Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft104_17 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 182 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft104_17a-0001 ID=EsuBft104_17a-0001|Name=EsuBft104_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1829bp|location=Sequence derived from alignment at Scaffold_255:434471..437494- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGTGCCCGCACGAGATGCTCCACGGGAAGCCCCTTCTATTTCATCC
TCTGCCCTTCCTCATGCCGGGTATCGACAACGCGCGTGTCTCCGCCAAGA
TCGCGCCGAAGGGCGGTCGGTGTTTTTACCTCAACCCTGGCGACTTCGTC
TCCCACGACTGCTACAAGGTCATTTTCCCCGCCGGCGCCGCGGGGTTGTT
TGGGGTTACCGCCGCCAGCCGTTCGTCGGTCTCGTGCCCACGCACAAACA
GGGGTGCCGTTTCTGCACCGGCGGCGGCGGCGACAGAGGCACCGGCGCCT
TCGATCCTCGCGGCAGCGGCAGAAGTAAGAGCACCGGCGGCGGCGACGAC
GACAGCTGCAGGAGCGCCGGCGGCAGTGCGGACGGCTTCGGCCAGAGCCA
CACCGGCGATCACGACAGCAGCCGGAGGCGCGCCGGCGGCAGTGCGGACA
GCTCCGGCCAGAACCCCGTCGACGGCAGCAATACCACCGGAAGCAGTGGC
GGCGGCGGCGGTATCGATGGCGGGGGGAACGACAGCAGAGGCAGCAGCAG
CGTCGTCCTCGGTCGCCGCGTTGGCGCCGGGCACTCAGACGGACGCAGCG
ACGATGGCGGCGGCGGCGGCGGGGAGGGGAACGGCAGCAGCAGGAGCAGC
AGCGTTGTCCCCGGTCGCCGCGCTGGCATCGGAAGGAGTGGCGGCGGTGC
GACGGCCAGAGCGCCGTCCCCGACAGCAGCATCGGCGGTGGCGGCATCGG
TGCCGGGGGAACAGCAGCGGCAGCAGCAGCTGCGGCGTCTGCGGTCGCCG
CATTGGCGTTGGATGTCCAGACGGCCGCAGCGGCGACGGCGTCGACATCG
GTGACGGGGGTAACGACAGCGGCGACAGCAGCAGCGGCATCCCCGGTCGC
CGCGTTGGCGTCGAGTGTCCAGACAGCCGCAGGGGTGGCGGCGGCGGCAC
CGGTGACGGAGGAACGGGAGTGGAAGCTCTGGCGGCGGCAACGACGGCGG
CCGCAGTAGCGACGGGAGTGGCGGCTTCGGCCAGAGCTCCTGCGGCGACA
CCGGCGGCAGCAGGAGCAGCGACGGGAGTGGTGGCTTCGGCCAGAGCTCG
GACGGCAGCAGCAGACGGCAGCGGCGGCTTCGGCCAGAGCCCCGTCGGCG
GCNTGGGGTGGCGTCCTTCGATAGGGGCAGGAACGGGAGTGGAAGCTCTG
GCGGCGGCAACGACGGCGGCCGCAGTAGCGACGGGAGTGGCGGCTTCGGC
CAGAGCTCCTGCGGCGACACCGGCGGCAGCAGGAGCAGCGACGGGAGTGG
TGGCTTCGGCCAGAGCTCGGACGGCAGCAGCAGACGGCAGCGGCGGCTTC
GGCCAGAGCCCCGTCGGCGGCAGCGGCGACAACGGCGGCGGGGGTAGAGG
CGGCAGCAGCGACGTCACCGGCAGCCGTGTTGGCGCTGGAACTCATGACA
GTTGTGGCGGCGGGGGAAGTGCAACGGCGGCGATGGCAGCGGCGGCAGCA
GCAGTGGCGCCCTCGAGTCGACCGGGAACGGGTAGGACACGGTGACAGCG
ACGACCTCACGTTGTTACAGCCAAGTGGGAGAACATGTGAAACGTTGGCA
AGTTTGTGCGGTTTTGTGAGCGGGCATGGACGTTTTAGCTTCGCCATTTG
GCTTCGCCTTTTTTTTTTAGTTCTGTTTTTCCCTTGTTAGCGAACCGTGC
ACTTTGATCCAGAAAACACGTGTGTGCCACGGCGTGCGCGTAGTGTTTCT
TTTTTTTTGTACTTGTTTTCATGATAATTATATTAGCTCGGGGTGAATTT
TTGGAGCTGACAGCAGGGGGGCTGTTCGC back to topprotein sequence of EsuBft104_17a-0001 >EsuBft104_17 ID=EsuBft104_17|Name=EsuBft104_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=514bp
MLCPHEMLHGKPLLFHPLPFLMPGIDNARVSAKIAPKGGRCFYLNPGDFV
SHDCYKVIFPAGAAGLFGVTAASRSSVSCPRTNRGAVSAPAAAATEAPAP
SILAAAAEVRAPAAATTTAAGAPAAVRTASARATPAITTAAGGAPAAVRT
APARTPSTAAIPPEAVAAAAVSMAGGTTAEAAAASSSVAALAPGTQTDAA
TMAAAAAGRGTAAAGAAALSPVAALASEGVAAVRRPERRPRQQHRRWRHR
CRGNSSGSSSCGVCGRRIGVGCPDGRSGDGVDIGDGGNDSGDSSSGIPGR
RVGVECPDSRRGGGGGTGDGGTGVEALAAATTAAAVATGVAASARAPAAT
PAAAGAATGVVASARARTAAADGSGGFGQSPVGGXGWRPSIGAGTGVEAL
AAATTAAAVATGVAASARAPAATPAAAGAATGVVASARARTAAADGSGGF
GQSPVGGSGDNGGGGRGGSSDVTGSRVGAGTHDSCGGGGSATAAMAAAAA
AVAPSSRPGTGRTR back to topmRNA from alignment at Scaffold_255:434471..437494- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft104_17a-0001 ID=EsuBft104_17a-0001|Name=EsuBft104_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3024bp|location=Sequence derived from alignment at Scaffold_255:434471..437494- (Ectocarpus subulatus male Bft15b)
ATGCTGTGCCCGCACGAGATGCTCCACGGGAAGCCCCTTCTATTTCATCC
TCTGCCCTTCCTCATGCCGGGTATCGACAACGCGCGTGTCTCCGCCAAGA
TCGCGCCGAAGGGCGGTCGGTGTTTTTACCTCAACCCTGGCGACTTCGTC
TCCCACGACTGCTACAAGGTCATTTTCCCCGCCGGCGCCGCGGGGTTGTT
TGGGGTTACCGCCGCCAGCCGTTCGTCGGTCTCGTGCCCACGCACAAACA
GGGGTGCCGTTTCTGCACCGGCGGCGGCGGCGACAGAGGCACCGGCGCCT
TCGATCCTCGCGGCAGCGGCAGAAGTAAGAGCACCGGCGGCGGCGACGAC
GACAGCTGCAGGAGCGCCGGCGGCAGTGCGGACGGCTTCGGCCAGAGCCA
CACCGGCGATCACGACAGCAGCCGGAGGCGCGCCGGCGGCAGTGCGGACA
GCTCCGGCCAGAACCCCGTCGACGGCAGCAATACCACCGGAAGCAGTGGC
GGCGGCGGCGGTATCGATGGCGGGGGGAACGACAGCAGAGGCAGCAGCAG
CGTCGTCCTCGGTCGCCGCGTTGGCGCCGGGCACTCAGACGGACGCAGCG
ACGATGGCGGCGGCGGCGGCGGGGAGGGGAACGGCAGCAGCAGGAGCAGC
AGCGTTGTCCCCGGTCGCCGCGCTGGCATCGGAAGGAGTGGCGGCGGTGC
GACGGCCAGAGCGCCGTCCCCGACAGCAGCATCGGCGGTGGCGGCATCGG
TGCCGGGGGAACAGCAGCGGCAGCAGCAGCTGCGGCGTCTGCGGTCGCCG
CATTGGCGTTGGATGTCCAGACGGCCGCAGCGGCGACGGCGTCGACATCG
GTGACGGGGGTAACGACAGCGGCGACAGCAGCAGCGGCATCCCCGGTCGC
CGCGTTGGCGTCGAGTGTCCAGACAGCCGCAGGGGTGGCGGCGGCGGCAC
CGGTGACGGAGGTATGTGACAAAGAGTTGGAGTAAGCGGTTGGTGCGACA
ACCACGCCATTGCCAGTCTTGGAGGAGCTTCATAGCCAACGGGTTGGGGG
GAACGTGAGCAACAGCAGCAGCAGCAGCCGTAGCAGCAGCAGTAGCAGCA
GCAGCAGCAGCAGCAAGGACAGCGGCGGCGACGAGAGAGGGAACGAGGAG
TTGGATGAAATCTGGAATGGAGCCCCGACGCACCCTTTCGGCCCCGGGAA
GGCTGAGGGGGACGTGAGCAGCAGCAGAAGCAGCAGCAGCTGTAGCAGCA
GTGGCGAGGACAGCGGCGGCGATGGGCGCGGGGACGAGGGGTTGGATAAA
ATCTGGAGTGGAGCCCCGACGCACCCTTTCGACCCCGGGAAGACTGAGGA
GGAAGTGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGCG
AGGAAAGCGGTGGTGATGGGAGCGGGGATGAGGGCTTAGATAAAACTTTG
AGTAGAGCCCGGACGCACCCGTTCGACCCCGGTAAGACATCTTCGCGTGG
CGCGAGGAGACGGGGGGCGGTACCTGGGGTGGCGTCCTTCGATAGGGGCA
GGAACGGGAGTGGAAGCTCTGGCGGCGGCAACGACGGCGGCCGCAGTAGC
GACGGGAGTGGCGGCTTCGGCCAGAGCTCCTGCGGCGACACCGGCGGCAG
CAGGAGCAGCGACGGGAGTGGTGGCTTCGGCCAGAGCTCGGACGGCAGCA
GCAGACGGCAGCGGCGGCTTCGGCCAGAGCCCCGTCGGCGGCNTGGGGTG
GCGTCCTTCGATAGGGGCAGGAACGGGAGTGGAAGCTCTGGCGGCGGCAA
CGACGGCGGCCGCAGTAGCGACGGGAGTGGCGGCTTCGGCCAGAGCTCCT
GCGGCGACACCGGCGGCAGCAGGAGCAGCGACGGGAGTGGTGGCTTCGGC
CAGAGCTCGGACGGCAGCAGCAGACGGCAGCGGCGGCTTCGGCCAGAGCC
CCGTCGGCGGCAGCGGCGACAACGGCGGCGGGGGTAGAGGCGGCAGCAGC
GACGTCACCGGCAGCCGTGTTGGCGCTGGAACTCATGACAGTTGTGGCGG
CGGGGGAAGTGCAACGGCGGCGATGGCAGCGGCGGCAGCAGCAGTGGCGC
CCTCGAGTCGACCGGGAACGGGTAGGACACGGTGACAGCGACGACCTCAC
GTTGTTACAGCCAAGTGGGAGAACATGTGAAACGTTGGCAAGTTTGTGCG
GTTTTGTGAGCGGGCATGGACGTTTTAGCTTCGCCATTTGGCTTCGCCTT
TTTTTTTTAGTTCTGTTTTTCCCTTGTTAGCGAACCGTGCACTTTGATCC
AGAAAACACGTGTGTGCCACGGCGTGCGCGTAGTGTTTCTTTTTTTTTGT
ACTTGTTTTCATGATAATTGTACGCTGCGACAAGATGAGCATTGCCACAA
CCTGTGGAATAGGAAGCAGCACGTGGGCATATATACATTTTTTCCTTGAT
TCTTGTTATGTTTCCAGTCGCCTTTAACCTTGCAGCTGAATACCTTATAT
GATTTCCGTATTCTTTGGAGGGAGTGCGTCAGTCGCGTTTTTTTCTGCGA
ACTGGACACTTCAGCACATAGGATTTTTCGATACTTTGGTTCTTATGTTA
GGTTGTGAGTTAAGAATGGTCGCTCTCCGCGGTGTGTTTCTGGCCGCGCG
AACGAAATGGAATGATACCGCGTTGTTTGACATGCGTGAAGGCATACCGC
TCAGGGAGCAGGGGGGCTTTTGGAGCTCCAGTTGAGGAGGCACTTTGCAT
ACGGTACGAACTTTTTCTGGAGTTTGATGCCTTGTGTGTTCCGTGTTTTC
ATGTTTCTGGTTGGCATCGCATGTTTTGCTGCTCTTGCATCGAAAACCAT
GGGGGGGGATGTCATGTATGACCATGATTCTAGAGGGCATGAGCAGCAAT
CGAATTGGTTTGGTTCTGGTCTTGCCTAATTGTGTGTTGGTGAACGGCAA
AGCAGGGGGGCTGTTGGCATCGAGATATTAGCTCGGGGTGAATTTTTGGA
GCTGACAGCAGGGGGGCTGTTCGC back to topCoding sequence (CDS) from alignment at Scaffold_255:434471..437494- >EsuBft104_17a-0001 ID=EsuBft104_17a-0001|Name=EsuBft104_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1545bp|location=Sequence derived from alignment at Scaffold_255:434471..437494- (Ectocarpus subulatus male Bft15b)
ATGCTGTGCCCGCACGAGATGCTCCACGGGAAGCCCCTTCTATTTCATCC
TCTGCCCTTCCTCATGCCGGGTATCGACAACGCGCGTGTCTCCGCCAAGA
TCGCGCCGAAGGGCGGTCGGTGTTTTTACCTCAACCCTGGCGACTTCGTC
TCCCACGACTGCTACAAGGTCATTTTCCCCGCCGGCGCCGCGGGGTTGTT
TGGGGTTACCGCCGCCAGCCGTTCGTCGGTCTCGTGCCCACGCACAAACA
GGGGTGCCGTTTCTGCACCGGCGGCGGCGGCGACAGAGGCACCGGCGCCT
TCGATCCTCGCGGCAGCGGCAGAAGTAAGAGCACCGGCGGCGGCGACGAC
GACAGCTGCAGGAGCGCCGGCGGCAGTGCGGACGGCTTCGGCCAGAGCCA
CACCGGCGATCACGACAGCAGCCGGAGGCGCGCCGGCGGCAGTGCGGACA
GCTCCGGCCAGAACCCCGTCGACGGCAGCAATACCACCGGAAGCAGTGGC
GGCGGCGGCGGTATCGATGGCGGGGGGAACGACAGCAGAGGCAGCAGCAG
CGTCGTCCTCGGTCGCCGCGTTGGCGCCGGGCACTCAGACGGACGCAGCG
ACGATGGCGGCGGCGGCGGCGGGGAGGGGAACGGCAGCAGCAGGAGCAGC
AGCGTTGTCCCCGGTCGCCGCGCTGGCATCGGAAGGAGTGGCGGCGGTGC
GACGGCCAGAGCGCCGTCCCCGACAGCAGCATCGGCGGTGGCGGCATCGG
TGCCGGGGGAACAGCAGCGGCAGCAGCAGCTGCGGCGTCTGCGGTCGCCG
CATTGGCGTTGGATGTCCAGACGGCCGCAGCGGCGACGGCGTCGACATCG
GTGACGGGGGTAACGACAGCGGCGACAGCAGCAGCGGCATCCCCGGTCGC
CGCGTTGGCGTCGAGTGTCCAGACAGCCGCAGGGGTGGCGGCGGCGGCAC
CGGTGACGGAGGAACGGGAGTGGAAGCTCTGGCGGCGGCAACGACGGCGG
CCGCAGTAGCGACGGGAGTGGCGGCTTCGGCCAGAGCTCCTGCGGCGACA
CCGGCGGCAGCAGGAGCAGCGACGGGAGTGGTGGCTTCGGCCAGAGCTCG
GACGGCAGCAGCAGACGGCAGCGGCGGCTTCGGCCAGAGCCCCGTCGGCG
GCNTGGGGTGGCGTCCTTCGATAGGGGCAGGAACGGGAGTGGAAGCTCTG
GCGGCGGCAACGACGGCGGCCGCAGTAGCGACGGGAGTGGCGGCTTCGGC
CAGAGCTCCTGCGGCGACACCGGCGGCAGCAGGAGCAGCGACGGGAGTGG
TGGCTTCGGCCAGAGCTCGGACGGCAGCAGCAGACGGCAGCGGCGGCTTC
GGCCAGAGCCCCGTCGGCGGCAGCGGCGACAACGGCGGCGGGGGTAGAGG
CGGCAGCAGCGACGTCACCGGCAGCCGTGTTGGCGCTGGAACTCATGACA
GTTGTGGCGGCGGGGGAAGTGCAACGGCGGCGATGGCAGCGGCGGCAGCA
GCAGTGGCGCCCTCGAGTCGACCGGGAACGGGTAGGACACGGTGA back to top
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