Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LCG8 |
| ProteomeId | EsuBft1112_6 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 238 |
| Hectar predicted targeting category | other localisation |
| Evalue | 0.0 |
| EggNOG OGs | 2CYV0@1|root,2S6K7@2759|Eukaryota |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-26_005000.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1112_6a-0001 ID=EsuBft1112_6a-0001|Name=EsuBft1112_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2385bp|location=Sequence derived from alignment at Scaffold_189:32837..35769- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAATCTGTTTCGCGTACCATACTTCAAGGTTCAGCAGGTGGAAAGAAC
AGCAAAGCTACCTGAGGATTTAGCAGCAGTCCTACAGCTGCAGACACCCA
TCGGCCAATGGAAGCTTTGCAAGCGTCTTTACCGTGCTCTCGGACACACG
CCCGCTAGCATACCATCTCCTCCCGAAGGGGTCAAGGACGGGCGCTGGGC
GACAGCGTTGGCAGTGACCTTCTTGCGGCGCAGGCCAGACTTGATCGACC
TCACGTATGAGGCTTATAGCCGAGCGATCGCTTGGGTCGACGAGCCGCTC
CTCGCGCAGGCACACAGCCGTCTTCCGCCAGCCGACCTCTACTACCCCGT
GGACGAAGCGGCGTCACGGCAAGGCCGATGGCAGCAGCAGGCCGAGGAGG
CTCTAGAGGAGTGCGGATACGCCTACTTTTTGCCTTCGCCCTCTACTGCT
GCTGCAGACCACAGATGCGGCGGCGGCGAAGAAGGTGATGATGGTGCTGC
TGCACCCCGCCGCCACGTCCCGACGACCTCGAACTTGTCACCGGCGCGTG
CGAAATCCGATAGCACCACCACCAGCAGCAGCAGCAGCCACGTCTCTGGA
GAGATGGAACGCCAGGGGGTGAAGGTATTCCCCTCAGCGACCGCTACCGC
TCCCTGCGTAAGGAGACGAGGCCGACGGCGGGGAGTGTCGGCGAAGTCAC
GCCTCAAGGCCATGGCGGCCGCGAGGCATCAAGAAACGCTTGAGCAGCAG
TCGCAAGGCCTACACCTAGAGATGAAGCGCGCCATGAAGGTGGCCACCAC
GACCTTCAGAGAAGGCGACAGGGTGGAGAGCCGCTGGCGCCGTCCCACCC
GGCTCGACAAAGCAAAGATCGATCCAGGCGCCTGGCACCCCGGCCGTGTG
GTCCAGAGCCACAAGGGCGGCGACAGGGTGGACGTGGTGTTCGAGGACGG
AGACGGCGAGCGCCTGAGCGGTATATCTACCAAGCATGTCCGACTAGCTC
CGCCCCCTTCTTCCTCAGAACGCCCTCCCCTCGTGAGCTCCGGTAGGGAC
GATGATTACGTGACGGCTGCCGGGGTGACGGGAAGAAGAAATAGCTGCGA
CCGACGGCCGTCGTGCGCCCCGACGCCCGCGCCGACCGAGCTGGTGTGCT
CGGCGATCCGTCGCGAGCTCGCGCACATCGCGTGTGCGACCAAGTCCTTG
CGTTGCACCTGGGAAGTCCCCGTGCCTATCAGCCAGGAGATGGCGAGGCT
CAGGATGCTGGAGGAGCGCAAGATGCGCAGTCGGCCGGAATGGCGCGGAT
CGTTTCCCCTAGTCGACTTCAGCGCGACGAAAAGGCTGCCATTCGGGGCC
GGCGGGATGGCCAGGACGGTCGTGCGGAAAGTAAAAAATACTGCCGCATC
GGCGGTTTCCGCGGTGTTAGCCACTCGCGATCATCAGCTGCAGGCGCAGA
GTACCGTTCGCGACGATAGCAGGACGAGGTTGCGAACGGTACAGTCGTCA
CCCTCGTCCTCACTCAAGATGCCGATGACGGTCCCACAAGTACAGCGAGA
TGAGAACGATGACCGTGACCTGGGGCAAGGAGATAGGTGCACTTCCACTG
ACGACAACACGGTCAAGGAGACCAACGCGAGGAGCGCCGGCAAAAGGCGT
TCTTCATCGTCCTCGCCATCTCCCGCGGCGGTGGCGGCGGCGGGCGTGGC
AGCGGCGGCAGGGGCGGAGGCGGCCGGGGCGACGGCTCTCTTAGCGGCAC
AGGCGAAGCTCGTCTCCGCTGCCGTGGCGTACGACAGGTGCGTGGCTGGC
GTCCGCGACTGCCTCGACAGGGGCTGCGCCGCGTTCCGTCTGGCTCGCAC
GTACTCCGAGCAGCAGAAAGCTTTCGAGGAGTCGACGGCTACGTTAGGCC
CCGCACAGCCCGCGCGAGCCGGCTACAAGGACTGGCGAGGGAGTCCCGTG
GTGGGGCTGCAGAGCGCCACGCTCGATGTCGTGGAGGCCATGGACGATTG
GGCGGCGGAGTGGGCGGTGGCCAAAGGTGGCAAAACGGATGCCGGGGGGG
GAGATAACGCGTTTGCAGAGGAAGGAGTCGTGCTAAAAGACGGCGCTGTG
GAGGAAGTCGCTGTCGCGGCGCCGCCGTTTCTGTGGGAAGGGTCGCCGTT
GGTGTCAACGGTCATCGGCCAAAGCGCCAAGCTTGTTGCCGGCGCGCCGG
AACTCAAGGAGTGGTACGGTCCCGGGTTCCCGATCGAGCGGAACCCTTTC
TTTCTCGCTTATCCGGTGGACGACCGACCCGTTACCCCACGCAGCGCTCT
CGTCCGGGCTTGGGTTAACGGGGAGGTAAGCGGTCGGATGGTGGTGGATA
CGAGCGTGTGCAACCAGGAATTCGTCGCTGAGTAA back to topprotein sequence of EsuBft1112_6a-0001 >EsuBft1112_6 ID=EsuBft1112_6|Name=EsuBft1112_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=794bp
MNLFRVPYFKVQQVERTAKLPEDLAAVLQLQTPIGQWKLCKRLYRALGHT
PASIPSPPEGVKDGRWATALAVTFLRRRPDLIDLTYEAYSRAIAWVDEPL
LAQAHSRLPPADLYYPVDEAASRQGRWQQQAEEALEECGYAYFLPSPSTA
AADHRCGGGEEGDDGAAAPRRHVPTTSNLSPARAKSDSTTTSSSSSHVSG
EMERQGVKVFPSATATAPCVRRRGRRRGVSAKSRLKAMAAARHQETLEQQ
SQGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRV
VQSHKGGDRVDVVFEDGDGERLSGISTKHVRLAPPPSSSERPPLVSSGRD
DDYVTAAGVTGRRNSCDRRPSCAPTPAPTELVCSAIRRELAHIACATKSL
RCTWEVPVPISQEMARLRMLEERKMRSRPEWRGSFPLVDFSATKRLPFGA
GGMARTVVRKVKNTAASAVSAVLATRDHQLQAQSTVRDDSRTRLRTVQSS
PSSSLKMPMTVPQVQRDENDDRDLGQGDRCTSTDDNTVKETNARSAGKRR
SSSSSPSPAAVAAAGVAAAAGAEAAGATALLAAQAKLVSAAVAYDRCVAG
VRDCLDRGCAAFRLARTYSEQQKAFEESTATLGPAQPARAGYKDWRGSPV
VGLQSATLDVVEAMDDWAAEWAVAKGGKTDAGGGDNAFAEEGVVLKDGAV
EEVAVAAPPFLWEGSPLVSTVIGQSAKLVAGAPELKEWYGPGFPIERNPF
FLAYPVDDRPVTPRSALVRAWVNGEVSGRMVVDTSVCNQEFVAE back to topmRNA from alignment at Scaffold_189:32837..35769- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1112_6a-0001 ID=EsuBft1112_6a-0001|Name=EsuBft1112_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2933bp|location=Sequence derived from alignment at Scaffold_189:32837..35769- (Ectocarpus subulatus male Bft15b)
ATGAATCTGTTTCGCGTACCATACTTCAAGTACATGAGTAAGCACACCAA
AGAGAACGGCTTTCCAACTTTTTACTACAATCGTCCCATCCACATCTGCA
TACATTCTGTAAGATACATATCGTACATCTAGACCTATTCTTGGGGACAG
TTTCTACACCTTCGGGCGCAAAAATGACAGTTGTAGTCTAGTACAGGTCA
TCCTGTGGCATATGCGTACATGAACTTTACAATACATAACTTTCGTTCGC
TGTGCATGCAGCCCTCATTAATTGAGCGTGCCCTCTTTCTGGCCAATCTC
TCGCAGGGTTCAGCAGGTGGAAAGAACAGCAAAGCTACCTGAGGATTTAG
CAGCAGTCCTACAGCTGCAGACACCCATCGGCCAATGGAAGCTTTGCAAG
CGTCTTTACCGTGCTCTCGGACACACGCCCGCTAGCATACCATCTCCTCC
CGAAGGGGTCAAGGACGGGCGCTGGGCGACAGCGTTGGCAGTGACCTTCT
TGCGGCGCAGGCCAGACTTGATCGACCTCACGTATGAGGCTTATAGGTGA
GGGGAAAGTGCGTGGTGGATACGTAGTTTTTCCATCGAACCGGGCTTGAG
GTTGTGCAAACGGCACTGACTCGTCAACAGTATTAAAGAAACCGTCGTAC
ACCCCTGCAGTAGGTGGTGGGGTCCTGCTGTCGTCTGTTACCCGCAATGC
GCTCGTCCTCATGCTCGCCTTTCCTTTCTGCGACGCACGAATAGTAACGT
AGGTCTCGCCGTCTCACCTCTCAGACTATTTCCCGTCCAACTCTTGCCCG
CTCGACCAACGCAATAGCCGAGCGATCGCTTGGGTCGACGAGCCGCTCCT
CGCGCAGGCACACAGCCGTCTTCCGCCAGCCGACCTCTACTACCCCGTGG
ACGAAGCGGCGTCACGGCAAGGCCGATGGCAGCAGCAGGCCGAGGAGGCT
CTAGAGGAGTGCGGATACGCCTACTTTTTGCCTTCGCCCTCTACTGCTGC
TGCAGACCACAGATGCGGCGGCGGCGAAGAAGGTGATGATGGTGCTGCTG
CACCCCGCCGCCACGTCCCGACGACCTCGAACTTGTCACCGGCGCGTGCG
AAATCCGATAGCACCACCACCAGCAGCAGCAGCAGCCACGTCTCTGGAGA
GATGGAACGCCAGGGGGTGAAGGTATTCCCCTCAGCGACCGCTACCGCTC
CCTGCGTAAGGAGACGAGGCCGACGGCGGGGAGTGTCGGCGAAGTCACGC
CTCAAGGCCATGGCGGCCGCGAGGCATCAAGAAACGCTTGAGCAGCAGTC
GCAAGGCCTACACCTAGAGATGAAGCGCGCCATGAAGGTGGCCACCACGA
CCTTCAGAGAAGGCGACAGGGTGGAGAGCCGCTGGCGCCGTCCCACCCGG
CTCGACAAAGCAAAGATCGATCCAGGCGCCTGGCACCCCGGCCGTGTGGT
CCAGAGCCACAAGGGCGGCGACAGGGTGGACGTGGTGTTCGAGGACGGAG
ACGGCGAGCGCCTGAGCGGTATATCTACCAAGCATGTCCGACTAGCTCCG
CCCCCTTCTTCCTCAGAACGCCCTCCCCTCGTGAGCTCCGGTAGGGACGA
TGATTACGTGACGGCTGCCGGGGTGACGGGAAGAAGAAATAGCTGCGACC
GACGGCCGTCGTGCGCCCCGACGCCCGCGCCGACCGAGCTGGTGTGCTCG
GCGATCCGTCGCGAGCTCGCGCACATCGCGTGTGCGACCAAGTCCTTGCG
TTGCACCTGGGAAGTCCCCGTGCCTATCAGCCAGGAGATGGCGAGGCTCA
GGATGCTGGAGGAGCGCAAGATGCGCAGTCGGCCGGAATGGCGCGGATCG
TTTCCCCTAGTCGACTTCAGCGCGACGAAAAGGCTGCCATTCGGGGCCGG
CGGGATGGCCAGGACGGTCGTGCGGAAAGTAAAAAATACTGCCGCATCGG
CGGTTTCCGCGGTGTTAGCCACTCGCGATCATCAGCTGCAGGCGCAGAGT
ACCGTTCGCGACGATAGCAGGACGAGGTTGCGAACGGTACAGTCGTCACC
CTCGTCCTCACTCAAGATGCCGATGACGGTCCCACAAGTACAGCGAGATG
AGAACGATGACCGTGACCTGGGGCAAGGAGATAGGTGCACTTCCACTGAC
GACAACACGGTCAAGGAGACCAACGCGAGGAGCGCCGGCAAAAGGCGTTC
TTCATCGTCCTCGCCATCTCCCGCGGCGGTGGCGGCGGCGGGCGTGGCAG
CGGCGGCAGGGGCGGAGGCGGCCGGGGCGACGGCTCTCTTAGCGGCACAG
GCGAAGCTCGTCTCCGCTGCCGTGGCGTACGACAGGTGCGTGGCTGGCGT
CCGCGACTGCCTCGACAGGGGCTGCGCCGCGTTCCGTCTGGCTCGCACGT
ACTCCGAGCAGCAGAAAGCTTTCGAGGAGTCGACGGCTACGTTAGGCCCC
GCACAGCCCGCGCGAGCCGGCTACAAGGACTGGCGAGGGAGTCCCGTGGT
GGGGCTGCAGAGCGCCACGCTCGATGTCGTGGAGGCCATGGACGATTGGG
CGGCGGAGTGGGCGGTGGCCAAAGGTGGCAAAACGGATGCCGGGGGGGGA
GATAACGCGTTTGCAGAGGAAGGAGTCGTGCTAAAAGACGGCGCTGTGGA
GGAAGTCGCTGTCGCGGCGCCGCCGTTTCTGTGGGAAGGGTCGCCGTTGG
TGTCAACGGTCATCGGCCAAAGCGCCAAGCTTGTTGCCGGCGCGCCGGAA
CTCAAGGAGTGGTACGGTCCCGGGTTCCCGATCGAGCGGAACCCTTTCTT
TCTCGCTTATCCGGTGGACGACCGACCCGTTACCCCACGCAGCGCTCTCG
TCCGGGCTTGGGTTAACGGGGAGGTAAGCGGTCGGATGGTGGTGGATACG
AGCGTGTGCAACCAGGAATTCGTCGCTGAGTAA back to topCoding sequence (CDS) from alignment at Scaffold_189:32837..35769- >EsuBft1112_6a-0001 ID=EsuBft1112_6a-0001|Name=EsuBft1112_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2385bp|location=Sequence derived from alignment at Scaffold_189:32837..35769- (Ectocarpus subulatus male Bft15b)
ATGAATCTGTTTCGCGTACCATACTTCAAGGTTCAGCAGGTGGAAAGAAC
AGCAAAGCTACCTGAGGATTTAGCAGCAGTCCTACAGCTGCAGACACCCA
TCGGCCAATGGAAGCTTTGCAAGCGTCTTTACCGTGCTCTCGGACACACG
CCCGCTAGCATACCATCTCCTCCCGAAGGGGTCAAGGACGGGCGCTGGGC
GACAGCGTTGGCAGTGACCTTCTTGCGGCGCAGGCCAGACTTGATCGACC
TCACGTATGAGGCTTATAGCCGAGCGATCGCTTGGGTCGACGAGCCGCTC
CTCGCGCAGGCACACAGCCGTCTTCCGCCAGCCGACCTCTACTACCCCGT
GGACGAAGCGGCGTCACGGCAAGGCCGATGGCAGCAGCAGGCCGAGGAGG
CTCTAGAGGAGTGCGGATACGCCTACTTTTTGCCTTCGCCCTCTACTGCT
GCTGCAGACCACAGATGCGGCGGCGGCGAAGAAGGTGATGATGGTGCTGC
TGCACCCCGCCGCCACGTCCCGACGACCTCGAACTTGTCACCGGCGCGTG
CGAAATCCGATAGCACCACCACCAGCAGCAGCAGCAGCCACGTCTCTGGA
GAGATGGAACGCCAGGGGGTGAAGGTATTCCCCTCAGCGACCGCTACCGC
TCCCTGCGTAAGGAGACGAGGCCGACGGCGGGGAGTGTCGGCGAAGTCAC
GCCTCAAGGCCATGGCGGCCGCGAGGCATCAAGAAACGCTTGAGCAGCAG
TCGCAAGGCCTACACCTAGAGATGAAGCGCGCCATGAAGGTGGCCACCAC
GACCTTCAGAGAAGGCGACAGGGTGGAGAGCCGCTGGCGCCGTCCCACCC
GGCTCGACAAAGCAAAGATCGATCCAGGCGCCTGGCACCCCGGCCGTGTG
GTCCAGAGCCACAAGGGCGGCGACAGGGTGGACGTGGTGTTCGAGGACGG
AGACGGCGAGCGCCTGAGCGGTATATCTACCAAGCATGTCCGACTAGCTC
CGCCCCCTTCTTCCTCAGAACGCCCTCCCCTCGTGAGCTCCGGTAGGGAC
GATGATTACGTGACGGCTGCCGGGGTGACGGGAAGAAGAAATAGCTGCGA
CCGACGGCCGTCGTGCGCCCCGACGCCCGCGCCGACCGAGCTGGTGTGCT
CGGCGATCCGTCGCGAGCTCGCGCACATCGCGTGTGCGACCAAGTCCTTG
CGTTGCACCTGGGAAGTCCCCGTGCCTATCAGCCAGGAGATGGCGAGGCT
CAGGATGCTGGAGGAGCGCAAGATGCGCAGTCGGCCGGAATGGCGCGGAT
CGTTTCCCCTAGTCGACTTCAGCGCGACGAAAAGGCTGCCATTCGGGGCC
GGCGGGATGGCCAGGACGGTCGTGCGGAAAGTAAAAAATACTGCCGCATC
GGCGGTTTCCGCGGTGTTAGCCACTCGCGATCATCAGCTGCAGGCGCAGA
GTACCGTTCGCGACGATAGCAGGACGAGGTTGCGAACGGTACAGTCGTCA
CCCTCGTCCTCACTCAAGATGCCGATGACGGTCCCACAAGTACAGCGAGA
TGAGAACGATGACCGTGACCTGGGGCAAGGAGATAGGTGCACTTCCACTG
ACGACAACACGGTCAAGGAGACCAACGCGAGGAGCGCCGGCAAAAGGCGT
TCTTCATCGTCCTCGCCATCTCCCGCGGCGGTGGCGGCGGCGGGCGTGGC
AGCGGCGGCAGGGGCGGAGGCGGCCGGGGCGACGGCTCTCTTAGCGGCAC
AGGCGAAGCTCGTCTCCGCTGCCGTGGCGTACGACAGGTGCGTGGCTGGC
GTCCGCGACTGCCTCGACAGGGGCTGCGCCGCGTTCCGTCTGGCTCGCAC
GTACTCCGAGCAGCAGAAAGCTTTCGAGGAGTCGACGGCTACGTTAGGCC
CCGCACAGCCCGCGCGAGCCGGCTACAAGGACTGGCGAGGGAGTCCCGTG
GTGGGGCTGCAGAGCGCCACGCTCGATGTCGTGGAGGCCATGGACGATTG
GGCGGCGGAGTGGGCGGTGGCCAAAGGTGGCAAAACGGATGCCGGGGGGG
GAGATAACGCGTTTGCAGAGGAAGGAGTCGTGCTAAAAGACGGCGCTGTG
GAGGAAGTCGCTGTCGCGGCGCCGCCGTTTCTGTGGGAAGGGTCGCCGTT
GGTGTCAACGGTCATCGGCCAAAGCGCCAAGCTTGTTGCCGGCGCGCCGG
AACTCAAGGAGTGGTACGGTCCCGGGTTCCCGATCGAGCGGAACCCTTTC
TTTCTCGCTTATCCGGTGGACGACCGACCCGTTACCCCACGCAGCGCTCT
CGTCCGGGCTTGGGTTAACGGGGAGGTAAGCGGTCGGATGGTGGTGGATA
CGAGCGTGTGCAACCAGGAATTCGTCGCTGAGTAA back to top
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