Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1026_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 113 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1026_3a-0001 ID=EsuBft1026_3a-0001|Name=EsuBft1026_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1134bp|location=Sequence derived from alignment at Scaffold_385:220121..221254- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCACTTCTGTCCGACATCCCAGTGGGTACACCCACCGGCGTCAACTAATT
TTTTCATGTACCCACTTGTGTCTATTTTTTTACCCACATTTGTCCAAATT
GTACCCACTTGTGTCCACATACGGATGGCGGAAATCGAGCGGAAATTGAC
CTCCACGTCACCGCACGGCAGAACATCGAATAGCCTCGCAACGTCTCAGA
ACCTCCCAACCACGTATCCATGGCATCTTTCGTATCCATGACTGCCGACT
GCGGACCGACCGAGGAGGAACATGTCAGACACATGCCAGGCCCCTCCGGT
ACCGGAACGGGAGGATATCAGGCACAAAAAGATGCCGGCAGTAAGCCCGG
CAAGGAATGCACTATAACAACACACGCCACAAACAAATGCGTGACACACA
ACGGACAACAAAACCAACGGGTCGAACCTACAGGTCGCGCAAACAGAACA
AAACGACGCGCATTGAGCAACAATACTCACACACACGAAAGCATCAACCG
CCACCATGACGAGTGCACACCGACTCGTCACGGCAGCAGTAGGATGTCGA
GGCAGTTTGCTCTGCAGGGCGCTCGCTCAGGGTCAAGCGGGGGTGCACCT
CTGTCAACTGCTGGCGGCGCCATGGTTGAAGAGGCAACTTTTGCGACGTC
ACGTGCCTTCAAACACGCATTCGAGCGCTGCATGATCGCACAGTCTAGGC
AGTGCCGGCTAGACAAGCGGATTATTGGCGGTCGGGGCAAGCTCCACCGC
TGCACGGGAGCAATCGTCAACGGGAAAGCGACATCCGGCTGCCCGGTGCT
TGCGCGGGGGTGCAAGCAAACCGATGGCACCTGGAAGGTGACGGAGGTGG
TCCTCGATCATGTGGCGTGCACCGGCCAGGCCAGTAACAAAAAGCAGCGG
ATCAATCGCCGATGTGTGGAGAGGGAGGCAGCGGCGCTCGTGAGCGCCAA
CCACAGGATCACCTGTCCCTCGCTGGTGAAGACGCTCAAGGCAACCTCCG
GCGTGGATGTCAGCGAGAGGACAGCTAGCAGGATGCGGGCGGACATCCTC
GGCAAGGGAAAGGACGCGATCGCCAAGGAGTACCAACTCCTCCAGAGCTA
CTGCGACCTCCTCGGGAGGGACAACGGCANNNNN back to topprotein sequence of EsuBft1026_3a-0001 >EsuBft1026_3 ID=EsuBft1026_3|Name=EsuBft1026_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=305bp
MASFVSMTADCGPTEEEHVRHMPGPSGTGTGGYQAQKDAGSKPGKECTIT
THATNKCVTHNGQQNQRVEPTGRANRTKRRALSNNTHTHESINRHHDECT
PTRHGSSRMSRQFALQGARSGSSGGAPLSTAGGAMVEEATFATSRAFKHA
FERCMIAQSRQCRLDKRIIGGRGKLHRCTGAIVNGKATSGCPVLARGCKQ
TDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEREAAALVSANHRITCP
SLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGR
DNGXX back to topmRNA from alignment at Scaffold_385:220121..221254- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1026_3a-0001 ID=EsuBft1026_3a-0001|Name=EsuBft1026_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1134bp|location=Sequence derived from alignment at Scaffold_385:220121..221254- (Ectocarpus subulatus male Bft15b)
CCACTTCTGTCCGACATCCCAGTGGGTACACCCACCGGCGTCAACTAATT
TTTTCATGTACCCACTTGTGTCTATTTTTTTACCCACATTTGTCCAAATT
GTACCCACTTGTGTCCACATACGGATGGCGGAAATCGAGCGGAAATTGAC
CTCCACGTCACCGCACGGCAGAACATCGAATAGCCTCGCAACGTCTCAGA
ACCTCCCAACCACGTATCCATGGCATCTTTCGTATCCATGACTGCCGACT
GCGGACCGACCGAGGAGGAACATGTCAGACACATGCCAGGCCCCTCCGGT
ACCGGAACGGGAGGATATCAGGCACAAAAAGATGCCGGCAGTAAGCCCGG
CAAGGAATGCACTATAACAACACACGCCACAAACAAATGCGTGACACACA
ACGGACAACAAAACCAACGGGTCGAACCTACAGGTCGCGCAAACAGAACA
AAACGACGCGCATTGAGCAACAATACTCACACACACGAAAGCATCAACCG
CCACCATGACGAGTGCACACCGACTCGTCACGGCAGCAGTAGGATGTCGA
GGCAGTTTGCTCTGCAGGGCGCTCGCTCAGGGTCAAGCGGGGGTGCACCT
CTGTCAACTGCTGGCGGCGCCATGGTTGAAGAGGCAACTTTTGCGACGTC
ACGTGCCTTCAAACACGCATTCGAGCGCTGCATGATCGCACAGTCTAGGC
AGTGCCGGCTAGACAAGCGGATTATTGGCGGTCGGGGCAAGCTCCACCGC
TGCACGGGAGCAATCGTCAACGGGAAAGCGACATCCGGCTGCCCGGTGCT
TGCGCGGGGGTGCAAGCAAACCGATGGCACCTGGAAGGTGACGGAGGTGG
TCCTCGATCATGTGGCGTGCACCGGCCAGGCCAGTAACAAAAAGCAGCGG
ATCAATCGCCGATGTGTGGAGAGGGAGGCAGCGGCGCTCGTGAGCGCCAA
CCACAGGATCACCTGTCCCTCGCTGGTGAAGACGCTCAAGGCAACCTCCG
GCGTGGATGTCAGCGAGAGGACAGCTAGCAGGATGCGGGCGGACATCCTC
GGCAAGGGAAAGGACGCGATCGCCAAGGAGTACCAACTCCTCCAGAGCTA
CTGCGACCTCCTCGGGAGGGACAACGGCANNNNN back to topCoding sequence (CDS) from alignment at Scaffold_385:220121..221254- >EsuBft1026_3a-0001 ID=EsuBft1026_3a-0001|Name=EsuBft1026_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=915bp|location=Sequence derived from alignment at Scaffold_385:220121..221254- (Ectocarpus subulatus male Bft15b)
ATGGCATCTTTCGTATCCATGACTGCCGACTGCGGACCGACCGAGGAGGA
ACATGTCAGACACATGCCAGGCCCCTCCGGTACCGGAACGGGAGGATATC
AGGCACAAAAAGATGCCGGCAGTAAGCCCGGCAAGGAATGCACTATAACA
ACACACGCCACAAACAAATGCGTGACACACAACGGACAACAAAACCAACG
GGTCGAACCTACAGGTCGCGCAAACAGAACAAAACGACGCGCATTGAGCA
ACAATACTCACACACACGAAAGCATCAACCGCCACCATGACGAGTGCACA
CCGACTCGTCACGGCAGCAGTAGGATGTCGAGGCAGTTTGCTCTGCAGGG
CGCTCGCTCAGGGTCAAGCGGGGGTGCACCTCTGTCAACTGCTGGCGGCG
CCATGGTTGAAGAGGCAACTTTTGCGACGTCACGTGCCTTCAAACACGCA
TTCGAGCGCTGCATGATCGCACAGTCTAGGCAGTGCCGGCTAGACAAGCG
GATTATTGGCGGTCGGGGCAAGCTCCACCGCTGCACGGGAGCAATCGTCA
ACGGGAAAGCGACATCCGGCTGCCCGGTGCTTGCGCGGGGGTGCAAGCAA
ACCGATGGCACCTGGAAGGTGACGGAGGTGGTCCTCGATCATGTGGCGTG
CACCGGCCAGGCCAGTAACAAAAAGCAGCGGATCAATCGCCGATGTGTGG
AGAGGGAGGCAGCGGCGCTCGTGAGCGCCAACCACAGGATCACCTGTCCC
TCGCTGGTGAAGACGCTCAAGGCAACCTCCGGCGTGGATGTCAGCGAGAG
GACAGCTAGCAGGATGCGGGCGGACATCCTCGGCAAGGGAAAGGACGCGA
TCGCCAAGGAGTACCAACTCCTCCAGAGCTACTGCGACCTCCTCGGGAGG
GACAACGGCANNNNN back to top
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