EsuBft1029_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1029_5a-0001
Unique NameEsuBft1029_5a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_70contigScaffold_70:317064..327231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FL61
ProteomeIdEsuBft1029_5
Protein domainsIPR007991
Ownerapollo_admin@sb-roscoff.fr
Noterna polymerase i-specific transcription initiation factor rrn3 os:homo sapiens gn:rrn3 pe:1 sv: [Automatic annotation]
Nb exon11
Max annot lvl2759|Eukaryota
Length3403
Hectar predicted targeting categoryother localisation
Evalue0.0
EggNOG OGsKOG2434@1|root,KOG2434@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-19_005380.1
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameRRN3
KEGG koko:K15216
GOsGO:0000120,GO:0000182,GO:0000976,GO:0001013,GO:0001042,GO:0001046,GO:0001047,GO:0001067,GO:0001163,GO:0001164,GO:0001167,GO:0001169,GO:0001179,GO:0001181,GO:0001188,GO:0001701,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006356,GO:0006360,GO:0006361,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007000,GO:0007028,GO:0007275,GO:0007399,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009303,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0019899,GO:0022008,GO:0022607,GO:0022613,GO:0023051,GO:0023057,GO:0030154,GO:0030718,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036099,GO:0042254,GO:0042592,GO:0042790,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0044798,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070063,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098727,GO:0098781,GO:0120035,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1901797,GO:1902253,GO:1902254,GO:1902531,GO:1902532,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000026,GO:2000112,GO:2000142,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Descriptionrna polymerase i-specific transcription initiation factor
COG categoryO
BRITEko00000,ko03021
Cross References
External references for this mRNA
DatabaseAccession
GO0003824
GO0071840
GO0044699
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1029_5aEsuBft1029_5aEctocarpus subulatus male Bft15bgeneScaffold_70 317064..327231 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1029_5a-0001-exonagat-exon-26131Ectocarpus subulatus male Bft15bexonScaffold_70 317064..318601 -
EsuBft1029_5a-0001-exonagat-exon-26138Ectocarpus subulatus male Bft15bexonScaffold_70 319239..319544 -
EsuBft1029_5a-0001-exonagat-exon-26137Ectocarpus subulatus male Bft15bexonScaffold_70 320374..320556 -
EsuBft1029_5a-0001-exonEsuBft1029_5a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_70 320933..321088 -
EsuBft1029_5a-0001-exonagat-exon-26132Ectocarpus subulatus male Bft15bexonScaffold_70 321493..321759 -
EsuBft1029_5a-0001-exonagat-exon-26133Ectocarpus subulatus male Bft15bexonScaffold_70 322443..322559 -
EsuBft1029_5a-0001-exonagat-exon-26134Ectocarpus subulatus male Bft15bexonScaffold_70 322962..323018 -
EsuBft1029_5a-0001-exonagat-exon-26139Ectocarpus subulatus male Bft15bexonScaffold_70 323930..324138 -
EsuBft1029_5a-0001-exonagat-exon-26135Ectocarpus subulatus male Bft15bexonScaffold_70 324607..324788 -
EsuBft1029_5a-0001-exonagat-exon-26140Ectocarpus subulatus male Bft15bexonScaffold_70 325866..325981 -
EsuBft1029_5a-0001-exonagat-exon-26136Ectocarpus subulatus male Bft15bexonScaffold_70 326960..327231 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1029_5a-0001-exonagat-three_prime_utr-280Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_70 317064..318583 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1029_5a-0001-cdsEsuBft1029_5a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_70 318584..318601 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1029_5a-0001-exonagat-five_prime_utr-162Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_70 327101..327231 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1029_5a-0001EsuBft1029_5Ectocarpus subulatus male Bft15bpolypeptideScaffold_70 318584..327100 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1029_5a-0001 ID=EsuBft1029_5a-0001|Name=EsuBft1029_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3403bp|location=Sequence derived from alignment at Scaffold_70:317064..327231- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CGCACGGGCCTCAGCCCCTGCATCGGCGTGGTCAGACAACACGCTGCAGC
TTCCTAAAGCCTGGGGAAGGGGTTGATTGTCACTTGTTCCCACGAACGGC
GAGTTTCGTGCACGAAGACGGTGCTGAAGAAATGTCCCTCTCGTCGCGGC
CAGCCAGTAGCAGCAGCAGGCAAGCGGGAGACTCCAGCAGCAGCAGCAGC
TCTCAAGACAGGCAGGATGGATTGCTTCCGGTCGTTAAGTTCCTGCAGAG
CGCGCTTGCCATGAAGGCGAAGGGCGACGGTCACCACTACCAGCACTTGG
TCGCGCAGCTGCTCACCCGGGATGACCCGGAGACGCTGTGGCGCCTCTAC
CTCGGACTCTCCCAGTGCGTCACCATCATCTCGCAGCAACCCGACGAGTT
CAAGGAGCTGGTCGATGCCCTCTTCCGGTTCGACTGGCGAGGAAGCGACA
AGATCGTGCAGTCCTTCAGCGGCCTTCTGCAACACCTCGTGTCGGCCAAC
TCCACCTGCATGGTGCCCGCCATGCACATGCTCGTCAGGAATCTCGTCCT
CACCCCCCGGGACCTTGACTGTGAAGGGAACGTGGATCCGGCGGCCCTAA
CTCGGCAGCACAACGTGCACGCGGCGCTTCAGGCCAGCCTTACCCTCGTC
CCCAGCGGCCGGTCCAAGCTGTTCGGCGTGCTCAAGCAGAACTACCCGCA
CCGCAGACTAAGGGCGGAGGTTTTGTCCGACTACGCTCTGCATGCACTTC
GGGTTGTGCAGTACGCCCCGCTCATTGAGGAGAGTGTCCTGAGGCTGATC
ATCGAGAAAGGTCTTGAGATCGACGTTGAGATTAAGATAATGGACACTGG
GGAGGCTGTGGTCGACGACGAGGACGACGAGTGCGACGCGTTGTTCACCA
TGGACGACGTCGTAGACGGAACTGCCGACAACAAGAAGCAGAGCACCGAT
GAGGTGGACGAGATGGCCGACAAGCTGGACGGGGTCATGCTCGTGGTCTT
CAACTACCTGGACCAGCGCCTCACAGCGAACGCCTCACTGCCGCCGGAGA
CAATACTGGAAACCTCCGTGGCCGGGGATGGGGGTTGTGAAGCCGTTGCG
GCGGCACAAGCCGTCTTGCAGGGAGACGAGGCGGGCAGCGACAGTTGTAC
CCCGAAGGGACGGGGGGGCGGTTCGACGGGAGGGATGCAAGGGATGGAAC
CCGTGGCACGACTGTTGAAGTCTCTTCTGGTGGTCTTCGAGGAGAACATT
CTGCCGACACACCGCAGTAAGTTCGTGCAGTTCGTGCTCTTCTTCGCCTC
CGGCCGTGCGCGCGGGCTAGGCTACGCTCTGGTGTCAAAGCTGGTCGGCG
TATTGAAGGATGAGTCTCGGCCGAAGTTGACTCGCCAGAGCAGCGTGGCG
TACCTTGCCAGCTTTGTGGCGAGAGCTTCCTTCGTGGACCCCTCGTTGGT
GTCCACTGCCGTACAATCGCTCTTGGACTGGGCAGGGCAGTACCTGGACC
AGTACGCCGACGCCTCCATAGCAACGCCGGTACAAGCGCTTGGAACTCCG
AGCTCGAAGGGGTTCGAGACCCCAGTGGCGACCCGCGTCCGGGCGAGGCC
ACAGTCCTGGCACGGAAACCACCCTCGCCGGAGCGCTAACGGCGGCGACG
GAGGCGGCGGGATGATCGATGCACCGATGTCCGCGGTGGCCTCGAGGTCG
GGGGTCGGGGGCAGCGGCGGGGTGGGCGTCGGCAGCAAGAGTAGCAGCAG
CAGCAAGAGCAGGCCGGCGGACCACATGCTCTTCTACTCAGTGTGCCAGG
CGACTTTCTACGTGATGTGCTTCCGGGGGGACGAGCTCGCCGCCATGGAA
GGCTTCGACAGCCAGGCATTGCTGAAGAGGTAGGCTTGCAGGAAGCCCCT
CCGCTTTGTGGTGTACGTTTGGTGGTAGAGCAGGCCCGTGCAGGCGGTGG
TGGTTTTTTGCTGCTGTGCTCGTTCTCGAAGTACCCTACACGATGATCGA
CGTTTCTTTGCCGGACTTTCTCTGCGCTTTATATGAGCTCCCACGCCTTT
TACTAAGGTTGCCGGGATTTTCGTCGCCGAACTCCGTCAAGCAAAGCAGG
TCATCACGTCTTGGCACACTCGTCTTGGCACACCCGGGTACCCGCGGTAT
GATATGATGATCACATATCCGGCCGACACGCTTGCCTACATACAGCGGTG
AGGCATCGCCACAGACTCACCTTTGTTCCGTGCCCCCCAACCCGACCGCC
CTCGCAGCGGTCGCACGTGTCGCAGACCATCACCGTCGGTTCAAGCTTTT
CCTGCTCCACGCCGAGGTCATCGTCGTCCATGTCCATGTCGAGCAACGCC
ATGTGGACTCCCTCTCGGGTTACCAAGGCTGGCGGCCTGGGACGCGGGTC
GAACCCGCTTGACTCGTTCTTTCCGTTCGACCCGTATCTCCTGCGGAGAT
CGCACGTGTACATCGACCAGATGTACAACACGTGGAAGGTGCGTTGGGGG
GGGGGGGGGGGTCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATCCCGCACAATGCGGGGT
GAAGCCACCGCAAATGTATGCTGCGTCTGGAGCCTTGAAGGACAGTCGGT
GTGTAGAGCTGCTGGTGTTGATGTGCGTCGACGGTTTTCTGTTTCGCGTG
TTTCCGCCGGTTTGTGGGAGAGACAGATAGACACCTGGTTCGGAAGTCGG
AAATCTTGTGACGATGTGTTGTACTTGGTCTGTCTGTTTTACGTGGCCCT
AAGAGACGACAGCCGCACCTCAACACGTTAATATAATACTTTCCCCCCTC
CTCGGCCTGCTCCCCGGCCGGGGCCGAAATCGACCTAGTGAGTCCCTCGC
GGGCGAACCAGGACACAACAGATAGTAGGCGGGTGGTGTCCCAAGGTGCA
ACTCACCGCCGCGCTGGCTCAGCGTGGCGGTGAGGATGCACAGACGGTGG
TAGTGGCGAGAGGTGTGTATGGACACTGTTCCCGCGGCAGTAATGCGAAA
CGGCAAACTGCACCTGGCAACCACCGTCGCGGAAAGCGTGGCCCACGAAG
CTGGAGGAGTAGAGAGAGATTTGTAAACACCACGTCAGTAAGCACCGCTC
GCGGGAGAAGGGAGACGACCGCGGGCACCGCGGGGAGGGAGTGCTGCACC
CTCCTCGTCAAAACACCACAGGCAAGAACCGAGCTCTGCAGAGATGGATT
GATGCGAGGAAACTCGCCGCTCGGAAGATACGGAAGAAAGCACACCCGCA
ACGCAAGGTGGACCGAGAGAGAGACGAGACCGCAGCGGCCGTCAAGGCAG
CTGCGAAGAAGAAGGCACGAGAGGGCGACCTATCGTTCGGCACGTTCAAC
GTA
back to top

protein sequence of EsuBft1029_5a-0001

>EsuBft1029_5 ID=EsuBft1029_5|Name=EsuBft1029_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=583bp
MSLSSRPASSSSRQAGDSSSSSSSQDRQDGLLPVVKFLQSALAMKAKGDG
HHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRF
DWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGN
VDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSD
YALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDE
CDALFTMDDVVDGTADNKKQSTDEVDEMADKLDGVMLVVFNYLDQRLTAN
ASLPPETILETSVAGDGGCEAVAAAQAVLQGDEAGSDSCTPKGRGGGSTG
GMQGMEPVARLLKSLLVVFEENILPTHRSKFVQFVLFFASGRARGLGYAL
VSKLVGVLKDESRPKLTRQSSVAYLASFVARASFVDPSLVSTAVQSLLDW
AGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRR
SANGGDGGGGMIDAPMSAVASRSGVGGSGGVGVGSKSSSSSKSRPADHML
FYSVCQATFYVMCFRGDELAAMEGFDSQALLKR
back to top

mRNA from alignment at Scaffold_70:317064..327231-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1029_5a-0001 ID=EsuBft1029_5a-0001|Name=EsuBft1029_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=10168bp|location=Sequence derived from alignment at Scaffold_70:317064..327231- (Ectocarpus subulatus male Bft15b)
CGCACGGGCCTCAGCCCCTGCATCGGCGTGGTCAGACAACACGCTGCAGC
TTCCTAAAGCCTGGGGAAGGGGTTGATTGTCACTTGTTCCCACGAACGGC
GAGTTTCGTGCACGAAGACGGTGCTGAAGAAATGTCCCTCTCGTCGCGGC
CAGCCAGTAGCAGCAGCAGGCAAGCGGGAGACTCCAGCAGCAGCAGCAGC
TCTCAAGACAGGCAGGATGGATTGCTTCCGGTCGTTAAGTTCCTGCAGAG
CGCGCTTGCCATGAAGGCGAAGGTGAGCTCGGTCTTCCATAGCCGGAGTA
AGCAGAGGTTGTCGGGTTCGTGAGAGAGCGATTTTTTCGCGATGGTGTAG
GCAGAGGGATAAGGATGGGGCTGCAGGCGGAGGGGCGGCGTTGAAGGTCC
GCCCGCCAGGATGCAAGATGGTCCATCGTCGCAGTATTGTTGTAGTGTTG
TAGTGTTGCTTGCTGGCCTGATATGTCATGGCAGCCCAAACAGGCGCGTA
CGTCGAACTCAACGTGCACGTTTTCAGGCGCAAAGGAAGATTGCTCTTTC
TGCCTGTCAGCCACAGCAGGTTGCTTCACCTGCAGCCTTTTTTACTGGGG
GAACATGATTTCTCTCGGCATCAGCATTGCGGTGGTCTACCTTTCAGCAT
CGAGGGCAGAGCTTGAAATGAAAGAACTGTACTGCATTGCAATGGGCAGC
TTTCGCCTACAGATTCGTGGGTGCTGGTGGTGTGGTGCGTCTGGCGCCTT
CATATCGTTCTCGTTTGCTCTTGGATGACGGGGTCTGTCCTGTGGTCCTG
CCCAATCTGCAAGTGTCGGTGTGCCTACAGTCGGTCACGGTGTGCCCCAG
AACTGCTGGGCATGGGCGACCGACTGCTTATCCCTTTCAGATTGTATCTA
TCCCGCAAATAGCGCGGTCGTATTTATCACCCTGCACAGCATTGACCGCA
AGAGTGGTGTGCGTGGTTTTCCATAAGATGGTTGATTGTTGCTTCTCTAG
GCATTTCTGTCCTACTCTGGAACCTCGTAAAAGTCGGCCTTTTGCACGGG
CTTTGATGTGCAAGTCACCCCATGGGGTGTGGTACTTGACAGCCCATGAT
GCTGCAGTTCACGAAGGACCCACCCTCAACGATGGATCTAGAGAGGATTC
TCGAAACACCATCCTACTATCTAGCAGACTACATCATATTGACGAGGTTT
TGTATCATGGCCTCGTGGTTCGATCGGATGATGCTTACGCTTTCTTTCAG
GGCGACGGTCACCACTACCAGCACTTGGTCGCGCAGCTGCTCACCCGGGA
TGACCCGGAGACGCTGTGGCGCCTCTACCTCGGACTCTCCCAGTGCGTCA
CCATCATCTCGCAGCAGTGAGTTTCATTGCAATCCCCCGCATGTTGTCAA
GCTGCAGTTGTGTTTGCTGCACATACAGTACCAGTAGTGCTATCGTTTTG
CGAGTCTACAATGACACATGAGCACACAAGCGCTAACGTCACAGCAGTGC
TTTTGGTGTTGTGGGAGTCTACATGTATGGTATGCACATAAGCGTTTCCA
TGGCGATTACTCCGCAACGCAACGCTCTTTGCGGCATGGTCCTGTGTGAG
GTAAGATTCAGCTGCTCATCCCTCGAGAGCTCGGATTGTTGAGGCGTTGT
CTTCCGGTCACATTCTCTGCTCATCACCTCCTGTGGCATCCGTGCCATCC
CGTCCAACAGGATGCACAAGGGCCAGGTCATGGGTTCGAGTCCCGACAGA
GTGAGTTTTTTCTCGCCAATTAAATCCTGGTCTCCGTTGGAAGCGACGCG
CTGCAAAGCTTGGTGTTAGTAAACTTGATCGACTTCATAAGTCGCGAGGG
AAGGGATTGCTGTACCCTTCTCGCGATAAAATATCTTAGGCAAGAACCGC
AGGAGGGGCCCAACCCCCCCCCTTCCAATGTGACCCCGGTTGGGTCGTCT
AGCTGGTAGAAATGGAGGATAGGGGCCAGAGGGGCAGACGACAGAGTCCA
ATGATGGGAGAAAAAAAAGAATATATATATATATATATGCCTGTCGTTAC
CTCGCTTGTTTCATGACAAGGCGTCCTCGTATGCCCCCCCCTTGGTATTC
TCTCTCCGCCTGATTTGCGCTCGTGGGCCTCACGGACTGCTGTGTCTGCG
GGAATAGAAAAAGAGTTGGTTCTGTTGACTTTGATTCGTCGTGGCTGTAT
AACGAGGAGGCACAACCTATCTAGTATCTACAACATTTTTTCGGACCGCC
TACGCAGGATTTTAAAGTATTTCAAAAAAATAATGGAGAGGGGGCACGCA
GACCCTATCGTTAACCATAACCATAACCCCAAAACACGGATTGAAAACGT
TTTTCCAAATGTTGGCTTAGTAAATTTTGCTGCGTAGACTGCTGTTTATT
TTGTAACCTTGTGTTTGGCGTTTGTTTGTTTGTTTCTGCTTAGACCCGAC
GAGTTCAAGGAGCTGGTCGATGCCCTCTTCCGGTTCGACTGGCGAGGAAG
CGACAAGATCGTGCAGTCCTTCAGCGGCCTTCTGCAACACCTCGTGTCGG
CCAACTCCACCTGCATGGTGCCCGCCATGCACATGCTCGTCAGGAATCTC
GTCCTCACCCCCCGGGACCTTGACTGTGAGACAGACCAATCCATCCCCAA
TCATCGTTTCGACGAAACAAAGTAAACAAGTACGAAGTAGGGTTTGTATG
TACATTGCATATGTATATTGGGTGCTTATTTTCTTGTATAGTCTATATTG
GATTTTCTGGGGGGCTCGAAGACCAAGTCACACTTTGTCATTCCAGGGCG
CCGATTCGTATGGCGGATAGTGTACGACACCTTCGCCAGGTGGCCTTGAC
TTACGACCTCGCCATGTGTCCTGTGTGTTTGCCACGCACGAGCCCGTAAA
CCGCAAATTTCTTCACGATCTGACATTCACGCTTGCAAGCACAGCGCCTG
TTTGCTTGAGTGTAGCGAGCTCTTGAACTTGTCAATCAACGATGGTACAG
CTCAAACAGAGGAGATCCTCTTGACTCCCAGTGCCTCAGATCGCCGCGGT
TGGTGCTAATCGCATTGCAATGCTATGATTCTGCCCTCCACAGGTGAAGG
GAACGTGGATCCGGCGGCCCTAACTCGGCAGCACAACGTGCACGCGGCGC
TTCAGGCCAGCCTTACCCTCGTCCCCAGCGGCCGGTCCAAGCTGTTCGGC
GTGCTCAAGCAGAACTACCCGCACCGCAGACTAAGGGCGGAGGTTTTGTC
CGACTACGCTCTGCATGCACTTCGGGTTGTGCAGTACGCCCCGCTCATTG
AGGTAAGAATGCCAACGCTTGTACTGCTGTACATTTAGCGCTCGCACCAC
AGAACCTCTCATTTTGTTCGGTTGGTGCTGCTGTTCTTTGTTCCTAGGGT
TGAGCTTCAAATGGCCGCTGTACAGGTTTTGTTGCAGGGGTTCTTGAACG
GGCCCATAACTGTTGCACAAGTCCCTAGATTTTGAGTGTCACGAGGAACA
TCATTTTTTTTTTCAACTGCCAAGTTTTCAAATGCTTGTTTTGTGCTTAC
CGTGTGCCTCTTGCCTGGTTGCACCGCTCAGCATGTCAAGGCTTTGTTGA
GGATGCCAACGTTTCGTTCCGTTCGTAGAGGTGGTCTGGCCTGCTTCCAA
TGTATCCCGGTTTGAGGGCGGACGTTGTAAAGTGGTTGGTGGCCTGCGCG
CCCATGCTCATCGAGCCGCCGAGGCACCGCAAATGATCGTCACTCTGTAT
TTTGATTGTTTAGATTATCCAAGTTCCCTCGCGTTAGCGTTTGTCTTTGA
GTGTGAAGATGTTCCTGAGTCACCCATCCTATCCGTTGCCAACGGACTCT
GCACGTGCAAGGTATTGCTGCTGGCATCACTACAGTGGCGTTTGCACCCT
CGGTTTAAAAATATCCAGTATCACAAAGCAAGTGCACAAGACAGCTTGAT
GTGTGGACTCCTGATCTCCTGGGATGCGGTTCTTTGACAACGCGAGTGGT
TTCACCTTATTGCGGGATTCCCTTGTAGTCAACTACTGAAACAACGACAG
TCTACGGAGATGCGGTACAATCGTGAGGACTGCTTCTGACATTGACTGTA
GTTACGTATCGCCTTGCTAGTCAATAACGCCCCGTGAAATCAATGTTGGC
GTGCTTTTACATCTTATTTTAACCTTGCTGTCCTCCCCCTCGACGTTACC
CTCGACGTTACAGGAGAGTGTCCTGAGGCTGATCATCGAGAAAGGTCTTG
AGATCGACGTTGAGATTAAGGTGGGTGGGTTGGAGTGCGGCCCAGATCGA
CTGGAGTGATGCCGTTGTCGGTGTGTTTCTCGAGCATCACTTGGTTGACG
ATGATGTGTGATGCCATTGTGCGTGGCGCGATTTATTGATCTGTCTGCAC
GCTTGCAGTCTTTGTTTCGTTGATCATGATTGTGATCGTGATGCTGGCGG
TTTGCGGTGTGGGCCATGGATGATGCTTACGTACCTTCCCGCACAGCCTT
CCACACCTAGGCATCAGATGTTTGATGGCACACTATGTGATACTGTTGAA
ACTAACCCGATCATCCCTCAGCTCTTCATGTAGTGTGCTTCTTATCTCAG
TTATATAAGTAGTTTTCATACCAACCCGATCGTGCTTCGGCTCTTCATGT
GCCCTGTCCCTCCTTCGTTCAGATAATGGACACTGGGGAGGCTGTGGTCG
ACGACGAGGACGACGAGTGCGACGCGTTGTTCACCATGGACGACGTCGTA
GACGGAACTGCCGACAACAAGAAGCAGAGCACCGATGAGGTGAGGGAGCC
GCCACCATCATCACCACCTTGCGTGTGTACGGAATCAGAGGAGTGAGTTT
AGTCGTTGCGGGGGTTGTGGGGGGGGCCTATCGATTAGGCAGCGGCCGAT
GTCACGCGACCCCTCGGTGCATCGCCAAGGGGGATGAGACCGAGCAAGCT
CTGGCTTTCTGTTTGCGTTGCTTTACAGAGTCCAATTTTGATTGCAGAGA
GAACGTTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCGCATGTAGGAC
AGACATCACGACGAGGGAAGGAGCGAGGGTGTGGAGCTCAAAGGCAGCGT
CAAAACACCTGCCGGTGCAAGAGCCCACGGAATGCCATCTTCCTCAGCGA
AGCCGTACATGTGGAAGCGCCCGGCTAGTATCTAGTCTCGGAGTTTCGGA
CCTTGCATTCATCCATGTGTCGACCGGGAGACAATTGAACCCACGAACTA
GTGCACAACGCTGCTGTACCAGGTGGACGAGATGGCCGACAAGCTGGACG
GGGTCATGCTCGTGGTCTTCAACTACCTGGACCAGCGCCTCACAGCGAAC
GCCTCACTGCCGCCGGAGACAATACTGGAAACCTCCGTGGCCGGGGATGG
GGGTTGTGAAGCCGTTGCGGCGGCACAAGCCGTCTTGCAGGGAGACGAGG
CGGGCAGCGACAGTTGTACCCCGAAGGGACGGGGGGGCGGTTCGACGGGA
GGGATGCAAGGGATGGAACCCGTGGCACGACTGTTGAAGGTAGGCTCGAT
CGTCTCTTCAACGCGTTGCCGGCACTAATTTTCCTCTCGAATTATTCTTG
GCTTACTATGACGAAGGTGCAAACGAAAGGTTGGGGTCCTGTTGGCCAGT
TTGCGGTCTTGCCATGATCTTGATTACGCTTGTAGGCGCAACGGCAGCAG
GGTACGCACGGCCTGCAATACGAGGTGCAATGATCCGTCCCTCTTGCTGT
GCGCCGTAGATTCATGCTGCTAGACGGTGGGTGTACCATCTGAGTTGAGG
CATGTGGAATTACGAGGTTTCTGGTGGGTTGTTTGCTTGTCCACTGCTGT
TGCTAATGCTGCTGCTGTAACCCAGCTCTCGCCGTTGTGTGTTTTTGCAC
CTCTCGACCTTCTCCCATGACATGACATGACGTGAGATGACAGTCTCTTC
TGGTGGTCTTCGAGGAGAACATTCTGCCGACACACCGCAGTAAGTTCGTG
CAGTTCGTGCTCTTCTTCGCCTCCGGCCGTGCGCGCGGGCTAGGCTACGC
TCTGGTGTCAAAGCTGGTCGGCGTATTGAAGGATGAGTCTCGGCCGAAGG
TGATGATTCGTGCAGCGCCTGCTCTTCCTCGCTGACGGGGCTGACCTCGT
GTTAAATGTTTAGTGGTGCTTTGTTCCTTTTGGGATGTGTGGGGAAGTGT
GAGTTCGAGCGTGCGGATTGAGTGAGAAGTTAAGACCCTCGGTGATCGGA
TTGATCGCTGGCGCGATGCTGTTCAATGCTCACGGTCGCGATGGTATGTT
TCGAGTGTAGTGGCAGAGTAGTTGGACCCTCTAGTAGTTGTGATAGGTTT
AGATTCGGCATTGCCTGCCATACGCATATCCTCCATCTATCCTATCCTAT
CTTCCTACTTGTCCACCACCAAATTTTCCATGCTTATCCCTGTGCTCCAT
CAAACTCCTGATTTTTTTTTGTCAGTTGACTCGCCAGAGCAGCGTGGCGT
ACCTTGCCAGCTTTGTGGCGAGAGCTTCCTTCGTGGACCCCTCGTTGGTG
TCCACTGCCGTACAATCGCTCTTGGACTGGGCAGGGCAGTACCTGGACCA
GTACGCCGACGCCTCCATAGCAACGCCGGTACAAGCGCTTGGAACTCCGA
GCTCGAAGGTGCGCGGCTTGTGTTGCGGGCCGTTAGGTTATTTGAGTTTC
GGTCGCGCTTACCTGGCCTTACGTAACCTTGCTTGCCACTGTAAGCACGG
TTGTCTTGATGCGAGACCCCGGGTATGGGCATGGCCTTCTAGTCTCCAGG
CTCCCTCGTTAGCAGGAGGGGCGCGGAGGAATTCGTATGTCAAAAGTTTT
GTTAGGGGACGGTCTGAGGCCTGGAATGCGAAACAGGAGACGTGAAATGA
CCGCTATTGCGTTTCTCCTGCGGGTTCCGCTCGTGTACTAGCGTGTCAAA
AGGATCATTGTTAATGTCATCGATGTCAATCTCAACTGTAGCGGCGACGT
CGGCCCTGGTTCGGCGACCAATAAATTAAGGAAGGTTTGCCTCAATGGAA
CAGAAGTCAGTGAAGATGAAGGGGACACAACATTTTGGAAGCACCTCGTA
CATGTCCGTTTGCCCAATTGCTGCTAAAGTTATTATCGCCATCCAGCCAT
GCGAGAAGAAAACGGAGTTTACAGCCCCCACACATTAACAACCACCCGGT
ACGCGCGAACGCAGGGTCACGCCCGAGGGCATGTGCCCCGAAAGTGCCAT
GAATTGATCGAGAGTTGATCCTTATGCATTTTCTAATGACTTGTTTGTTG
AGCTACAGTAGCAGCTGGTACCGAAGGGATACCTGTTTGGAACGCTACAC
CACATGCTTCCGACCCGCTGTTGAATAGCCAACGGCCGTCCGACTCAAGA
AAAAAAAAACAAGCACCGTCAGTTGTAGCCTGCAACCTCTCTGCGTGCTA
TCACAGCCACTACCTCCTTCGCTGCTTCCCCCCTTAGGGGTTCGAGACCC
CAGTGGCGACCCGCGTCCGGGCGAGGCCACAGTCCTGGCACGGAAACCAC
CCTCGCCGGAGCGCTAACGGCGGCGACGGAGGCGGCGGGATGATCGATGC
ACCGATGTCCGCGGTGGCCTCGAGGTCGGGGGTCGGGGGCAGCGGCGGGG
TGGGCGTCGGCAGCAAGAGTAGCAGCAGCAGCAAGAGCAGGCCGGCGGAC
CACATGCTCTTCTACTCAGTGTGCCAGGCGACTTTCTACGTGATGTGCTT
CCGGGGGGACGAGCTCGCCGCCATGGAAGGCTTCGACAGCCAGGTGCGAG
GGGAACGCGGGTTTCGAGCGTGTCGAATGACTCTAGTTGTAACGCGAATG
ATAGTGCGGAACACGTGTAACGGTCGTTGCGGGTATACATAGGATCGACC
AAATGTTTCCCACGGCGTGATGCGCGTGCATCGATGAGTTGAGGCGGGAT
TTCTTTGGCCGCGCACGTAACGCGATGTGACACATTGCGGTATTAAAAGT
CAAAGCGAGGGATCATGGTCCGAACAGTCGCTCGTTTCTCGGACATCGTA
TTTTCCGTTTGATGGGTGTTGGTCCTTCCCTTTCCCTTTTGATTTCAGGC
AATAGTGAGGACCTGTCAGCACCGCTGCTATGCACGGCCCGATATCTGTA
CTGCTATGCCGATGATGTCCTACCGATGTAGCAACGCATGTCGATGCGTC
AACACCGGACGTGGTTCTCAAGTTTAGCCTATCGTGTCCTGTGCCGTTTC
GCGTCCCCTGCCGGTGCATGTCTTGGGGCCGGGCAAAGGCGGTGATTTGG
CAGCGGCTGTTGACGTGCCCGTTGTATCCCCTGCGGCGCTGTCTGGACAC
CGTTCGGAGGGAGTTCGCTCGGCTGTGCTGCGGCCTCATGGACGCTTACC
TGGACAGAGATCTGCTGGAACACCTCGCAGGCATTGCTGAAGAGGTAGGC
TTGCAGGAAGCCCCTCCGCTTTGTGGTGTACGTTTGGTGGTAGAGCAGGC
CCGTGCAGGCGGTGGTGGTTTTTTGCTGCTGTGCTCGTTCTCGAAGTACC
CTACACGATGATCGACGTTTCTTTGCCGGACTTTCTCTGCGCTTTATATG
AGCTCCCACGCCTTTTACTAAGGTTGCCGGGATTTTCGTCGCCGAACTCC
GTCAAGCAAAGCAGGTCATCACGTCTTGGCACACTCGTCTTGGCACACCC
GGGTACCCGCGGTATGATATGATGATCACATATCCGGCCGACACGCTTGC
CTACATACAGCGGTGAGGCATCGCCACAGACTCACCTTTGTTCCGTGCCC
CCCAACCCGACCGCCCTCGCAGCGGTCGCACGTGTCGCAGACCATCACCG
TCGGTTCAAGCTTTTCCTGCTCCACGCCGAGGTCATCGTCGTCCATGTCC
ATGTCGAGCAACGCCATGTGGACTCCCTCTCGGGTTACCAAGGCTGGCGG
CCTGGGACGCGGGTCGAACCCGCTTGACTCGTTCTTTCCGTTCGACCCGT
ATCTCCTGCGGAGATCGCACGTGTACATCGACCAGATGTACAACACGTGG
AAGGTGCGTTGGGGGGGGGGGGGGGGTCCCCCCNNNNNNNNNNNNNNNNN
NNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATCC
CGCACAATGCGGGGTGAAGCCACCGCAAATGTATGCTGCGTCTGGAGCCT
TGAAGGACAGTCGGTGTGTAGAGCTGCTGGTGTTGATGTGCGTCGACGGT
TTTCTGTTTCGCGTGTTTCCGCCGGTTTGTGGGAGAGACAGATAGACACC
TGGTTCGGAAGTCGGAAATCTTGTGACGATGTGTTGTACTTGGTCTGTCT
GTTTTACGTGGCCCTAAGAGACGACAGCCGCACCTCAACACGTTAATATA
ATACTTTCCCCCCTCCTCGGCCTGCTCCCCGGCCGGGGCCGAAATCGACC
TAGTGAGTCCCTCGCGGGCGAACCAGGACACAACAGATAGTAGGCGGGTG
GTGTCCCAAGGTGCAACTCACCGCCGCGCTGGCTCAGCGTGGCGGTGAGG
ATGCACAGACGGTGGTAGTGGCGAGAGGTGTGTATGGACACTGTTCCCGC
GGCAGTAATGCGAAACGGCAAACTGCACCTGGCAACCACCGTCGCGGAAA
GCGTGGCCCACGAAGCTGGAGGAGTAGAGAGAGATTTGTAAACACCACGT
CAGTAAGCACCGCTCGCGGGAGAAGGGAGACGACCGCGGGCACCGCGGGG
AGGGAGTGCTGCACCCTCCTCGTCAAAACACCACAGGCAAGAACCGAGCT
CTGCAGAGATGGATTGATGCGAGGAAACTCGCCGCTCGGAAGATACGGAA
GAAAGCACACCCGCAACGCAAGGTGGACCGAGAGAGAGACGAGACCGCAG
CGGCCGTCAAGGCAGCTGCGAAGAAGAAGGCACGAGAGGGCGACCTATCG
TTCGGCACGTTCAACGTA
back to top

Coding sequence (CDS) from alignment at Scaffold_70:317064..327231-

>EsuBft1029_5a-0001 ID=EsuBft1029_5a-0001|Name=EsuBft1029_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1752bp|location=Sequence derived from alignment at Scaffold_70:317064..327231- (Ectocarpus subulatus male Bft15b)
ATGTCCCTCTCGTCGCGGCCAGCCAGTAGCAGCAGCAGGCAAGCGGGAGA
CTCCAGCAGCAGCAGCAGCTCTCAAGACAGGCAGGATGGATTGCTTCCGG
TCGTTAAGTTCCTGCAGAGCGCGCTTGCCATGAAGGCGAAGGGCGACGGT
CACCACTACCAGCACTTGGTCGCGCAGCTGCTCACCCGGGATGACCCGGA
GACGCTGTGGCGCCTCTACCTCGGACTCTCCCAGTGCGTCACCATCATCT
CGCAGCAACCCGACGAGTTCAAGGAGCTGGTCGATGCCCTCTTCCGGTTC
GACTGGCGAGGAAGCGACAAGATCGTGCAGTCCTTCAGCGGCCTTCTGCA
ACACCTCGTGTCGGCCAACTCCACCTGCATGGTGCCCGCCATGCACATGC
TCGTCAGGAATCTCGTCCTCACCCCCCGGGACCTTGACTGTGAAGGGAAC
GTGGATCCGGCGGCCCTAACTCGGCAGCACAACGTGCACGCGGCGCTTCA
GGCCAGCCTTACCCTCGTCCCCAGCGGCCGGTCCAAGCTGTTCGGCGTGC
TCAAGCAGAACTACCCGCACCGCAGACTAAGGGCGGAGGTTTTGTCCGAC
TACGCTCTGCATGCACTTCGGGTTGTGCAGTACGCCCCGCTCATTGAGGA
GAGTGTCCTGAGGCTGATCATCGAGAAAGGTCTTGAGATCGACGTTGAGA
TTAAGATAATGGACACTGGGGAGGCTGTGGTCGACGACGAGGACGACGAG
TGCGACGCGTTGTTCACCATGGACGACGTCGTAGACGGAACTGCCGACAA
CAAGAAGCAGAGCACCGATGAGGTGGACGAGATGGCCGACAAGCTGGACG
GGGTCATGCTCGTGGTCTTCAACTACCTGGACCAGCGCCTCACAGCGAAC
GCCTCACTGCCGCCGGAGACAATACTGGAAACCTCCGTGGCCGGGGATGG
GGGTTGTGAAGCCGTTGCGGCGGCACAAGCCGTCTTGCAGGGAGACGAGG
CGGGCAGCGACAGTTGTACCCCGAAGGGACGGGGGGGCGGTTCGACGGGA
GGGATGCAAGGGATGGAACCCGTGGCACGACTGTTGAAGTCTCTTCTGGT
GGTCTTCGAGGAGAACATTCTGCCGACACACCGCAGTAAGTTCGTGCAGT
TCGTGCTCTTCTTCGCCTCCGGCCGTGCGCGCGGGCTAGGCTACGCTCTG
GTGTCAAAGCTGGTCGGCGTATTGAAGGATGAGTCTCGGCCGAAGTTGAC
TCGCCAGAGCAGCGTGGCGTACCTTGCCAGCTTTGTGGCGAGAGCTTCCT
TCGTGGACCCCTCGTTGGTGTCCACTGCCGTACAATCGCTCTTGGACTGG
GCAGGGCAGTACCTGGACCAGTACGCCGACGCCTCCATAGCAACGCCGGT
ACAAGCGCTTGGAACTCCGAGCTCGAAGGGGTTCGAGACCCCAGTGGCGA
CCCGCGTCCGGGCGAGGCCACAGTCCTGGCACGGAAACCACCCTCGCCGG
AGCGCTAACGGCGGCGACGGAGGCGGCGGGATGATCGATGCACCGATGTC
CGCGGTGGCCTCGAGGTCGGGGGTCGGGGGCAGCGGCGGGGTGGGCGTCG
GCAGCAAGAGTAGCAGCAGCAGCAAGAGCAGGCCGGCGGACCACATGCTC
TTCTACTCAGTGTGCCAGGCGACTTTCTACGTGATGTGCTTCCGGGGGGA
CGAGCTCGCCGCCATGGAAGGCTTCGACAGCCAGGCATTGCTGAAGAGGT
AG
back to top