EsuBft102_9a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft102_9a-0001
Unique NameEsuBft102_9a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_372contigScaffold_372:249653..260244 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LLI3
ProteomeIdEsuBft102_9
Protein domainsPF13086
Protein domainsIPR026852
Protein domainsCoil
Protein domainsPTHR10887
Protein domainsIPR027417
Ownerapollo_admin@sb-roscoff.fr
Notehelicase sen1 os:saccharomyces cerevisiae (strain atcc 204508 s288c) gn:sen1 pe:1 sv:2 [Automatic annotation]
Nb exon5
Max annot lvl2759|Eukaryota
Length2228
Hectar predicted targeting categoryother localisation
Evalue9.44e-172
EggNOG OGsCOG1112@1|root,KOG1801@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
KEGG koko:K10706
Descriptionpositive regulation of termination of RNA polymerase II transcription, poly(A)-coupled
COG categoryL
BRITEko00000,ko01000,ko03021
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft102_9aEsuBft102_9aEctocarpus subulatus male Bft15bgeneScaffold_372 249653..260244 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft102_9a-0001EsuBft102_9Ectocarpus subulatus male Bft15bpolypeptideScaffold_372 250822..260244 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft102_9a-0001-exonagat-exon-4548Ectocarpus subulatus male Bft15bexonScaffold_372 249653..249763 -
EsuBft102_9a-0001-exonEsuBft102_9a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_372 250406..250903 -
EsuBft102_9a-0001-exonagat-exon-4551Ectocarpus subulatus male Bft15bexonScaffold_372 251631..251783 -
EsuBft102_9a-0001-exonagat-exon-4550Ectocarpus subulatus male Bft15bexonScaffold_372 252426..252613 -
EsuBft102_9a-0001-exonagat-exon-4547Ectocarpus subulatus male Bft15bexonScaffold_372 253000..253975 -
EsuBft102_9a-0001-exonagat-exon-4549Ectocarpus subulatus male Bft15bexonScaffold_372 259943..260244 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft102_9a-0001-exonagat-three_prime_utr-297Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_372 249653..249763 -
EsuBft102_9a-0001-exonagat-three_prime_utr-298Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_372 250406..250821 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft102_9a-0001-cdsEsuBft102_9a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_372 250822..250903 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft102_9a-0001 ID=EsuBft102_9a-0001|Name=EsuBft102_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2228bp|location=Sequence derived from alignment at Scaffold_372:249653..260244- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGCGCAGGCGACGTCGGAACCAAGTCTGCAGCCCCTGCCAGAAAC
CGCTCAGAGGGCACCCGGAAACTCGACTACCAGCAACAACCTCTGGGCGA
CGAAATTGGCGCCTCCCTACCTGGTAGACGAAGCCTCGTTTACGGATGCC
TGCAAGCGACTATCGTCGGTGGAAGACTCTGCCCTTCTCGGGAAGTCCGG
TGCCGGAGGCGGGAGTCCGGCTACGGCCGCGGGTTTGGCCGCTGACATAG
CGGGGCCGGAGGAGTCGCTGATGCGATCGCTGGGGTGCCTTGCCAGCTTC
AGGGTTGCCCCGGAACTCCTCACCTCTCACGGCCGTGGCACCGCCAAGCG
CCTCAAGCGCCTCTCCAAGTCGGAGGTGTGGGGCCCTGACGTCCGCAACG
CTGCCGCTCGTCTCCTCCGGGCGTGGAGAGGGGTGGTTGACGTGGGCGGC
GGCGCGACCGCTTATTCCAAGGCGGCGACAAAGAGGTCACAAGACGAGGA
GCGTGGTGGTGCTGGCAGTGGTGGCGGTGGTGCTGGTAGCAGTGAAGGTG
GAGCCAAGGCTAAAGTTGGGGCTGAACAAATCGTTGATCGCGTCCGGCCG
GCGGCCTCGACAAAGCCGAGGCTAGTGGGAGAGAAAGAGCAGGAGGAGGA
GGAGAATGACGAGCAGCAGGGCATATCAAGCTCGGGACACAAATCCCCAG
CACCGATGCCTGACGCTGGTTCATCCAGTTCCGACTTTTCTCCGAAAGTC
ACCTGCCCTCCGGAGAAGCAACAGAAGGAGCAGCAGCAGACGCCCAAACG
GCCGAGCCTGGTACCCGCAGCTCTTTGGGACCGGCTTTCGCAAGAGTTCA
ACGTTTCTCAGCTGAGGGCAATATGGGCGGCCGCGGCGAGCGCGCGCGAA
GCCCACGAGGATCTCGCGGCAGCCGCTAGAGGGAACGATGGACCGGCGAC
TCCTGAAACGGCGGTGCTGGCTGAGAGGCGCGCTCCGGTCAACCACGCGG
CGGCGGCGACAGCGAATCGAAGGGAAGGCGGAGCGCGAGGAGGAGGGTCG
AAGGGGGGTGTGGTGCTGTTGCAGGGGCCCCCGGGCACCGGTAAGACCCG
CACCGTTCTCGGGGTCGTGAGCGCCATCCTTGCCCGCCGCGAGGAGAAAG
ATTGTGCTAGCGGTGGCGGGCGTAGCGGAGCGAGCGCTCGAGGTATGGGC
ACCACGCTGGCGCCTGAGGCGCGCCAGAAGCGGCCCGGGGTGGCGGGTAG
GTGGGTTGCGGCGAAGACGCACCAACGGGTACTCGTGTGCGCCCCTAGCA
ACGGTGCTGTGGACGAACTCGCCCAACGGCTGGCTCTGGAATCGGGCGGA
GTTTGGGACCAGCGCGGGAATGCTACTGCGCCGAGGGTGGTTCGCCTGGG
AAAGCCCTCGGAAGACGCGGCGGATCGGGTCAAGGCCGTGTCTCTTGAGT
TCATGGTAGAAGAGAGAGTGAAGCTCCACGCCAAGAGCGCCGAGGCGAGA
AATGCCGAGACGAAGATCAGAGAAACCCACGCTCGTATCGACGAGGCCGG
ACGTGCCGTGAGGAGCGGCGACGTCGGCGAGGTTGGCGGTATGGCTGGAA
TCGGAAGCGCAGAGAACAGGGATGCCCTCAGGAGCCTCGACGTCGAGCGC
GGCAAGATCAGGCGCTCGCTCGTGAGCAACGCCCAGGCAAGGCTTGGTTG
AGCGTGGTCGATCGCGTGGACGGCGAGGGCCGAAACGAACGTTGGAAAGG
CCGCAGAGCGGGAGCCCCAGCAGCAGCGGTAGCAGCACCAGCACCAGCGT
GTGATGGCGTAGAAAGCCGTGTGAGGAAGGCATTTCTGTGTTTGGCGATG
TTAGAGGCCACAGAGGGGCAGCAGCACGGCGGACGATTTGTCGACCGTTT
GAAGCAACGGGCTTGCCCATCTCCCTTCGGCGACATTCTCACGCTTATTT
CCATTTTGCCGCTGTCTTTGGCGAGCCGTTGTAGCCACCCTGCACGCCCC
TCGCCCTTGCAGGTTGTGTGCGCCACGCTCTCCGGATGTGGGTCAGGACC
CATGGTGGAGGCGGTAAGCCTTTCAGGCAAGGGCTTCGACACCGTTATCG
TAGACGAGGCTTGCCAGGCCACGGAGCCAAGCACACTGATACCCCTGTCT
TTAGGTTGTAAACGCCTCATCCTAGTAGGAGACCCTCGACAGCTTCCGGC
GACGGTTATCAGCCAACGGGCGGCCCGG
back to top

protein sequence of EsuBft102_9a-0001

>EsuBft102_9 ID=EsuBft102_9|Name=EsuBft102_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=566bp
MVAQATSEPSLQPLPETAQRAPGNSTTSNNLWATKLAPPYLVDEASFTDA
CKRLSSVEDSALLGKSGAGGGSPATAAGLAADIAGPEESLMRSLGCLASF
RVAPELLTSHGRGTAKRLKRLSKSEVWGPDVRNAAARLLRAWRGVVDVGG
GATAYSKAATKRSQDEERGGAGSGGGGAGSSEGGAKAKVGAEQIVDRVRP
AASTKPRLVGEKEQEEEENDEQQGISSSGHKSPAPMPDAGSSSSDFSPKV
TCPPEKQQKEQQQTPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASARE
AHEDLAAAARGNDGPATPETAVLAERRAPVNHAAAATANRREGGARGGGS
KGGVVLLQGPPGTGKTRTVLGVVSAILARREEKDCASGGGRSGASARGMG
TTLAPEARQKRPGVAGRWVAAKTHQRVLVCAPSNGAVDELAQRLALESGG
VWDQRGNATAPRVVRLGKPSEDAADRVKAVSLEFMVEERVKLHAKSAEAR
NAETKIRETHARIDEAGRAVRSGDVGEVGGMAGIGSAENRDALRSLDVER
GKIRRSLVSNAQARLG
back to top

mRNA from alignment at Scaffold_372:249653..260244-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft102_9a-0001 ID=EsuBft102_9a-0001|Name=EsuBft102_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=10592bp|location=Sequence derived from alignment at Scaffold_372:249653..260244- (Ectocarpus subulatus male Bft15b)
ATGGTGGCGCAGGCGACGTCGGAACCAAGTCTGCAGCCCCTGCCAGAAAC CGCTCAGAGGGCACCCGGAAACTCGACTACCAGCAACAACCTCTGGGCGA CGAAATTGGCGCCTCCCTACCTGGTAGACGAAGCCTCGTTTACGGATGCC TGCAAGCGACTATCGTCGGTGGAAGACTCTGCCCTTCTCGGGAAGTCCGG TGCCGGAGGCGGGAGTCCGGCTACGGCCGCGGGTTTGGCCGCTGACATAG CGGGGCCGGAGGAGTCGCTGATGCGATCGCTGGGGTGCCTTGCCAGCTTC AGGTGGGTGCGAGGAGCATCCCTCGAGCTTGGGTTGTGGGGCAAGCCCGC GCCGCGACCTTGGTTTATTTAGAGCGCAGAATCAGGTGCACAGCATGATT GATAAACGAGCTGCAGCTCTGCAACCGTGGCACAGGCGTGTTTGTCGACG AAGGACCACGTCGCTCGTTCTTCGCACATGTGGTGGGTTTAGTATCGTCT TTTCATGAAACAGAACGTAATTCGCCTGTGTTCTATTAGCGGTATTGTTG GTTGATTTTTACGTCTATTACCGTGTGGTTGGATTATTCCAGTCTTGACG GTGAGTTGGATTCGCCTTGACCCATGAAAAGAACGTAATTTTCTTGTTTT CTCCCGGTACCGTCTTTTGTTTTGCACCATGTGGCTGGAATGTTTCGACC CCAAGAGCCCCTGGTGCCGAAACCTCGGTAGGGGTGGAGTCCTCCTTTCC AACGACCCACCGACGATTGGTGACCCACATATTCAAAGTTTGACCCCCCG CTAACGTCAGTGGTCCAACGAATACGCGCATGCACGGCTATGAGTACCCC CCACGACTCTCGAGGACGCGTGGTCAAAAGTCTAACAGCCAAGTCTGGAA AAAATGAGTACCCCCCCCTTTCCAACCCCCCCNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCTTCTCAACC CCCACCCCCCCGCTAACAGGGTTGCCCCGGAACTCCTCACCTCTCACGGC CGTGGCACCGCCAAGCGCCTCAAGCGCCTCTCCAAGTCGGAGGTGTGGGG CCCTGACGTCCGCAACGCTGCCGCTCGTCTCCTCCGGGCGTGGAGAGGGG TGGTTGACGTGGGCGGCGGCGCGACCGCTTATTCCAAGGCGGCGACAAAG AGGTCACAAGACGAGGAGCGTGGTGGTGCTGGCAGTGGTGGCGGTGGTGC TGGTAGCAGTGAAGGTGGAGCCAAGGCTAAAGTTGGGGCTGAACAAATCG TTGATCGCGTCCGGCCGGCGGCCTCGACAAAGCCGAGGCTAGTGGGAGAG AAAGAGCAGGAGGAGGAGGAGAATGACGAGCAGCAGGGCATATCAAGCTC GGGACACAAATCCCCAGCACCGATGCCTGACGCTGGTTCATCCAGTTCCG ACTTTTCTCCGAAAGTCACCTGCCCTCCGGAGAAGCAACAGAAGGAGCAG CAGCAGACGCCCAAACGGCCGAGCCTGGTACCCGCAGCTCTTTGGGACCG GCTTTCGCAAGAGTTCAACGTTTCTCAGCTGAGGGCAATATGGGCGGCCG CGGCGAGCGCGCGCGAAGCCCACGAGGATCTCGCGGCAGCCGCTAGAGGG AACGATGGACCGGCGACTCCTGAAACGGCGGTGCTGGCTGAGAGGCGCGC TCCGGTCAACCACGCGGCGGCGGCGACAGCGAATCGAAGGGAAGGCGGAG CGCGAGGAGGAGGGTCGAAGGGGGGTGTGGTGCTGTTGCAGGGGCCCCCG GGCACCGGTAAGACCCGCACCGTTCTCGGGGTCGTGAGCGCCATCCTTGC CCGCCGCGAGGAGAAAGATTGTGCTAGCGGTGGCGGGCGTAGCGGAGCGA GCGCTCGAGGTATGGGCACCACGCTGGCGCCTGAGGCGCGCCAGAAGCGG CCCGGGGTGGCGGGTAGGTGGGTTGCGGCGAAGACGCACCAACGGGTGAG TGAGGGATCGCTGAAGAGCGGCGGCGTTCCTATTGCGTGCTCGGCGTTCT GGTTGTGCCAGGCTCTTGGCATGTGCGGTTTCCGTGCAGATCTCGACTTG CTTGTCGTGTGTAGAAACAGGACAATTGAGGGCCCACTCAGACCTTGTTG TACATCCGACGTCAACTGTGTCGCTTCCGACCGCCCCCCCGCCGGGACCT CCCGAGTGTTCAGCATAAGACCCATTCCTCTCTAAGCGCATTATGCTGTA TTTGTCGTTGTAGGCTTTTTCCTGCTCCCACGGTTGCTGCTGTCGTTGTT GTTGACGCGTGTGTTCGTGGTTGAAATTGGTACAGCTGTCGCCCTGTTTC TTGACCCCCGACCCAACTCCGGACTGCGCAGGTACTCGTGTGCGCCCCTA GCAACGGTGCTGTGGACGAACTCGCCCAACGGCTGGCTCTGGAATCGGGC GGAGTTTGGGACCAGCGCGGGAATGCTACTGCGCCGAGGGTGGTTCGCCT GGGAAAGCCCTCGGAAGACGCGGCGGATCGGGTCAAGGCCGTGTCTCTTG AGTTCATGGTAGAAGAGAGGTGACCGGCTGTTGTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTAATGTTGTTTGTGTCGTCGTCGTTGGTGGTTGT AGCTTCGACGACTCAGTGCACAAGCATGACAGAAACGGGTCGGGTCTCAG GCTCATGGTCGATCTAGTCTGCAAGAGGGAAAGAGAGGAGTCGCCATACG CCTCGGACGCTGTTTCCCTCCCTTATTTTGTCTCAAATATGAGATAGACC TTGCTGTCCTGCTGCCTGCCTGTTTCCTTGCCCAATCCAAACCAGCAGAC AAGTCATTCGACCATCCGCACGCGAAGTAAAGTTCCCCCTCGACGGCGCT TCCTCATGCGATCCACACCCCCCCGGACGTGTGCATACACACGCACGCTA ACATCTGGTCTGTGTGTCTGCACTGTTCTTGCCTGAGCACAGTGACGTGT GCATGCACACGCATGCCAACATCCGGTCTATTTGTCTCCACCGGCCTTGT GCTGAGGAGAGTGACGCGTGGAGGTACACGCTAATATCTGAAATGTTTGC GTGTCTGCACCTGCACCGCTCGTGAACCTGAGTAGAATGACTCGTGCATG AACACAACCCGCTAACATCTGGTCTGTCGGTGTGTCCGCACCGTGTTCTT GCCCTGAGCAGAGTGAAGCTCCACGCCAAGAGCGCCGAGGCGAGAAATGC CGAGACGAAGATCAGAGAAACCCACGCTCGTATCGACGAGGCCGGACGTG CCGTGAGGAGCGGCGACGTCGGCGAGGTTGGCGGTATGGCTGGAATCGGA AGCGCAGAGAACAGGTGACGTTGGGTACCAGTTGTTGTTTTCGAAGCGAA AGGATGGGTATCTCGGCAACTAGCACCGATATGTTTAGCCTAGAGAGACA GGGAAAGAGAGCATTGCGAGTGTCAGGCTAATCTAAAACTGGTGTGCTCA ATCAATTTTTAGCATGAAGCACGTTTCTTGTGCTTCGCCTTGAGCATATG TAGTCGGCTGCAAGCAGGGGCCGCACCAACCACCGCTCTCCATGCCCGTT GGCATCACAACGATCGATCCTCTGCTTCCAATCGAACGGGACGCCGGCAT CACGGCAGCGCTTTGGCTTCCTTGGCGATACGAGCGGATGGTGAACAATG CGTGTGCGGTGAAATTAGTTTGTTGGTGTGGGTGCGCGCTCGCGCCTGCC ACGCTTTGTAATGCGGACGGCGACGCTGCGGGAGCTAGGGCAAACTCCCG TAGACACCCGCAAGTGGACTGCGAACCCTTCATACCTACATTTCGGCCGG AGCAATATTGTACCAGCATGTACACCGTTTCAAATATTTCGCCAACTTGC CGTGGTCGAAGCAATCACACACACACACACACACACACACACACACACAC ACACACAAACACACACACACACACCGCGTTGTTCCTGTTTTGTTTGGTTT ACCTCGCGGCTGGCGCCCCCAGACGTCACCAGCTTAACACCCACATCCGG CGTCTTCGCGGGGAGCTTCTGGTGGCCAAGCAGCGGCGCAGGGATGCCCT CAGGAGCCTCGACGTCGAGCGCGGCAAGATCAGGCGCTCGCTCGTGAGCA ACGCCCAGGCAAGGCTTGGTTGAGCGTGGTCGATCGCGTGGACGGCGAGG GCCGAAACGAACGTTGGAAAGGCCGCAGAGCGGGAGCCCCAGCAGCAGCG GTAGCAGCACCAGCACCAGCGTGTGATGGCGTAGAAAGCCGTGTGAGGAA GGCATTTCTGTGTTTGGCGATGTTAGAGGCCACAGAGGGGCAGCAGCACG GCGGACGATTTGTCGACCGTTTGAAGCAACGGGCTTGCCCATCTCCCTTC GGCGACATTCTCACGCTTATTTCCATTTTGCCGCTGTCTTTGGCGAGCCG TTGTAGCCACCCTGCACGCCCCTCGCCCTTGCAGGTTGTGTGCGCCACGC TCTCCGGATGTGGGTCAGGACCCATGGTGGAGGCGGTAAGCCTTTCAGGC AAGGGCTTCGACACCGTTATCGTAGACGAGGCTTGCCAGGTACGGAAAAC GTTTCTCAGCTTGCCGTTAAGAGACAGCGCACAACGCGGACCAACGTTTG CGCCGGCAGAGATTGGAGCTGTTGTGTCCCGCATTCCTTTCTAGCGCATC AACAGAGAGCGTATGATACACCTGCTTGTGCACTGCCCTAGATGTAGAGA AACAACAACGGCACTTACACGCTCAACACCCGAAATCTCTCCATCACCTT ACGACCTAGCCGCCGAGGAGATACCCCCCCCCCCACCCCCCNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCCCCCCCCCCCCCCCCAACGCACAAATGCGGATGCCCGTGGT TGCTACCTGCCAACTTCTGTCCGTTGTACAGGCCACGGAGCCAAGCACAC TGATACCCCTGTCTTTAGGTTGTAAACGCCTCATCCTAGTAGGAGACCCT CGACAGCTTCCGGCGACGGTTATCAGCCAACGGGCGGCCCGG
back to top

Coding sequence (CDS) from alignment at Scaffold_372:249653..260244-

>EsuBft102_9a-0001 ID=EsuBft102_9a-0001|Name=EsuBft102_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1701bp|location=Sequence derived from alignment at Scaffold_372:249653..260244- (Ectocarpus subulatus male Bft15b)
ATGGTGGCGCAGGCGACGTCGGAACCAAGTCTGCAGCCCCTGCCAGAAAC
CGCTCAGAGGGCACCCGGAAACTCGACTACCAGCAACAACCTCTGGGCGA
CGAAATTGGCGCCTCCCTACCTGGTAGACGAAGCCTCGTTTACGGATGCC
TGCAAGCGACTATCGTCGGTGGAAGACTCTGCCCTTCTCGGGAAGTCCGG
TGCCGGAGGCGGGAGTCCGGCTACGGCCGCGGGTTTGGCCGCTGACATAG
CGGGGCCGGAGGAGTCGCTGATGCGATCGCTGGGGTGCCTTGCCAGCTTC
AGGGTTGCCCCGGAACTCCTCACCTCTCACGGCCGTGGCACCGCCAAGCG
CCTCAAGCGCCTCTCCAAGTCGGAGGTGTGGGGCCCTGACGTCCGCAACG
CTGCCGCTCGTCTCCTCCGGGCGTGGAGAGGGGTGGTTGACGTGGGCGGC
GGCGCGACCGCTTATTCCAAGGCGGCGACAAAGAGGTCACAAGACGAGGA
GCGTGGTGGTGCTGGCAGTGGTGGCGGTGGTGCTGGTAGCAGTGAAGGTG
GAGCCAAGGCTAAAGTTGGGGCTGAACAAATCGTTGATCGCGTCCGGCCG
GCGGCCTCGACAAAGCCGAGGCTAGTGGGAGAGAAAGAGCAGGAGGAGGA
GGAGAATGACGAGCAGCAGGGCATATCAAGCTCGGGACACAAATCCCCAG
CACCGATGCCTGACGCTGGTTCATCCAGTTCCGACTTTTCTCCGAAAGTC
ACCTGCCCTCCGGAGAAGCAACAGAAGGAGCAGCAGCAGACGCCCAAACG
GCCGAGCCTGGTACCCGCAGCTCTTTGGGACCGGCTTTCGCAAGAGTTCA
ACGTTTCTCAGCTGAGGGCAATATGGGCGGCCGCGGCGAGCGCGCGCGAA
GCCCACGAGGATCTCGCGGCAGCCGCTAGAGGGAACGATGGACCGGCGAC
TCCTGAAACGGCGGTGCTGGCTGAGAGGCGCGCTCCGGTCAACCACGCGG
CGGCGGCGACAGCGAATCGAAGGGAAGGCGGAGCGCGAGGAGGAGGGTCG
AAGGGGGGTGTGGTGCTGTTGCAGGGGCCCCCGGGCACCGGTAAGACCCG
CACCGTTCTCGGGGTCGTGAGCGCCATCCTTGCCCGCCGCGAGGAGAAAG
ATTGTGCTAGCGGTGGCGGGCGTAGCGGAGCGAGCGCTCGAGGTATGGGC
ACCACGCTGGCGCCTGAGGCGCGCCAGAAGCGGCCCGGGGTGGCGGGTAG
GTGGGTTGCGGCGAAGACGCACCAACGGGTACTCGTGTGCGCCCCTAGCA
ACGGTGCTGTGGACGAACTCGCCCAACGGCTGGCTCTGGAATCGGGCGGA
GTTTGGGACCAGCGCGGGAATGCTACTGCGCCGAGGGTGGTTCGCCTGGG
AAAGCCCTCGGAAGACGCGGCGGATCGGGTCAAGGCCGTGTCTCTTGAGT
TCATGGTAGAAGAGAGAGTGAAGCTCCACGCCAAGAGCGCCGAGGCGAGA
AATGCCGAGACGAAGATCAGAGAAACCCACGCTCGTATCGACGAGGCCGG
ACGTGCCGTGAGGAGCGGCGACGTCGGCGAGGTTGGCGGTATGGCTGGAA
TCGGAAGCGCAGAGAACAGGGATGCCCTCAGGAGCCTCGACGTCGAGCGC
GGCAAGATCAGGCGCTCGCTCGTGAGCAACGCCCAGGCAAGGCTTGGTTG
A
back to top