EsuBft1112_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1112_5a-0001 ID=EsuBft1112_5a-0001|Name=EsuBft1112_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2553bp|location=Sequence derived from alignment at Scaffold_189:26168..31721+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TATACGTAGCCCGTGGCGCGAGAAGACGGCAGCAAAGAAAGGAACTGAAG
CTGAGATACGGTGGGTACAGAGAGCCGTGGTCCGTAGTTCGCAATACAGG
CGAGGAACGGAGGGATAGCAGAATCCCTAGGCGCACGCTGTGGGCCCCCC
TGAGCGGCCGGCCCGCACAGCGGGCACAAGAACCAGCGAGAGCTAGCGAG
CGGGGGTGGGAGAGGAGAGATTAAGTGAGAAAAGAACCCGGTACCTTCGA
CAGCAGCGAGTGAGTTCACCATGACAAGCAACGTTGCGAAGAAAAGCGCC
AAGCCGCCCTCGAAAGCAAAGTCTGCAAGGTCGTCGCCTTCGCTGCTCAA
GGTAGTGGTACGGCGTCTTCCCCACCAGATGAAGGAGGAGGAGTTCGTCG
AGGCCCTGACAGCGGCGGCCTCTGACGCGGGGATGGGAGAGCGGGGGGGC
TCGTGGGACCTCATGTACTTCACGCCGGGCAAGATGAGCAAGAAGAGAGG
CAGGGTGACGGGGACGGCGTACCTCCACATCGACCGCGAGTGGGGGGCCA
ACGCCGACCTGAGCCTGTCCAAGCTGCGCGCCGCGGTTTCGGCCTCCGAC
GCCTTGACGCCGGCCGCGGAGCCTGCGTCCTCCTCCTCCAAGGAGGGAAG
CGGCGGCAAGCAGAGCGGGGGTGGCGTCGCGTCGACGACGGCGACCGCGG
GACCCACGGTTGAGACCGCCCCGTTTCAGAAGCTCTTCAAGCAGAAGCCC
AAGCGGGACGTTCGCGTGGGCACGATCGAGAAGGACGCGAGCTACAAGGC
CTTCTGCGCCGCGCTGCAGTCGCCGGCGCAGCCGCTGCCGAGCGCGGACG
TCCAGGCCGACATCAGGGAGTCCGAGGGGAAGGAGGAGCCCAAGCCGCAG
AACGCTCTCCTCGACTTCCTGCGCGAGAGGGGCGCGAGGAGGGTCAGGGA
TAGCCAGCGAGCGGCGGCGCTCGGCTCCTCCGCGAGTCGGGGTAGCGTCG
GCGGCGGCGGGAGTAGCAGCCGGAGGACCACGGGGGGGGTTGCCGCTGGG
TCGGCGACGGCGACGAGGACGGCGGCAAGGTCGACATCGGCAGCGACCGC
GAAAACGTCATCGGCTAAGAACGCGCCATCGTCTTCGCGGCCCCAGCCAC
CACCGCCGCCACCGGCCGCCGCTCCGCGAGGATGCCAAAAAGCAACAGCA
ACAACAACAACCGGGTCGGCGGGGGGAGTCAGCGTGATGTCGGCATCGTA
CAGGGCGGCGAAGGCGGCGGCGGCGGAGGCGGAGGCGGCCAAGGCGACCA
AGGCGGCGGCGCCAACGCTGGCGTCGACGCCGGCCACCAAACAACAGGAG
GCTCCGTCGGCAGCATCAAAGAGCCGTCCTGGCTCCGCGAGGGGCGGCGG
TAGCAAAACGGCGGGGAAGAGCAGCGCCTCGGCCGGGCCACCAACACCGC
GCATACTGTCAAGGGCGAAGGAGTCGGTGACGAAAGGTCAACCTCCGGCG
GCAGCGGAGGCGGCGACAGCGGCAGCCGCGACTTCCTGGGCTCAGGGTTC
GACAGGAACTACCAACCCATCCTCACGGAGCGGGGGCGGCAGCGGCGGCG
TCGACGGCGGGAGACGAGGGGGAGGAGGCAGCGGAAAAGGGCGAGCTGGT
GGGAAGTCTTCGTCTAGCAGCCATAGGTCGAAGAAGTAGTTGGGAGCAAT
GGTGGCAGTAGCAGCGGTGGTAGAACGTGAAGGGATTGGCCTCGGCCGCT
GTGCGTTGCGATCAAGGGGCAGGTCTCGCTCTCGGGAGGTTGCACTTTGC
GCAAGCAAGGTTTGGGTGTTTCCGTGTAGATCGGGACGGTCTTGTGGGTC
TGTCGGCCTGACTTTCTGTGTAAGATGTGCGAAAAGACTTGCTTGCTGAG
TTTCAATTCCATTCTCCCCATCGCCGAATCGGTTCATGAAGTCGTGCGAC
AGCAGTGGCAGCGACAGGTGCTTTGTGATGCGGCGTCTAGGAAGGGAACG
CTCGGTTTCACCTTCCCTGCCGTCCAATCGGTATCCCGGGGTCCGGCTTT
GTACTCGGCTGCCCTGAGGACGGCGGTGTTTTGAATGCTTGAGGCCGGCA
GACTTCAGGATATGCCTTAGGTCCCCACGTGCCGTCGGCATAGACTGCCG
TGGATTGCTCCGAACAGAGGGCCTCGTGGATATTCTGTTGGGTTGGCCGC
CAGGCAATGACGATACGTGTCTGCTTGCCCCCCCGTAGCGCATGACACTC
TCGAGACACCAATTTAGGCGACGAGAGCTCCAGGCGATGTGCTCGTGTCT
AGGGTTAGTATTATGTACAGGATCGAGGATGTAGTGCCTGAAACCACAGA
CTGGCTTTTTGTCAAGCAGGCTTACAGAGATGGGTCTGTGTCTTACAGAG
TTGGTACAGCGTCATGCAGCCTCACGATCATGTAGCAAGTTAGAGGAAGC
TCTTGCCCGCCAGGAACCTGTCACCGAATTGGGAAATTCCTTTCACGCCT
TCGGACCGTCAGATCGAATTAGTCGTCAACGAAGAGCAAAATGTTGCCTT
CGT
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protein sequence of EsuBft1112_5a-0001

>EsuBft1112_5 ID=EsuBft1112_5|Name=EsuBft1112_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=472bp
MTSNVAKKSAKPPSKAKSARSSPSLLKVVVRRLPHQMKEEEFVEALTAAA
SDAGMGERGGSWDLMYFTPGKMSKKRGRVTGTAYLHIDREWGANADLSLS
KLRAAVSASDALTPAAEPASSSSKEGSGGKQSGGGVASTTATAGPTVETA
PFQKLFKQKPKRDVRVGTIEKDASYKAFCAALQSPAQPLPSADVQADIRE
SEGKEEPKPQNALLDFLRERGARRVRDSQRAAALGSSASRGSVGGGGSSS
RRTTGGVAAGSATATRTAARSTSAATAKTSSAKNAPSSSRPQPPPPPPAA
APRGCQKATATTTTGSAGGVSVMSASYRAAKAAAAEAEAAKATKAAAPTL
ASTPATKQQEAPSAASKSRPGSARGGGSKTAGKSSASAGPPTPRILSRAK
ESVTKGQPPAAAEAATAAAATSWAQGSTGTTNPSSRSGGGSGGVDGGRRG
GGGSGKGRAGGKSSSSSHRSKK
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mRNA from alignment at Scaffold_189:26168..31721+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1112_5a-0001 ID=EsuBft1112_5a-0001|Name=EsuBft1112_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5554bp|location=Sequence derived from alignment at Scaffold_189:26168..31721+ (Ectocarpus subulatus male Bft15b)
TATACGTAGCCCGTGGCGCGAGAAGACGGCAGCAAAGAAAGGAACTGAAG
CTGAGATACGGTGGGTACAGAGAGCCGTGGTCCGTAGTTCGCAATACAGG
CGAGGAACGGAGGGATAGCAGAATCCCTAGGCGCACGCTGTGGGCCCCCC
TGAGCGGCCGGCCCGCACAGCGGGCACAAGAACCAGCGAGAGCTAGCGAG
CGGGGGTGGGAGAGGAGAGATTAAGTGAGAAAAGAACCCGGTACCTTCGA
CAGCAGCGAGTGAGTTCACCATGACAAGCAACGTTGCGAAGAAAAGCGCC
AAGCCGCCCTCGAAAGCAAAGTCTGCAAGGTCGTCGCCTTCGCTGCTCAA
GGTTGGTCTGTTCAAGCGAAGATTCTGGCGTATGTAGCATCAGGCCGGTA
AATACACCAATGGCGTTATCCACAAAGCAACAAGAAATGATATGCAGTTG
CCTTTTACGACGTGCTGATATTTTGTACCTGCTCACCATCCTACGTCCTA
CATGATGAAGCTGTACGATTACTTGTGCCGTTGTATCGATGTACCGCCGT
ATCCGATCTCCGAAGATCGCTCACATTCGATTCGTCGTTTCCAACGAAAC
ACATTCTTATCCTCACCAGCCCAGCGAAGGCACTTTCTTATTTGTAGAAA
ATAACCATAGACTAACCTCACAGAAAGACTAGCCGTTCGAGATTTGACCT
CAGTCGAAAGGGATGTGTTGAAGTATTTTCAGTAAGTGGATTGAAACCGA
GGGAAACTGGGCTTATTTTGAATTTGTGTAAGCCTATACACTGAGTGCAC
TACTCTTTAATGGTCTTTACTCAAAGGTAGATAATTTAATCGTATTCCTC
GGCGCGGGTCACTTCTTTCACCTTGGGTTCCGGTGACCGTTCTGCTGCTG
TAAGACATCAACAACAAGTCCGCGGAACAACTGGTAAACGCGCTATGTAT
GGCCAATAGGCCGGCAGAAGAGAACATAGCCAGGCCAGGCCAGTTGTCTG
GGTAAGGCGGTGCAATGTGCAGTTGACACATGTGACATATTTGAATGTGA
CACTCGGCCTTGGTTCCTTACTTGGCTTCGAAGTGATACTTCATAATGTA
GGTAACTGCGTCCCCCCTCGTAAAGTTGTCGGGATCTGTGTACGTACGTA
TTTCTATGAAACGCCGCGATCAGATTTTGAAGTCCAAGTCCCTATTTTTT
TTTTGTGTGTCCCACGTGAACGACGTGTCAGGCCGCGCCCCTCAGCTTCA
GCTGTGTTGCTGCCAACTGCCAACTAAATGACACATGGCAAACTTCTCGT
CGCATACTTTGTGCTGTTCACCGGCTGCCGCTAGTCTCTGTCGTTCGAGC
ACTCCTCAGAGAGGCCAGAGTGTTAGCTCTCCCGCTGAACCCCTCCCACC
ACCTTGCTCCTGCCGTCCACGCCCCCAGCTTCGTGTTCCATAAGATCTCT
TCCCGCCAGCGCCGGCTACCCTCGTCTCCAAATTGAGTGGATCAAGTGCC
CCTCTGACCCCGCCCCCCCCCCTCCCTCCCACACCTAGACACTAGGATTA
AGAGGTGTGTTCTCTTGAATGTGATTGTACCTGAGCTAGAGTATGCAGGA
GAGGTATGGGAAGGTAACGAAAAGGCCGTCAAGCAGCTGGAAACGGTGCA
GATGGCAGCGGCCAAGAAAATACTAGGATGTTCAAGTACAACGAGCAACA
CTGTATTGAGAGCAGAACTGGGAATGTACTCTCTTAAAATAAAGAGAGAC
ATGCAAAAGTTGAATTGGCAGATAGACTACCAGCCATGGTTGACAAGGCA
GCTTGGGGAAAAGCGACTCCAGGGAAGAAAGGAATCAGATGGGACAAGGT
GGTAGAGAGGGTTTGGAAGGAGATAGGAGACGAGGAGGAGACATTGGACA
CGGAAGGGTTCGGGGGGTTCAAGAAGAAAGTCAAGGAGATGCTAGAAAGT
AGGGAGGAGGCAACCCTTCGGAAGAAGGTACGAAGCGAAGACCACTTGGA
GATATACGGGAAGTTGAAAGAAGGGATAGGGATGAAGAGTTACTTGGACG
GCCCCATGGACTACGCAAAAAAACTGAAGTTGCAATTTCGAGTAGGCGAT
CTGGACTTGCCAGAACGAAGGAAGAGGTACAGCAGCCGTAGGAGAGAGGA
AGAGGAGGATAGACAGACATGTCCATGTGGCAAATCGGAGGAGAGTAGAC
CCCACATAGTTGGGGAGTGTGAGCTGTACAGGAAGGAAAGAGAGGATCTC
GAGGAGGACATGAGACAGAGAGGGTGTGACATGGACAAGTTTGGTAAATT
AGACAACAGCGAAAAAACGATCGCGGTAATTGGGAATAGATGGTGGGCAC
AAGAGGCCGTAGAGGGCGGGGATAAGATGTGCAAGAAAATTTTATGTAGT
TTGTGGCAAAAACGTAAAGAGCTCCCAAATGTTGGTGGTGTCTCTAGTAG
GGGTAGGAACGGTGCCTCGTCTCGAAAGGGACGCGTAGTCAATGGTTAAA
TGACTACGGCAAGCAACAAATGAGTACGCCCCCCGCCCCCCGCCCCCCTC
CCTCCCTCCTCTTGAGGGTAATGATCTAACCGCTAAGGCATACAGAACAT
TAGTACGACCCCCCCGCGCCGGCAACCCTTGTCTCCAAATTGAGCAGATC
AAGTGCCCCTGATCCCCCCCCCTCCCCCCCCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCCCCCCCGGCGCGCCCATTGATTTTTCGG
AACCAACAGGTAGTGGTACGGCGTCTTCCCCACCAGATGAAGGAGGAGGA
GTTCGTCGAGGCCCTGACAGCGGCGGCCTCTGACGCGGGGATGGGAGAGC
GGGGGGGCTCGTGGGACCTCATGTACTTCACGCCGGGCAAGATGAGCAAG
AAGAGAGGCAGGGTGAGCAAGGGGATTTCTCCGTCTCGTTTGAGGCTCTC
GACCTACAAGTACGTTTGGGCTGCTCTCACTGATCTGTTGTTCAGCGAAG
AAGAAATCTCGCTCAACGTGAGGGAGCTGTTTACACGCCCGAGACCCTAG
CACGGAACGAACACCGGGGTGATTGCATCCTTTTGCATTTTCTATTTTCC
AGCTTCGGTGCGACGACCCCTTTGCTACTTGACTTGTGGCACCGCTTAGA
CTGCAGCCTTTGTTTCACTGGACTCTTCTGTGTTTTGCGTGCGTGACTCC
GCCCTGTTATTTGGAATCGAGTCGGGTGTGCCATCGCGGTCATGGCACCC
GAAACCTCGGAGAAAAAACACGCTCTTACCGATCATCGTGACCCATCTCT
AGTATGCATACGCGCGCGCCGATGTACAGGTGACGGGGACGGCGTACCTC
CACATCGACCGCGAGTGGGGGGCCAACGCCGACCTGAGCCTGTCCAAGCT
GCGCGCCGCGGTTTCGGCCTCCGACGCCTTGACGCCGGCCGCGGAGCCTG
CGTCCTCCTCCTCCAAGGAGGGAAGCGGCGGCAAGCAGAGCGGGGGTGGC
GTCGCGTCGACGACGGCGACCGCGGGACCCACGGTTGAGACCGCCCCGTT
TCAGAAGGTAAGGAGGAGGCGTTGTTTGTTGTGGTTCTCTTGTCTCGGCT
GTCTGTGTTGCTATGTTTTGTCTCTCGAGCTGGTGATTGACAACACCTCT
CTAACCCTGCCTCACGCCATGCCCAACACCGCCTGGCCTCACCTTTCGAA
CCGAACCCGCGACCCGTCGCCCGTTCAAAACAGCTCTTCAAGCAGAAGCC
CAAGCGGGACGTTCGCGTGGGCACGATCGAGAAGGACGCGAGCTACAAGG
CCTTCTGCGCCGCGCTGCAGTCGCCGGCGCAGCCGCTGCCGAGCGCGGAC
GTCCAGGCCGACATCAGGGAGTCCGAGGGGAAGGAGGAGCCCAAGCCGCA
GAACGCTCTCCTCGACTTCCTGCGCGAGAGGGGCGCGAGGAGGGTCAGGG
ATAGCCAGCGAGCGGCGGCGCTCGGCTCCTCCGCGAGTCGGGGTAGCGTC
GGCGGCGGCGGGAGTAGCAGCCGGAGGACCACGGGGGGGGTTGCCGCTGG
GTCGGCGACGGCGACGAGGACGGCGGCAAGGTCGACATCGGCAGCGACCG
CGAAAACGTCATCGGCTAAGAACGCGCCATCGTCTTCGCGGCCCCAGCCA
CCACCGCCGCCACCGGCCGCCGCTCCGCGAGGATGCCAAAAAGCAACAGC
AACAACAACAACCGGGTCGGCGGGGGGAGTCAGCGTGATGTCGGCATCGT
ACAGGGCGGCGAAGGCGGCGGCGGCGGAGGCGGAGGCGGCCAAGGCGACC
AAGGCGGCGGCGCCAACGCTGGCGTCGACGCCGGCCACCAAACAACAGGA
GGCTCCGTCGGCAGCATCAAAGAGCCGTCCTGGCTCCGCGAGGGGCGGCG
GTAGCAAAACGGCGGGGAAGAGCAGCGCCTCGGCCGGGCCACCAACACCG
CGCATACTGTCAAGGGCGAAGGAGTCGGTGACGAAAGGTCAACCTCCGGC
GGCAGCGGAGGCGGCGACAGCGGCAGCCGCGACTTCCTGGGCTCAGGGTT
CGACAGGAACTACCAACCCATCCTCACGGAGCGGGGGCGGCAGCGGCGGC
GTCGACGGCGGGAGACGAGGGGGAGGAGGCAGCGGAAAAGGGCGAGCTGG
TGGGAAGTCTTCGTCTAGCAGCCATAGGTCGAAGAAGTAGTTGGGAGCAA
TGGTGGCAGTAGCAGCGGTGGTAGAACGTGAAGGGATTGGCCTCGGCCGC
TGTGCGTTGCGATCAAGGGGCAGGTCTCGCTCTCGGGAGGTTGCACTTTG
CGCAAGCAAGGTTTGGGTGTTTCCGTGTAGATCGGGACGGTCTTGTGGGT
CTGTCGGCCTGACTTTCTGTGTAAGATGTGCGAAAAGACTTGCTTGCTGA
GTTTCAATTCCATTCTCCCCATCGCCGAATCGGTTCATGAAGTCGTGCGA
CAGCAGTGGCAGCGACAGGTGCTTTGTGATGCGGCGTCTAGGAAGGGAAC
GCTCGGTTTCACCTTCCCTGCCGTCCAATCGGTATCCCGGGGTCCGGCTT
TGTACTCGGCTGCCCTGAGGACGGCGGTGTTTTGAATGCTTGAGGCCGGC
AGACTTCAGGATATGCCTTAGGTCCCCACGTGCCGTCGGCATAGACTGCC
GTGGATTGCTCCGAACAGAGGGCCTCGTGGATATTCTGTTGGGTTGGCCG
CCAGGCAATGACGATACGTGTCTGCTTGCCCCCCCGTAGCGCATGACACT
CTCGAGACACCAATTTAGGCGACGAGAGCTCCAGGCGATGTGCTCGTGTC
TAGGGTTAGTATTATGTACAGGATCGAGGATGTAGTGCCTGAAACCACAG
ACTGGCTTTTTGTCAAGCAGGCTTACAGAGATGGGTCTGTGTCTTACAGA
GTTGGTACAGCGTCATGCAGCCTCACGATCATGTAGCAAGTTAGAGGAAG
CTCTTGCCCGCCAGGAACCTGTCACCGAATTGGGAAATTCCTTTCACGCC
TTCGGACCGTCAGATCGAATTAGTCGTCAACGAAGAGCAAAATGTTGCCT
TCGT
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Coding sequence (CDS) from alignment at Scaffold_189:26168..31721+

>EsuBft1112_5a-0001 ID=EsuBft1112_5a-0001|Name=EsuBft1112_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1419bp|location=Sequence derived from alignment at Scaffold_189:26168..31721+ (Ectocarpus subulatus male Bft15b)
ATGACAAGCAACGTTGCGAAGAAAAGCGCCAAGCCGCCCTCGAAAGCAAA
GTCTGCAAGGTCGTCGCCTTCGCTGCTCAAGGTAGTGGTACGGCGTCTTC
CCCACCAGATGAAGGAGGAGGAGTTCGTCGAGGCCCTGACAGCGGCGGCC
TCTGACGCGGGGATGGGAGAGCGGGGGGGCTCGTGGGACCTCATGTACTT
CACGCCGGGCAAGATGAGCAAGAAGAGAGGCAGGGTGACGGGGACGGCGT
ACCTCCACATCGACCGCGAGTGGGGGGCCAACGCCGACCTGAGCCTGTCC
AAGCTGCGCGCCGCGGTTTCGGCCTCCGACGCCTTGACGCCGGCCGCGGA
GCCTGCGTCCTCCTCCTCCAAGGAGGGAAGCGGCGGCAAGCAGAGCGGGG
GTGGCGTCGCGTCGACGACGGCGACCGCGGGACCCACGGTTGAGACCGCC
CCGTTTCAGAAGCTCTTCAAGCAGAAGCCCAAGCGGGACGTTCGCGTGGG
CACGATCGAGAAGGACGCGAGCTACAAGGCCTTCTGCGCCGCGCTGCAGT
CGCCGGCGCAGCCGCTGCCGAGCGCGGACGTCCAGGCCGACATCAGGGAG
TCCGAGGGGAAGGAGGAGCCCAAGCCGCAGAACGCTCTCCTCGACTTCCT
GCGCGAGAGGGGCGCGAGGAGGGTCAGGGATAGCCAGCGAGCGGCGGCGC
TCGGCTCCTCCGCGAGTCGGGGTAGCGTCGGCGGCGGCGGGAGTAGCAGC
CGGAGGACCACGGGGGGGGTTGCCGCTGGGTCGGCGACGGCGACGAGGAC
GGCGGCAAGGTCGACATCGGCAGCGACCGCGAAAACGTCATCGGCTAAGA
ACGCGCCATCGTCTTCGCGGCCCCAGCCACCACCGCCGCCACCGGCCGCC
GCTCCGCGAGGATGCCAAAAAGCAACAGCAACAACAACAACCGGGTCGGC
GGGGGGAGTCAGCGTGATGTCGGCATCGTACAGGGCGGCGAAGGCGGCGG
CGGCGGAGGCGGAGGCGGCCAAGGCGACCAAGGCGGCGGCGCCAACGCTG
GCGTCGACGCCGGCCACCAAACAACAGGAGGCTCCGTCGGCAGCATCAAA
GAGCCGTCCTGGCTCCGCGAGGGGCGGCGGTAGCAAAACGGCGGGGAAGA
GCAGCGCCTCGGCCGGGCCACCAACACCGCGCATACTGTCAAGGGCGAAG
GAGTCGGTGACGAAAGGTCAACCTCCGGCGGCAGCGGAGGCGGCGACAGC
GGCAGCCGCGACTTCCTGGGCTCAGGGTTCGACAGGAACTACCAACCCAT
CCTCACGGAGCGGGGGCGGCAGCGGCGGCGTCGACGGCGGGAGACGAGGG
GGAGGAGGCAGCGGAAAAGGGCGAGCTGGTGGGAAGTCTTCGTCTAGCAG
CCATAGGTCGAAGAAGTAG
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