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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7FLM0 |
| ProteomeId | EsuBft105_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 230 |
| Hectar predicted targeting category | other localisation |
| Evalue | 0.0 |
| EggNOG OGs | 2C9U0@1|root,2S6CS@2759|Eukaryota |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-17_000630.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft105_8a-0001 ID=EsuBft105_8a-0001|Name=EsuBft105_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2304bp|location=Sequence derived from alignment at Scaffold_100:599457..604189- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCTCGCCGCTTGAACTCCACACGGCGCAGTGGTAGACAGGAGCAGCA GCAGCCGGAGGAGCAGCAAGGGCCGTTGCAAGGCCGGGTCGAGGAAAACG GTACTCTCGAACCGATGGATGGATTCTCTGAATACGAGATAGAGCGGCGG CGCACGATGGAGCGGAACCACCGCAGGCTGCAAGAACTCGGCCTGGTGGG GAGAGAAACGGTTGTAATGGTGAGACCCATCGCGAAGCCACCAAGGAGGG GCTCGGGAGCAGCGTCGGCGTCAGGAGCAGCTGCAGCAACTGTTGGTGTG CGAAAGTCCTTGCGTACGCGAAATAAACCTGCCCCCGTCTACACGGAACA TGCCGTTGGTTTCAACGATGAAGGCGATCGTGGACAAAAGCGACGGAGGC TTTCGCCCGTGAAGGGGCGGCAGGGGTGGGAACAGGCCTCGCTGTCTACT CCGACTGCTGTTCCTCCTACGCCCGCCCGTCGAAGTGCCCCAAAGCCCTT GCCTCCGAATAGCAGCAGGAATCTGGAGTGCAATATCCCGATGCTAATGG AGCGATATCTAGGTAGACAATTCCCTTCTTTCGGCAAAGCCCCTGTCATG GAGCTGTCTACCAAGACGTGCCCTCCGAAATTCAGCAGAATGTCTGGCGT AACGGAGTGGAAAAACGCCGTGTTTCTCTGGGTGAACGTGGACGGGGCAA CAGGCTACACGAACCTCTTCGAAGCGGATAAGTTGCCGGAGGCGGCAGAC GATGCCGAGAGCACAAAGAACGGCGGTGACATCGCCGATAAGAGCCGGCG AGAAGTGCCGGCGACGGGCAGCAAGAAACCGGTGATCGGAGGGGTTGCCG ACAATCAATTACAGCGCGATCAGAAGGCAACGGCCACTGTTGGCGCTGCA ACCGCTGCAGCCTGTCGGCGCCCCACATCGCCGCGATCGGTGAAAGCGCC GTCCATACGAGGCGGTAGCGGTATCATGGCTGGAAATGATGACACCGCTG CTGTCGGCAATTTTGCTGGTGATGGCGGGCGTGATGATGTGGTCTGGGGT GATTGTGGTGGTGCCACTTGCGGCCGATCCACGGGGCTCAGGATGACGTG GTTCGCTGGAGGGCGCATGACGGCAGAGTCGGCCCTCATCCAAAGATTGC TGGCCGGAGGAGACCCACCGGAGACTGAGGATCAGCCGAGCAAGGCAGTC GACGCTGACGCTAGTTCTGAAACGACGATGTCGACGAGGGCACCAGCAGC ATGTGGTCGAGATTTGGAGCAAAATGGACACGACTCTGGTTCAGCAGTAG CAATGCCAGTCATAAGCGAAGCAGAGGGCGAAATGAACATCGGCACTGCG CACGCACCGTGTCCAAATCCACAAGCCGACGTCGAAGGCTTCGAAGCGAA ATCAGCTGAAACCACCGCCGCAGTGGCCGAACATGGTGCACTCCAGGGGG CGATCTTGCGGGCTTCGGCATCTTCCGGTGATGGTGTGGAAGGCGGTGGC GGGAAAAGTTGCGACGTGGTGCTTCTATTTTGCCGACTCCCGAACGAGCC GTACGTGTTCTGCGGACGGCTGGGATATTCGAAGCACTGGGCCGGTGAGC GGCCAGTTCGATTCGTTTGGCGGCTGATAGATGCCGCGGGGTTGACGAAG CAGCCTGACTTCAAAGCCATTTTGGAGGCGGCAGGCATTGGAAGTGCCGA CCCGTCGTAGAACCTTAAATGATTAAAGTACGGTGAATGTTATAGCGGAA CCCTTCGCGACCATCACTGGAAACGGCGAAGGCAGGGTTGTCCCTGCTGC CATTTGTTGTTCGCCACGTGTGTCCTTCTGCGATACTGCCTCGGAACGTA CATCGTTGTATGTACGTTAACCAGCTCCGAACGACCAGCATCTGGATGTT TGCTGTTCGAGCCGCACTTTAGTCAAAGAGATATAGATACGGGCCTCGGT AGATAGGCATTGTTTCGTATGTGTCCTGATTTTGCCAACTAGGTGGCTCA AGTTGTTCGGGTAGAGTTCGTCCTCGTACGTATGGTCATGATGGTCATGG GGCGTGCCCAAGAGGTGGGGGGAATTGGTATCTGTGTTAATTGTCAACAC GGTGTGTAATACGAAGTCCCGGGCATAGGAACTCATTCAAGCTTGACGGC AGACACGTGAACCTTTGAGGCGGCTTTTGGTACGTGGACATGATTACTGG TACTATCAAACGCGTCTGATTAGAGCATCCCGCTGTCGTTGAGTACTTCG ACGCTCCTTTGCCGTTGAATCTAAGGTCACCGGGAAGGCGCAAGCACCAG TGCT back to topprotein sequence of EsuBft105_8a-0001 >EsuBft105_8 ID=EsuBft105_8|Name=EsuBft105_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=569bp
MSRRLNSTRRSGRQEQQQPEEQQGPLQGRVEENGTLEPMDGFSEYEIERR RTMERNHRRLQELGLVGRETVVMVRPIAKPPRRGSGAASASGAAAATVGV RKSLRTRNKPAPVYTEHAVGFNDEGDRGQKRRRLSPVKGRQGWEQASLST PTAVPPTPARRSAPKPLPPNSSRNLECNIPMLMERYLGRQFPSFGKAPVM ELSTKTCPPKFSRMSGVTEWKNAVFLWVNVDGATGYTNLFEADKLPEAAD DAESTKNGGDIADKSRREVPATGSKKPVIGGVADNQLQRDQKATATVGAA TAAACRRPTSPRSVKAPSIRGGSGIMAGNDDTAAVGNFAGDGGRDDVVWG DCGGATCGRSTGLRMTWFAGGRMTAESALIQRLLAGGDPPETEDQPSKAV DADASSETTMSTRAPAACGRDLEQNGHDSGSAVAMPVISEAEGEMNIGTA HAPCPNPQADVEGFEAKSAETTAAVAEHGALQGAILRASASSGDGVEGGG GKSCDVVLLFCRLPNEPYVFCGRLGYSKHWAGERPVRFVWRLIDAAGLTK QPDFKAILEAAGIGSADPS back to topmRNA from alignment at Scaffold_100:599457..604189- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft105_8a-0001 ID=EsuBft105_8a-0001|Name=EsuBft105_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4733bp|location=Sequence derived from alignment at Scaffold_100:599457..604189- (Ectocarpus subulatus male Bft15b) ATGTCTCGCCGCTTGAACTCCACACGGCGCAGTGGTAGACAGGAGCAGCA
GCAGCCGGAGGAGCAGCAAGGGCCGTTGCAAGGCCGGGTCGAGGAAAACG
GTACTCTCGAACCGATGGATGGATTCTCTGAATACGAGATAGAGGTGAGG
CTGAAGCACAGTTCAACTCGCCAGTTCGATTTCTTCCTGCTGATACATGT
GACCCGGTTGGGTCGTCTATTTAGCTGGTATTTAGAAGTGGAGGATAGGG
GCCAGAGGGGCAGACGACAGAGTCCAATGATGCAAAAAAAAAAAAAATGT
ATCGCAATGGTTGTACAGCAGTACAGCTGTACAGCATACAGCATTCGCAG
CATACGGCCGGCGTGCTTGCATGTGTGACACAAAGATGTCACATCCCCTG
CACCAGTTTCTAAAGCTCGATTACTTCACAACGAGGGGGATATACTCAAG
CAAGATGAAACGAACCGATTTCGGCACCGCCAGTCTCTGTGCTGCGGAGA
AAACCACGCTTGATGTTCGGTCAAGGGGGGTGTGGTATCTCGTGTCACGT
TCGATCGTACGGTATTCTCTTGGTTCGCGTCAAGCTTTTCCTTCGAAGAT
TCACCTGTGCCGAGTGTTGCTCTCGCGTTGACTGCTGATTTATTCAGGCA
GTGGCAGATGTTGTTCTGTGTCGCATGAGAGTCTTGATGAACACCTTGAG
GGAGCCGACGGGTGAGGAGGGTTGTACTCTTGTGTATGTCTTGGACCGAT
AGTCCCTTCAGGCACGCAGGACTTACCTTCGATGATGCGAATCGTTTGAG
AACCCCACTGCTGTTGTGTGTCACGAACCCCAGCGGCGGCGCACGATGGA
GCGGAACCACCGCAGGCTGCAAGAACTCGGCCTGGTGGGGAGAGAAACGG
TGCGTAGGTTTGGTGCTGTGTTCTCTCATTATCTCTGTAGAACAAGCGGC
AGACCTCCATCGACTACTTGCCCTGCGTGAAGGTGTCAGTACGTGTAATG
CCATTTTTGTGGGGTCGATTACAAGCCCTTGAAGCGAAACTGGCGATTGC
CCGCTTGGGCAGAAAGCGTTGTCGAGAGAGTTGGTGTGCGAACCGCAAGC
CCTTGAAATACACGCCCTGAGACTCCTTTGAACGTGTTGTGCCTATCAAC
CCTGTGCAGGTTGTAATGGTGAGACCCATCGCGAAGCCACCAAGGAGGGG
CTCGGGAGCAGCGTCGGCGTCAGGAGCAGCTGCAGCAACTGTTGGTGTGC
GAAAGTCCTTGCGTACGCGAAATAAACCTGCCCCCGTCTACACGGTGAGT
ATCCCACGCCGACTCTACTTCGTTTCCGCATACCGTGTGCCGTTGATGGT
CCGTGCACGTCGTCCTGGCGAGAATATGGTTTACACATGCCGCGTGTTTG
CTGTGCCTTCCCTTGCGTAGCTTTTTTCTGCCTTCAAGCTGGGGTACCAG
CTCCCGAGCTCCCGCGTTGTGTAATTTTGTGGAATCCCCAGTCGCCACAT
TCACTGGCACTGTATGCCACTGTGTACAAAGAGACGGCATCCCAAAGCGG
CTACCCACGGAGGCCGGGAGCAGACCACGATGTACGAGCAGCTCTGACTG
GTGCTGTCCTTGTCAAGAGTAGGGGTGCCCTTTCATCCCCTAATGTTCCG
CCTGAAACTTGCAGCAGCGAACTGAATAGCACGTTTCGAATTCTTCGACT
GTCACCATCTCCACCAGTAGATGTGCCATCATTGTATCTGTCGTTTCAAC
AGATTTCTACAACGCACTGTCCCCGTTACGCCATCTTGGTGTTGTTCCAT
TCGTCCACATCCATTCATGGCACACCCTTGCTTCCCCGCTGCTTCCTGCC
GGTTTGGTCGTTTGCGAATTTTCGCAGGAACATGCCGTTGGTTTCAACGA
TGAAGGCGATCGTGGACAAAAGCGACGGAGGCTTTCGCCCGTGAAGGGGC
GGCAGGGGTGGGAACAGGCCTCGCTGTCTACTCCGACTGCTGTTCCTCCT
ACGCCCGCCCGTCGAAGTGCCCCAAAGCCCTTGCCTCCGAATAGCAGCAG
GTACTTCTTACTCTCGGCTTAGATATCCAGAAACCGCTAGAGCGCTATAC
ACGGTGCTGTGTAGCTGGATTGTCGCGTTTGGTGCGTGGGGGTATTGCTT
CTGCAACACTCGCGACTCAAGAGACAGCGTTAGACTCTACCGCGGTCTGT
TCTGTCACGGTTTTGGTTTTTCTGTTCTGGAATGAATTTGACCTCTGTCA
AGGGGGGCGAGTTGGGCGTTTGAAAATGTACCCCGAATGGGAGTTGTCAC
ATATTTGCCGCCCTTGAGAATTACGCGTGAGAGCTCAGGCGCGCTGGTAG
TTCCCTGCACAGTAAGAATCTTGCCTCCTGTTGCGGGGTGCCTTCCTGAT
AGCGTACTGGGAATTTCGGTGTCACTTGGTAGGAGCCTAGATTCGCGAAC
CCTGTGTGCGGATTGAGAACTCATGCACCACTAACCCCAAATTTCTTCTC
CCTATGTTTGGGCTTGGTAACATTCGTTCCCCCGTAAACTCCAGTTAGTG
ACGTATTGGTCAGCAATGTTGACTGTTGTGGAGGGCACACCATGTTATCG
TCTTCTATGATCGAGACTTTTCCCGCCCTCTTTTGTTGTTCTCCTCTGCA
GGAATCTGGAGTGCAATATCCCGATGCTAATGGAGCGATATCTAGGTAGA
CAATTCCCTTCTTTCGGCAAAGCCCCTGTCATGGAGCTGTCTACCAAGAC
GTGCCCTCCGAAATTCAGCAGGTGAGGCGGTTTCCGGTGCCGATAGTCGA
AACGGAGTATGCCTGTGAGGTAAGTAACATTATTGTTTTATCTCAACCAA
CTGGCGGTAGTGCACAAGCGAACAATTCGTAGCGCTATGCACACGCAAAC
GCACGCGGTATTTTCTCTTGCCAGGCGACGCATATATCTTCCTTGCCAGT
TTCGAGTTTCGGACGACCCTTCGTGTTGATCAGATGGTGGCAATATTTCG
AGGCAGCACCGTCCTCACGCCCCCTTGTTCTTACTCCCGGTCTTCCCGTG
AATTCTCCTGCCTCCAGAATGTCTGGCGTAACGGAGTGGAAAAACGCCGT
GTTTCTCTGGGTGAACGTGGACGGGGCAACAGGCTACACGAACCTCTTCG
AAGCGGATAAGTTGCCGGAGGCGGCAGACGATGCCGAGAGCACAAAGAAC
GGCGGTGACATCGCCGATAAGAGCCGGCGAGAAGTGCCGGCGACGGGCAG
CAAGAAACCGGTGATCGGAGGGGTTGCCGACAATCAATTACAGCGCGATC
AGAAGGCAACGGCCACTGTTGGCGCTGCAACCGCTGCAGCCTGTCGGCGC
CCCACATCGCCGCGATCGGTGAAAGCGCCGTCCATACGAGGCGGTAGCGG
TATCATGGCTGGAAATGATGACACCGCTGCTGTCGGCAATTTTGCTGGTG
ATGGCGGGCGTGATGATGTGGTCTGGGGTGATTGTGGTGGTGCCACTTGC
GGCCGATCCACGGGGCTCAGGATGACGTGGTTCGCTGGAGGGCGCATGAC
GGCAGAGTCGGCCCTCATCCAAAGATTGCTGGCCGGAGGAGACCCACCGG
AGACTGAGGATCAGCCGAGCAAGGCAGTCGACGCTGACGCTAGTTCTGAA
ACGACGATGTCGACGAGGGCACCAGCAGCATGTGGTCGAGATTTGGAGCA
AAATGGACACGACTCTGGTTCAGCAGTAGCAATGCCAGTCATAAGCGAAG
CAGAGGGCGAAATGAACATCGGCACTGCGCACGCACCGTGTCCAAATCCA
CAAGCCGACGTCGAAGGCTTCGAAGCGAAATCAGCTGAAACCACCGCCGC
AGTGGCCGAACATGGTGCACTCCAGGGGGCGATCTTGCGGGCTTCGGCAT
CTTCCGGTGATGGTGTGGAAGGCGGTGGCGGGAAAAGTTGCGACGTGGTG
CTTCTATTTTGCCGACTCCCGAACGAGCCGTACGTGTTCTGCGGACGGCT
GGGATATTCGAAGCACTGGGCCGGTGAGCGGCCAGTTCGATTCGTTTGGC
GGCTGATAGATGCCGCGGGGTTGACGAAGCAGCCTGACTTCAAAGCCATT
TTGGAGGCGGCAGGCATTGGAAGTGCCGACCCGTCGTAGAACCTTAAATG
ATTAAAGTACGGTGAATGTTATAGCGGAACCCTTCGCGACCATCACTGGA
AACGGCGAAGGCAGGGTTGTCCCTGCTGCCATTTGTTGTTCGCCACGTGT
GTCCTTCTGCGATACTGCCTCGGAACGTACATCGTTGTATGTACGTTAAC
CAGCTCCGAACGACCAGCATCTGGATGTTTGCTGTTCGAGCCGCACTTTA
GTCAAAGAGATATAGATACGGGCCTCGGTAGATAGGCATTGTTTCGTATG
TGTCCTGATTTTGCCAACTAGGTGGCTCAAGTTGTTCGGGTAGAGTTCGT
CCTCGTACGTATGGTCATGATGGTCATGGGGCGTGCCCAAGAGGTGGGGG
GAATTGGTATCTGTGTTAATTGTCAACACGGTGTGTAATACGAAGTCCCG
GGCATAGGAACTCATTCAAGCTTGACGGCAGACACGTGAACCTTTGAGGC
GGCTTTTGGTACGTGGACATGATTACTGGTACTATCAAACGCGTCTGATT
AGAGCATCCCGCTGTCGTTGAGTACTTCGACGCTCCTTTGCCGTTGAATC
TAAGGTCACCGGGAAGGCGCAAGCACCAGTGCT back to topCoding sequence (CDS) from alignment at Scaffold_100:599457..604189- >EsuBft105_8a-0001 ID=EsuBft105_8a-0001|Name=EsuBft105_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1710bp|location=Sequence derived from alignment at Scaffold_100:599457..604189- (Ectocarpus subulatus male Bft15b) ATGTCTCGCCGCTTGAACTCCACACGGCGCAGTGGTAGACAGGAGCAGCA GCAGCCGGAGGAGCAGCAAGGGCCGTTGCAAGGCCGGGTCGAGGAAAACG GTACTCTCGAACCGATGGATGGATTCTCTGAATACGAGATAGAGCGGCGG CGCACGATGGAGCGGAACCACCGCAGGCTGCAAGAACTCGGCCTGGTGGG GAGAGAAACGGTTGTAATGGTGAGACCCATCGCGAAGCCACCAAGGAGGG GCTCGGGAGCAGCGTCGGCGTCAGGAGCAGCTGCAGCAACTGTTGGTGTG CGAAAGTCCTTGCGTACGCGAAATAAACCTGCCCCCGTCTACACGGAACA TGCCGTTGGTTTCAACGATGAAGGCGATCGTGGACAAAAGCGACGGAGGC TTTCGCCCGTGAAGGGGCGGCAGGGGTGGGAACAGGCCTCGCTGTCTACT CCGACTGCTGTTCCTCCTACGCCCGCCCGTCGAAGTGCCCCAAAGCCCTT GCCTCCGAATAGCAGCAGGAATCTGGAGTGCAATATCCCGATGCTAATGG AGCGATATCTAGGTAGACAATTCCCTTCTTTCGGCAAAGCCCCTGTCATG GAGCTGTCTACCAAGACGTGCCCTCCGAAATTCAGCAGAATGTCTGGCGT AACGGAGTGGAAAAACGCCGTGTTTCTCTGGGTGAACGTGGACGGGGCAA CAGGCTACACGAACCTCTTCGAAGCGGATAAGTTGCCGGAGGCGGCAGAC GATGCCGAGAGCACAAAGAACGGCGGTGACATCGCCGATAAGAGCCGGCG AGAAGTGCCGGCGACGGGCAGCAAGAAACCGGTGATCGGAGGGGTTGCCG ACAATCAATTACAGCGCGATCAGAAGGCAACGGCCACTGTTGGCGCTGCA ACCGCTGCAGCCTGTCGGCGCCCCACATCGCCGCGATCGGTGAAAGCGCC GTCCATACGAGGCGGTAGCGGTATCATGGCTGGAAATGATGACACCGCTG CTGTCGGCAATTTTGCTGGTGATGGCGGGCGTGATGATGTGGTCTGGGGT GATTGTGGTGGTGCCACTTGCGGCCGATCCACGGGGCTCAGGATGACGTG GTTCGCTGGAGGGCGCATGACGGCAGAGTCGGCCCTCATCCAAAGATTGC TGGCCGGAGGAGACCCACCGGAGACTGAGGATCAGCCGAGCAAGGCAGTC GACGCTGACGCTAGTTCTGAAACGACGATGTCGACGAGGGCACCAGCAGC ATGTGGTCGAGATTTGGAGCAAAATGGACACGACTCTGGTTCAGCAGTAG CAATGCCAGTCATAAGCGAAGCAGAGGGCGAAATGAACATCGGCACTGCG CACGCACCGTGTCCAAATCCACAAGCCGACGTCGAAGGCTTCGAAGCGAA ATCAGCTGAAACCACCGCCGCAGTGGCCGAACATGGTGCACTCCAGGGGG CGATCTTGCGGGCTTCGGCATCTTCCGGTGATGGTGTGGAAGGCGGTGGC GGGAAAAGTTGCGACGTGGTGCTTCTATTTTGCCGACTCCCGAACGAGCC GTACGTGTTCTGCGGACGGCTGGGATATTCGAAGCACTGGGCCGGTGAGC GGCCAGTTCGATTCGTTTGGCGGCTGATAGATGCCGCGGGGTTGACGAAG CAGCCTGACTTCAAAGCCATTTTGGAGGCGGCAGGCATTGGAAGTGCCGA CCCGTCGTAG back to top
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