGGACAATGTCATCGGTGCTGTCGTCG ACACTGTCCTCTGTTGCTGTTGGTCGTGGCGGTGAGGTTGCACGCGGGCC CTTTTTGTTGGAGTTTCGTTGGTCACGATGTACAGCGGCAAGAGCAGGTG TGCCAGACGGGGTGGACGAGCGCTTCGTGGTCGACGGGCGGCATTCCGCC ACCGTGTAGGTAGCTCGCTCGTTTCGGTTGCCGCCCCCTCGTTTCCCCTG ATCTAGGAGGTCGTGTCCAGTCGCAGAAATGACGTTTTGTCGTGTCATCG AGGAAGTATATGTACCACGTATATCAAGCTCAGCGTGCCCTCCAGGCTAG GCATATCTGTCATGACTTACCCTATCCTTTTCTACGCGTTTCAGTAAGTT TTCGATCATCGCTCGCCCCCCTTTAGCTTGATAGGGAGCTCTTTTCAATT GACCTCGAGTTGCACGTGCAGTAGGGCACAAGGAAGGACGAAGCCAAACT CCCGGATGGTGATGATGTTGGCTATGGAGCAATACCGCGTTGTCAGTCCA TGTGTAACGGTAATACTGCTGTGGCAGGTAGACAGGTACCGTACTCCCCA CATCTCAGTCGCGGCACATGATCCACCCCTCCCGGTTTTCCGCCGTTCTG TCAGCACTCTCAAGGAGCAGCTGCCGGTGTTGTCCTCCGGGTCGCGAGCG TCGACCCCACTGAAGAAGGAAGCGGACGGCATCCGCTCGAAGCTGGAGGA GCTGGGAGAGGACGCAGCCGAGGTGATAAACAAAAAATGCGAAATAGGTA CTGCTGTGTAGTGCCTTTGCATTGAAAGTAAGGTTATCACCATACATGTA AAAGACCAGGAAAGGGATACGCAGACCCTATAACCCTAACCCACACCCTC AACTTTGCCGATTCTATCAATTTCATCCAGTATGTTTGCTGACGTAGAAC GAGCTGCGCAGACTACTGCTGCCAGCGACGATTTTCTGTTGCTCCGTCTT GTTTCTTTCTTAGACTGATGCCCTGCACACCTTTCCATTATTACGTTTCT TGTTTTTGTCGGAGCAGGCGGCGGCTAGCCTGAAGGCGGACCTTGCGAAG CTTTCGTCGTCTGCGGCAGTGGAGATTGAGCAGGAGCTGAACGACATGGG CGCCCGGCGGAAAGAGCTCTCGAAAAAGAACGTGAGGAAAACACGGAGAA AGATGTGGTGCGAGGCAGGGAGGGGGATGGACACAGAAACCAAACACAGA CCTTCCAGGGACCTTGGTTTTTCCCGCTGGACACTGACGCCTTTTCATTG GTCAGCCGGGTAGCGCGGTCGATGCTGATGTTAACAAGACACAGACAAAG GCCGGAAGGCTTGTCCGCTTCTTTGATGACGCTTTTATGAAGACTGATCC GGTTTTGCGAAGACTGACATTGTTTCGTTGGTCGGGCGGATAACGCGGAC ATACGCTGGAAGGCTGGTGCGTTTGTGATGGCGCTATTCCAGGCTTAAGT ATTTTCATTGGCCAACTAGAGAGTGCGATCGCGCCGTTGCTAGAATGAGA CACGGGTAGGCACAGAACCGTAAACACACACCGACAGACACACGGGGACG AAAAGACGGCCATGGTGATGGGCAGGACGGCAAGCGGAGTGCAACATGCG GGCAACACGGAGGAGGACGACGTGAACATGGACGAGCACCGGGGGAAGAC TGGTCGATGGAGCTCTGTTAGTGGAGGGGGAGCTGACGAATATGTTGCAG CAACAGAGTCTTCGCTCGGAAGCACCGATACGAAAGAGCACAGGGGTAGC GTGGGCGCATGCTAACATGTGGCGGGGGAGAGGGCACAGGGCGGAGAACA TGACTGAGGCGGTTGCAAAGGGAGAAAGCAGGGGGGATGGATTCGAGCGT TGCTATTGGAGCGCTTGCGGCTGGCTGGCGAGTAGAAGGTCGATCTTTCC GGGAAGGTTGAGAAAGAATAAAAGTGGCGGACAGGAAGAGCGACGAGAAA TCGAACGAGACGAGGAGAAATTCCTCGACAGATAGAAGAGAGGTTGGGGC CTTGTGAGTCAACACAACGGATCCAGAGACTTGGACGGTCTGAGGCGTCG AGGAGGGGCTAAGCTTAAGGGAGGATTACGCCCGGTCGAGGCAACGTGTT TTCGTGCACACAGGGTATATCGCCAGGATTACGATATGGACCAGATGGTG CACGAGGATGAGACCATTTTTGCCGAAAAATCACTGTGGTCGGCATTAAC ACCCTACCTCACGGAAAATCGCTGTGTTTTGTGTTTGCGTCGTACCCCCG ACCACACAGCTCTCTTGTACACATCCCGATCCGTTTCTCCCAAAATCCCC GACACCGACAAGATAACGAGTTGCCTGCGTGTTTGATGCGTGTTTTTTAC TTTCACGACGCCGCGGTCGTAACGCTGCCCGTACTCATGACAATGCCGAC GGCGATCAGGTCGCCCCTTCCTCACCAACTTCCACATCACTACCCGTCGG CCGCTTCCACTCCCACCTGGGTAGATTGTACGTTTCGCCGTCAACCTACA TCCTTACGTTTAGGTTTGCATTGCCCCACATGCCTCCCTCCATACCATGA AACCACTGCCTTTGCTCTGCAAGGATGACGACCAGCTTCTGGTTCATCCT TGTGAAAAGTAACCTGGGCCGATGAAATCATATCGCCCCGTCCCCGGCAT TACAGGGATACAATGCTCTGACCATTCATTTTCGTGAGCGCCCCCCCCCC CCCCCCCCCCCCTTGTAGGTACGCGACCTTCACTACGACGCCGGCGCGCT GCTACTCGGGCTCGGGACGTTCGCCGCCGTCGAGGGGCCCGTCAACACGT ACCTCAGGGCGCAGAAGCTCTTCCCGGGGCCCCACCTGTACGCCGGCGCC GCGGTGGTGGTGGCATGGGCGGTGGCGGCGTCTCTGGTGCCGAAGATGCA GAAGGGGGACGACACGGCTAGGATCGCGCACATGGCCATCAACTTCGGCA TGATCGCCCTCTTCGCGTGGCAGGTGCGTGCGGGTGCGTGTGACAGTATC CACTTTTCGTGTGTTGTTTCGAGTATTTTTGTTCGGGATATTTGTGGGGG GGGGGGGCTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGGGGGGGGGGGGCTAGGTGCTGTGAGAGTGGTTGGGAGGAGACAC GGTGGTTGAGATGGAGGCGTACGCGCAGCGGGGGGGCGGGGGCGGTACAT GGTTGTGTTGATACACTTTTTTCGTGTGTTTTTCGTTTCAAGGTGTGCTC GGGGGTATAGGTGTTGCTCCCACCGCTGCGGAGGCGTTTTCAGGGGAGGC AAAGGCCAGAAGTCGGCCAGGTGGACCGGGAGCTCAAGCACGCGTTACGA AGTTGCAACCGGTTCCCTCAAGAAGGAGCCCTTGGCATTGGTGTTATGAC TGTATGCCGAAGGTTGCTGGACGAGATGGCATTGCCCAAGAAGGATTTGG GGGGGTGGGGGGCACGAAAAACAATCCCAGCTTCGGTAACCCCCCAAGTG TGAAAACAGTAACAACAGGGTCGACGGAGCATGTTTTTTTTTCCGATTTT TTTTAATGTTTTGTTCCCTAAGGCCCACATAGTCATCTACGCTATTTCGA GATACACTAGTCTGCTGGGTTCCCTCCCCCCCCCTGAGGGCGCCAGTTTT TTTTTTGCTACGGGAGGGAAGTGAACATTTCAGCCGTGTGAATCTGGGGA GCATGTATTCGCGTGCAACACCTGCCTGCCACGGGACCCCCCCCCCCCCC CCTCCGTTCCATTTCCTCATGTTCTAACCCTCTCACCCTCTCGCGTGATT CTGTTCCTGCGCACTGTTTTGGTCCACGCGGGCAGATTTTCACTGGCATC CCCATCGCGCAGAAGGTCTGGGAATTCACAAAGTTCCCTTGAAGCAATTC ATGCTGCATTCCGAATCGGAGCGCCGTCGTTCGACACCGTGTGCGGCGCG CAGCGACATTACAGACGGCTTGCTTGCAGTGTGAGGGCGGTGGTTACCCG ATTGTGGGTCCCGGCGTTATTCCGACTTCACCACCCCTCTGATTGGCGGA AAACTACGAAGCTTTGCCCTCCTAGAAGCGTGAGCGTTCATGTGCTGAGT ACGAATCACAAGGAAGTCCGGCGGTTTTGTTTTGTCGAACCCGGAGTGGA GGGGCTAGGTTAATGCGCGGCTTTGTGAAGAAGCAACCGGTCTGACCGTA AGTTGATTAGTCTCAAAGAGAAAAGAGATACGTATCTGAAGAGAAAGAAC GGTATCTATAGAGAAAAAGGAGTCTGAAGCACGTGTGCATTCTTACGTAG ATTTCGTGTAGTGTCTTCGCACTGGATTGAACGGGCGGGTTGTTCCGGAT AATCTTCGTTGTTGCATGCGAGGAATCTGCTTCCACTATCCCCTAGGGAC GTTAGAAAAAAGCATCGCTGTCACGACACAACAGCTCACATACAGCGTAC TATTGTTGGTTTTCGGGTGTCAGTGTGAAGATGGATGCAGATCTACCTGC GTTGTTTTTGCTTCTCTACTGTGTTTCGGTTCATGTGCTAGCAACCAATC GACGGCACTTGTGGTTTTCTCTCAAGTCGTTGGCGTTCCAGACGGTCGAT CTCGAGGTAGTCGGATCATGGCACAAATACCATGACTAACTTGAGCGAAG CAGTACCGATGAATCGCAAGCGATAATGTCCGCTTCAGCCTCTACACTTT GTGTTTTTTGCATTGAAGACGCATCAG
back to top

Coding sequence (CDS) from alignment at Scaffold_30:411348..419874+

>EsuBft1350_4a-0001 ID=EsuBft1350_4a-0001|Name=EsuBft1350_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1041bp|location=Sequence derived from alignment at Scaffold_30:411348..419874+ (Ectocarpus subulatus male Bft15b)
ATGAAAGGGCTCAGCCAGAGAACGACCTTGTGCGCTGCACTTGTGGGTGG
TGCTTCCGCATTTGTCGGCGCACCGCTAATGCGTCCATCTCCTGCCTTTG
GACTTCGAGCGCCTGGCGCACCCACAATGTCGGTGGTGGGTCCCTCCCCG
GACAACAAGCAACAGCAAGCGGCTGAGGTCTTCGAAGTCGATTTCGACAG
CGTCCGCGAGGCGTTTGACGGCAGCAGCAGCAGCAGCACCGCTATCGACG
GCAGAGGGGCGAGGGGAGGTGCCTTGAACTTTCGCTCAGTCGCCGGGGCG
GGCGCGGCCGCTCTCACCCCCCTGGTGCTGGGCGCAGCGGAGGCCAGCGC
AAAGGGAGGCGAGTTCGGGATCATCGAGGGAAAGACGGCGTCGTTTTTCC
ACCCCATCGTCATGGGCACCATGTTCGCCGTGAGCCTGCGCTCCGCTAAG
CTGGGGCTGGAGTGGCGGGAGCAGCGAACCATGGGCGGAAGAATGAGCAC
TCTCAAGGAGCAGCTGCCGGTGTTGTCCTCCGGGTCGCGAGCGTCGACCC
CACTGAAGAAGGAAGCGGACGGCATCCGCTCGAAGCTGGAGGAGCTGGGA
GAGGACGCAGCCGAGGCGGCGGCTAGCCTGAAGGCGGACCTTGCGAAGCT
TTCGTCGTCTGCGGCAGTGGAGATTGAGCAGGAGCTGAACGACATGGGCG
CCCGGCGGAAAGAGCTCTCGAAAAAGAACGTACGCGACCTTCACTACGAC
GCCGGCGCGCTGCTACTCGGGCTCGGGACGTTCGCCGCCGTCGAGGGGCC
CGTCAACACGTACCTCAGGGCGCAGAAGCTCTTCCCGGGGCCCCACCTGT
ACGCCGGCGCCGCGGTGGTGGTGGCATGGGCGGTGGCGGCGTCTCTGGTG
CCGAAGATGCAGAAGGGGGACGACACGGCTAGGATCGCGCACATGGCCAT
CAACTTCGGCATGATCGCCCTCTTCGCGTGGCAGATTTTCACTGGCATCC
CCATCGCGCAGAAGGTCTGGGAATTCACAAAGTTCCCTTGA
back to top