Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1323_9 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 103 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1323_9a-0001 ID=EsuBft1323_9a-0001|Name=EsuBft1323_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1038bp|location=Sequence derived from alignment at Scaffold_106:6564..7601+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGATGGTGCCGCTGATCGCAGCAATGCTAGGGAGAGCGCCGTCGCGGA
GTCCATGAACGCCAAAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACG
GGAGGTACTTGCGCGAACCTGTTCGAGAGTCTGGCCCGTCAAGGCGACAC
AGCGGCGAAGCAGGGGGCTTTGTCCCCCAAGAGGTGAGAGTAGCCGCTGC
TCACAGCCAAGGCTATAGTAGTGCCATGGGAGATGGTGGTGCTGCTGTTG
GCTTTGGATACGGAGCCACAACCCCAGCGACGGGGTACCAAAGTGTGCGG
TACACTTCTCCTCCGTTCAGCGGGAAATCGAAATATCTCAACGAATGGCT
AATTGATTTCCGCATGGCAGCTAATGGATCAAACCTGTTGGAACAATTTG
AAGAAAGCGAGAGCTTGGAGATTCTCGTCAACAGCGGAAAGAGCAAGTTT
TCGCTGTCACAGCAGCACCGGAGCGAGCAAGTAGAGCTCGCACTCCACGC
GTGGAACTTCCTGTCCCCCGCGTTGAAAGAAAAAGATCGGAAAATCATGA
AGACGGCAGAGACGCCCCAGGGAGCTCTTCGTGAGCACAACACCATACAC
GACCCTGAATCATCTGTACAGCCGTCAGAGGACCTCAAGTCCATGACGTC
GACCAAGATCTCTAGAGGTGAAAACCTTCAAAACGCCCTAAATGAGATGC
TCCAAACCGCAAAGTCCTTCACCGAGGAAGGACTAACTGTCAACGAAACG
TTCGTTCTTCACCTCTTCCTGGATGCCCTTTCGGACGAGTATGCCATGAC
AAAGCACAACCTGCGACACGCGAAGGAGTTGACGCGGACCGGTGTGCTAA
AGGAAGCAATGATCGAATAACAGGCGATCAAGGACAAGCTGGAGCAGGGG
AAAGGAAAAGGGGCGAAGGGCGAAGAGCAAGTGTACTTCGCCGACGGTGA
GGGCCGCAGGGAGCGGTACTCAAGTAGGAGTCAGGGGCAAGGTCGTGGTC
GTGGCGGGGGTCGTGGCCGCAGCAGCAGCCGTGGCCGC back to topprotein sequence of EsuBft1323_9a-0001 >EsuBft1323_9 ID=EsuBft1323_9|Name=EsuBft1323_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=289bp
MDGAADRSNARESAVAESMNAKGGAPWTGSAQDGRYLREPVRESGPSRRH
SGEAGGFVPQEVRVAAAHSQGYSSAMGDGGAAVGFGYGATTPATGYQSVR
YTSPPFSGKSKYLNEWLIDFRMAANGSNLLEQFEESESLEILVNSGKSKF
SLSQQHRSEQVELALHAWNFLSPALKEKDRKIMKTAETPQGALREHNTIH
DPESSVQPSEDLKSMTSTKISRGENLQNALNEMLQTAKSFTEEGLTVNET
FVLHLFLDALSDEYAMTKHNLRHAKELTRTGVLKEAMIE back to topmRNA from alignment at Scaffold_106:6564..7601+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1323_9a-0001 ID=EsuBft1323_9a-0001|Name=EsuBft1323_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1038bp|location=Sequence derived from alignment at Scaffold_106:6564..7601+ (Ectocarpus subulatus male Bft15b)
ATGGATGGTGCCGCTGATCGCAGCAATGCTAGGGAGAGCGCCGTCGCGGA
GTCCATGAACGCCAAAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACG
GGAGGTACTTGCGCGAACCTGTTCGAGAGTCTGGCCCGTCAAGGCGACAC
AGCGGCGAAGCAGGGGGCTTTGTCCCCCAAGAGGTGAGAGTAGCCGCTGC
TCACAGCCAAGGCTATAGTAGTGCCATGGGAGATGGTGGTGCTGCTGTTG
GCTTTGGATACGGAGCCACAACCCCAGCGACGGGGTACCAAAGTGTGCGG
TACACTTCTCCTCCGTTCAGCGGGAAATCGAAATATCTCAACGAATGGCT
AATTGATTTCCGCATGGCAGCTAATGGATCAAACCTGTTGGAACAATTTG
AAGAAAGCGAGAGCTTGGAGATTCTCGTCAACAGCGGAAAGAGCAAGTTT
TCGCTGTCACAGCAGCACCGGAGCGAGCAAGTAGAGCTCGCACTCCACGC
GTGGAACTTCCTGTCCCCCGCGTTGAAAGAAAAAGATCGGAAAATCATGA
AGACGGCAGAGACGCCCCAGGGAGCTCTTCGTGAGCACAACACCATACAC
GACCCTGAATCATCTGTACAGCCGTCAGAGGACCTCAAGTCCATGACGTC
GACCAAGATCTCTAGAGGTGAAAACCTTCAAAACGCCCTAAATGAGATGC
TCCAAACCGCAAAGTCCTTCACCGAGGAAGGACTAACTGTCAACGAAACG
TTCGTTCTTCACCTCTTCCTGGATGCCCTTTCGGACGAGTATGCCATGAC
AAAGCACAACCTGCGACACGCGAAGGAGTTGACGCGGACCGGTGTGCTAA
AGGAAGCAATGATCGAATAACAGGCGATCAAGGACAAGCTGGAGCAGGGG
AAAGGAAAAGGGGCGAAGGGCGAAGAGCAAGTGTACTTCGCCGACGGTGA
GGGCCGCAGGGAGCGGTACTCAAGTAGGAGTCAGGGGCAAGGTCGTGGTC
GTGGCGGGGGTCGTGGCCGCAGCAGCAGCCGTGGCCGC back to topCoding sequence (CDS) from alignment at Scaffold_106:6564..7601+ >EsuBft1323_9a-0001 ID=EsuBft1323_9a-0001|Name=EsuBft1323_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=870bp|location=Sequence derived from alignment at Scaffold_106:6564..7601+ (Ectocarpus subulatus male Bft15b)
ATGGATGGTGCCGCTGATCGCAGCAATGCTAGGGAGAGCGCCGTCGCGGA
GTCCATGAACGCCAAAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACG
GGAGGTACTTGCGCGAACCTGTTCGAGAGTCTGGCCCGTCAAGGCGACAC
AGCGGCGAAGCAGGGGGCTTTGTCCCCCAAGAGGTGAGAGTAGCCGCTGC
TCACAGCCAAGGCTATAGTAGTGCCATGGGAGATGGTGGTGCTGCTGTTG
GCTTTGGATACGGAGCCACAACCCCAGCGACGGGGTACCAAAGTGTGCGG
TACACTTCTCCTCCGTTCAGCGGGAAATCGAAATATCTCAACGAATGGCT
AATTGATTTCCGCATGGCAGCTAATGGATCAAACCTGTTGGAACAATTTG
AAGAAAGCGAGAGCTTGGAGATTCTCGTCAACAGCGGAAAGAGCAAGTTT
TCGCTGTCACAGCAGCACCGGAGCGAGCAAGTAGAGCTCGCACTCCACGC
GTGGAACTTCCTGTCCCCCGCGTTGAAAGAAAAAGATCGGAAAATCATGA
AGACGGCAGAGACGCCCCAGGGAGCTCTTCGTGAGCACAACACCATACAC
GACCCTGAATCATCTGTACAGCCGTCAGAGGACCTCAAGTCCATGACGTC
GACCAAGATCTCTAGAGGTGAAAACCTTCAAAACGCCCTAAATGAGATGC
TCCAAACCGCAAAGTCCTTCACCGAGGAAGGACTAACTGTCAACGAAACG
TTCGTTCTTCACCTCTTCCTGGATGCCCTTTCGGACGAGTATGCCATGAC
AAAGCACAACCTGCGACACGCGAAGGAGTTGACGCGGACCGGTGTGCTAA
AGGAAGCAATGATCGAATAA back to top
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