Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1025_2 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Length | 227 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1025_2a-0001 ID=EsuBft1025_2a-0001|Name=EsuBft1025_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2274bp|location=Sequence derived from alignment at Scaffold_38:30325..34744- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGTTTGGAGCAGACGGAAAAGGAACTACTAGACAAGGAACTTAGCAA
AGACTACTTCACGGCAGCTCTTCTTCGCGGGGTACAGCACGTAGATGGGT
TAGGCGCCGGGACGCCCTTCATCACCGCGGGTGACGGCAACTGCCTGTTG
AACGCCGTGGCCCAGCTATTCGCGAAAAAAACCCGCGGGATGGGGAACGA
GATTAAATCCTTGGCGGCGAAGCTACGACTGAGCGTAACCCTCGAGGGGA
TGCGGCACATGGAGGCATACCTCTCTTGTCAAGAGGATTTCTCTATGTGT
TGGTCCATTTACGGGAATGAATTGCGAGAAGGACTGCCTAAGCTGGGGTG
GACCATCGAGGCAGACGCGCACAACAAGCATCGACTGGGGTCTCGTAATT
GTTCCCGGCTGATGTTTGTTGCGCAGCTCAAGCACGTTGCCGGGAATTGT
AACTGGCTGCAGCAGTTCGCCTTCCCGTTGCTGGCGATTGTCATCCAGGT
GCCCCTCCGAGGTTTCGTTCCGTGGCTCTCCCGGCTTCTACTTCCCGATG
GCCCTTTGTACTGCAGACCACAGCCTTACGCCCACATACGGAGCTTCGTG
GACACACACCCTGTTCCAACCGTGTTCACCGTTCGGCCTGGGCGTACACA
CCCAGCAGTTCATGTGGTTATGACGATAATGTCCAGTGCGGACTACCGCT
CTAACTTCAACGACGCGCCTGGTTGGCGGGACCGGAGCGGCGGCGTTCTG
CCGGAGCTCAACCACTTGGTGTCGTTCTCCGGCACTGCCGCCGGAGCGCA
TGCCCTAGCCGTTGCTGCCTTTGCCGATATGGGCACAGCCGCGCGTGAGA
GCTTGGAGAAGGCACAAACCGCAGTGGCACAAGCTGAAGAGGCGCCGGAT
CTGCACGAGACTCGTGTCGCCGAAAAGAGGATCGCTTTGAGGGAGGACGA
AGAGTCCGTGGAGCGGAAGCGGAGGGAAGAGGCGCCTGAGGCCGAGGCGC
GCTCCCGAAGGCGGAAACAACAACAGGGGGCGGCCGACGGAGGGAAGGAG
GGAGAGGGTGGGGGTTCTGGAGTGGGTAGTGCGGGCAAGCTAGCCGGCAG
CGACCACAAGCACAAGCCTGGCGAAACGGGTGGAAGCCAACAAAGTGGGG
GTGCTGGAGATGGCACTGGACATGGACAAGACACCATGGACCACGAGAAG
GGCAGGAACGGTGGAACATGCGGCCCAGAGGAGCCGCGTGGAGGAACCGG
CAAGGGTGGCGACGACGTGTTCGAGGGGGGCAAACGGCAGGCGACCAAGG
ACGGGCTTTCAACGGGTGCGCCGGCAGGGGACTGCGGCGGAGCAACGGAT
ATGGAGATCCGTCAACTACGAAGGAAATCTCATGGGTTTCAGCGGCTCAC
ACTCGCTCGAGAGGGGAGGGGATTCTTCGAGATTGGCGTGGGTACTCGCC
TTCACACAGGAGCATGGGCACCTAGCCCGGCATGGGGGACAGTCATGAGG
GTCAATGCAGACGAAGAAGACAAGATCGTATCGTATGACGTCCTCATGGA
CACGGAGTGTAGGGTGTCAACAGTGTCCGCTCGCAATGTGGAGATTGACG
TGAAGCATGCGAGGGAGGTAGACAAGAGCAGTGCGGGTGCTCCCAGGAAG
TCGGGAAGGCGGGGCGAGGCCGACAACAAAGGCAGGTCCGGAGTGGATGA
GGGGTCGGAGCCCGGGGAGGGCAGGGAGGGCAGGAAGTCAGATGGGCAGA
AAAGGTCGGGGCGTGAAAAGGAAACAGCGAAGGGGAGCAGCAGGAAGGGC
GGGCGCTTTACCGACGATGAGGACCCGGACGGGAAATCGAGCGGAGGTCA
ACGAGGCAACGACAAAAAGAGGAAGAAGGTGGGCGACCCTGATGAAGACG
AGGATTCCGACGATCTTGCCTCCGATTATGAAGACCTTGCCTCCGACTAT
GAAGACGACCACGATGATGAAGACGACCGCGATGGCGAAGACGACAGCAA
TGATGAAGACGACCAACAAGGCGGGATCAAGAAGGTGATCAAGAAGGAGC
AGGAATGTGCCGGCGGTAAGAGCAAGGGCAAAGGGGCGGATGGTGAAACG
GACCAAGACACAGAAGAGGAAACTGGGCTGTGGGGAGACGTAGATGGGGG
AGGAATTGCGCACCTTGGTCGCGCATTCGACGTGAAGGAGTCAGCCTACG
ACACGTGGGAGGCCGCATTTGCCACGGTCATCGGGGAGCTCGAAGAAGAA
GGGCATCTAAACCTTCAAAAGTAG back to topprotein sequence of EsuBft1025_2a-0001 >EsuBft1025_2 ID=EsuBft1025_2|Name=EsuBft1025_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=757bp
MRLEQTEKELLDKELSKDYFTAALLRGVQHVDGLGAGTPFITAGDGNCLL
NAVAQLFAKKTRGMGNEIKSLAAKLRLSVTLEGMRHMEAYLSCQEDFSMC
WSIYGNELREGLPKLGWTIEADAHNKHRLGSRNCSRLMFVAQLKHVAGNC
NWLQQFAFPLLAIVIQVPLRGFVPWLSRLLLPDGPLYCRPQPYAHIRSFV
DTHPVPTVFTVRPGRTHPAVHVVMTIMSSADYRSNFNDAPGWRDRSGGVL
PELNHLVSFSGTAAGAHALAVAAFADMGTAARESLEKAQTAVAQAEEAPD
LHETRVAEKRIALREDEESVERKRREEAPEAEARSRRRKQQQGAADGGKE
GEGGGSGVGSAGKLAGSDHKHKPGETGGSQQSGGAGDGTGHGQDTMDHEK
GRNGGTCGPEEPRGGTGKGGDDVFEGGKRQATKDGLSTGAPAGDCGGATD
MEIRQLRRKSHGFQRLTLAREGRGFFEIGVGTRLHTGAWAPSPAWGTVMR
VNADEEDKIVSYDVLMDTECRVSTVSARNVEIDVKHAREVDKSSAGAPRK
SGRRGEADNKGRSGVDEGSEPGEGREGRKSDGQKRSGREKETAKGSSRKG
GRFTDDEDPDGKSSGGQRGNDKKRKKVGDPDEDEDSDDLASDYEDLASDY
EDDHDDEDDRDGEDDSNDEDDQQGGIKKVIKKEQECAGGKSKGKGADGET
DQDTEEETGLWGDVDGGGIAHLGRAFDVKESAYDTWEAAFATVIGELEEE
GHLNLQK back to topmRNA from alignment at Scaffold_38:30325..34744- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1025_2a-0001 ID=EsuBft1025_2a-0001|Name=EsuBft1025_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4420bp|location=Sequence derived from alignment at Scaffold_38:30325..34744- (Ectocarpus subulatus male Bft15b)
ATGCGTTTGGAGCAGACGGAAAAGGAACTACTAGACAAGGAACTTAGCAA
AGACTACTTCACGGCAGCTCTTCTTCGCGGGGTACAGCACGTAGATGGGT
TAGGCGCCGGGACGCCCTTCATCACCGCGGGTGACGGCAACTGCCTGTTG
AACGCCGTGGCCCAGCTATTCGCGAAAAAAACCCGCGGGATGGGGAACGA
GATTAAATCCTTGGCGGCGAAGCTACGACTGAGCGTAACCCTCGAGGGGA
TGCGGCACATGGAGGCATACCTCTCTTGTCAAGAGGATTTCTCTATGTGT
TGGTCCATTTACGGGAATGAATTGCGAGAAGGACTGCCTAAGCTGGGGTG
GACCATCGAGGCAGACGCGCACAACAAGCATCGACTGGGGTCTCGTAATT
GTTCCCGGCTGATGTTTGTTGCGCAGCTCAAGCACGTTGCCGGGAATTGT
AACTGGCTGCAGCAGTTCGCCTTCCCGTTGCTGGCGATTGTCATCCAGGT
GCCCCTCCGAGGTTTCGTTCCGTGTAAGTGTCATCTCTCCATCGTATACC
GTCTACTACATAGATAACGCCATCGATTGTTCGCCAGTGCCATTTACTCG
GACATGATACTGTTTTCAACGTCACACCAGACGCGGGAAGTCACCCGATG
TGTCCAGTGTCTAGGGTTGGGAAGAGGGCCATTCTGTGGTAGTCAAACTA
CGGAGTTATTTGTCGCAATTGTCTGAAGTGGTTCCTGTGTGGCCTTTGTT
GTGGTGTCTTGTGCCTGTTCTACCGCAACCAATCATGTATGTCACAGTCT
TGTCGGGTGAGCCTGGGTATCTTGACGTTGTGATGGGCCCATTGTTGATG
TGTATGACGCACGTCGTGTGCCACGCGTGATTATCTCCGATTTTTGCCCG
TTATGCTCATGGAGGTCCTTGGGGCGGGAAATGTGTGCGTGTCAGCAGCA
GTGTCACGCAGGGCTCTCCCGGCTTCTACTTCCCGATGGCCCTTTGTACT
GCAGACCACAGCCTTACGCCCACATACGGAGCTTCGTGGACACACACCCT
GTTCCAACCGTGTTCACCGTTCGGCCTGGGCGTACACACCCAGCAGTTCA
TGTGGTTATGACGATAATGTCCAGTGCGGACTACCGCTCTAACTTCAACG
ACGCGCCTGGTTGGCGGGACCGGAGCGGCGGCGTTCTGCCGGAGCTCAAC
CACTTGGTGTCGTTCTCCGGCACTGCCGCCGGAGCGCATGCCCTAGCCGT
TGCTGCCTTTGCCGATATGGGCACAGCCGCGCGTGAGAGCTTGGAGAAGG
CACAAACCGCAGTGGCACAAGCTGAAGAGGCGCCGGATCTGCACGAGACT
CGTGTCGCCGAAAAGAGGATCGCTTTGAGGGAGGTACGAAGAAGGGTTCC
ATGACGTTGGTGTATTTGTCTCTGCTGTTGTGGGTGGCACTGCTTCCACT
TCTTGCGAGACACCTGTCCACTCCATCGCGTGCACGCTTCGTGACCTTTG
GGCGTTTGTCCGTCCTTGCACCTCCAGGCTCGCGACATGTTGAAGATGCA
CGAAGCGAACCACGCACTTCTCACGGGCACCTACTTCGTGAGTTGACTAC
CCGTTCGTGTGTGATCGAATCTAATCCTCCACAATTGCCAAATCCTTGGC
CTAGTTTTCTGGCGGCTAAGTTTGGTTGTGGGCCTTGTCGTGTGTCGTTG
ATGTAGCTATGCATAGATGCCATGATCAGCACGGCTACTTGCCACCGATC
GAGGAAACTTGGAGCGTTTGTTTGTCCAAACAGAACTCCCGATGACAACC
ATGTGCGGCCGCCATCAGGTCCCATTGGCTTCAACAGGGGCGGCGGCTAA
CGCCAAACAGGAAGCCCACAACAAATGCTTGGTGAGACCCTGGGTTGCGG
CACAGGTGCCGATATTCCAGTGTACCTTTCGATGCAGCAGACATTGAGGA
TAACGTCGCTATGTTGCCGCGCAGGGGCCGAGATTCCATCCTACCTTTTG
AACGTTGGAAGAAGCAAAAAGCGAGGAATTCGTGGCCACTAAGAATGCAA
GTGGAGTCTCCAATCACTCGCTTGCGCGGTCATGTTCGTGCGTTCCTTAC
AATCATCCTCAGGACGAAGAGTCCGTGGAGCGGAAGCGGAGGGAAGAGGC
GCCTGAGGCCGAGGCGCGCTCCCGAAGGCGGAAACAACAACAGGGGGCGG
CCGACGGAGGGAAGGAGGGAGAGGGTGGGGGTTCTGGAGTGGGTAGTGCG
GGCAAGCTAGCCGGCAGCGACCACAAGCACAAGCCTGGCGAAACGGGTGG
AAGCCAACAAAGTGGGGGTGCTGGAGATGGCACTGGACATGGACAAGACA
CCATGGACCACGAGAAGGGCAGGAACGGTGGAACATGCGGCCCAGAGGAG
CCGCGTGGAGGAACCGGCAAGGGTGGCGACGACGTGTTCGAGGGGGGCAA
ACGGCAGGCGACCAAGGACGGGCTTTCAACGGGTGCGCCGGCAGGGGACT
GCGGCGGAGCAACGGATATGGAGATCCGTCAACTACGAAGGAAATCTCAT
GGGTTTCAGCGGCTCACACTCGCTCGAGAGGGGAGGGTGAGTGGAAGGTT
CATCAGTGCCCCCCCGCTACGTGAAGTGGTATCGGCTTCATCGAGTATCA
TGAACGGCATAAATCGGAGCGCTTGCAGCTTGCGAATCCACCCTAACCGC
AGGGAGGGGACCCCCTCCCCTTCCCATCCTGTGTGACCCCGGTTGGGTCG
TCTAGGTTGTCGTAGTGGAGGACGGGGGCCAGTGGGACGACATAAGTCAT
TATTGGGAGTAAACGACAAATGAAGGATAAATAACGAAATAACAGATGAA
CGTGCTGCGTAGACGCTTGTGTACATTCCTATTAGGAGGAAACCAGAACG
GTATCTGACATCGGCATGTACTTGTTGATGTGCCCGATACCTGTTTGTGT
TGTGTGTGTAGACGGTCCTCCTCTCTTTGGCTATTTTTCAACGGCGATTT
TACACGGTGTTGATTAGAATTTCGAATTTTCGTGTTGTTTTGCAAGCCCA
AGACTTCTTCTCTTCGTCGCTCCCCCCCCTTCGAGTCAGCGACGCCAGCC
CTGAGGATACGCACTGAAGGAACGATCAGCGTTCGTGCGTGCTCGTACGA
AGTCCGTCCCCCGATGCGAAACACCGCCTGTTGCTGCATGCATGCGCCAT
CCTTGCAGGGATTCTTCGAGATTGGCGTGGGTACTCGCCTTCACACAGGA
GCATGGGCACCTAGCCCGGCATGGGGGACAGTCATGAGGGTCAATGCAGA
CGAAGAAGACAAGATCGTATCGTATGACGTCCTCATGGACACGGAGTGTA
GGGTGTCAACAGTGTCCGCTCGCAATGTGGAGATTGACGTGAAGCATGCG
AGGGAGGTAGACAAGAGCAGTGCGGGTGCTCCCAGGAAGTCGGGAAGGCG
GGGCGAGGCCGACAACAAAGGCAGGTCCGGAGTGGATGAGGGGTCGGAGC
CCGGGGAGGGCAGGGAGGGCAGGAAGTCAGATGGGCAGAAAAGGTCGGGG
CGTGAAAAGGAAACAGCGAAGGGGAGCAGCAGGAAGGGCGGGCGCTTTAC
CGACGATGAGGACCCGGACGGGAAATCGAGCGGAGGTCAACGAGGCAACG
ACAAAAAGGTGAGACAGGCTTGCTGCGGTCACTAACTTTGAATGGCAAGT
GATGGAGGCACACGGTAAAGCCGCTGCGATGCCGTATGATACACCCATTG
TCATCCGAGCGCGTCTTGTTTCTACGCAAGGGGGAGGGGTAATGCTGTCG
ACCATTGTTGATGGCTTTGTGGTTGTGTCCATTTCCCCGCTTTGTTGGTG
TGCAGAGGAAGAAGGTGGGCGACCCTGATGAAGACGAGGATTCCGACGAT
CTTGCCTCCGATTATGAAGACCTTGCCTCCGACTATGAAGACGACCACGA
TGATGAAGACGACCGCGATGGCGAAGACGACAGCAATGATGAAGACGACC
AACAAGGCGGGATCAAGAAGGTGATCAAGAAGGTAAGCCCCGCTTGCGGC
GGCCCGAACGTTTGCACTCGGAATGGACTAGGCAATACCAGTCCCGACAA
CGTATTTGGTCGGCTTGAGGTCTCTGAGCTTCGTCTGAGCTTGTGATTGG
ACTGCGCAATCTCGCGGCCCTTTGATGCGGTGGCGTATGCAGGAGCAGGA
ATGTGCCGGCGGTAAGAGCAAGGGCAAAGGGGCGGATGGTGAAACGGACC
AAGACACAGAAGAGGAAACTGGGCTGTGGGGAGACGTAGATGGGGGAGGA
ATTGCGCACCTTGGTCGCGCATTCGACGTGAAGGAGTCAGCCTACGACAC
GTGGGAGGCCGCATTTGCCACGGTCATCGGGGAGCTCGAAGAAGAAGGGC
ATCTAAACCTTCAAAAGTAG back to topCoding sequence (CDS) from alignment at Scaffold_38:30325..34744- >EsuBft1025_2a-0001 ID=EsuBft1025_2a-0001|Name=EsuBft1025_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2274bp|location=Sequence derived from alignment at Scaffold_38:30325..34744- (Ectocarpus subulatus male Bft15b)
ATGCGTTTGGAGCAGACGGAAAAGGAACTACTAGACAAGGAACTTAGCAA
AGACTACTTCACGGCAGCTCTTCTTCGCGGGGTACAGCACGTAGATGGGT
TAGGCGCCGGGACGCCCTTCATCACCGCGGGTGACGGCAACTGCCTGTTG
AACGCCGTGGCCCAGCTATTCGCGAAAAAAACCCGCGGGATGGGGAACGA
GATTAAATCCTTGGCGGCGAAGCTACGACTGAGCGTAACCCTCGAGGGGA
TGCGGCACATGGAGGCATACCTCTCTTGTCAAGAGGATTTCTCTATGTGT
TGGTCCATTTACGGGAATGAATTGCGAGAAGGACTGCCTAAGCTGGGGTG
GACCATCGAGGCAGACGCGCACAACAAGCATCGACTGGGGTCTCGTAATT
GTTCCCGGCTGATGTTTGTTGCGCAGCTCAAGCACGTTGCCGGGAATTGT
AACTGGCTGCAGCAGTTCGCCTTCCCGTTGCTGGCGATTGTCATCCAGGT
GCCCCTCCGAGGTTTCGTTCCGTGGCTCTCCCGGCTTCTACTTCCCGATG
GCCCTTTGTACTGCAGACCACAGCCTTACGCCCACATACGGAGCTTCGTG
GACACACACCCTGTTCCAACCGTGTTCACCGTTCGGCCTGGGCGTACACA
CCCAGCAGTTCATGTGGTTATGACGATAATGTCCAGTGCGGACTACCGCT
CTAACTTCAACGACGCGCCTGGTTGGCGGGACCGGAGCGGCGGCGTTCTG
CCGGAGCTCAACCACTTGGTGTCGTTCTCCGGCACTGCCGCCGGAGCGCA
TGCCCTAGCCGTTGCTGCCTTTGCCGATATGGGCACAGCCGCGCGTGAGA
GCTTGGAGAAGGCACAAACCGCAGTGGCACAAGCTGAAGAGGCGCCGGAT
CTGCACGAGACTCGTGTCGCCGAAAAGAGGATCGCTTTGAGGGAGGACGA
AGAGTCCGTGGAGCGGAAGCGGAGGGAAGAGGCGCCTGAGGCCGAGGCGC
GCTCCCGAAGGCGGAAACAACAACAGGGGGCGGCCGACGGAGGGAAGGAG
GGAGAGGGTGGGGGTTCTGGAGTGGGTAGTGCGGGCAAGCTAGCCGGCAG
CGACCACAAGCACAAGCCTGGCGAAACGGGTGGAAGCCAACAAAGTGGGG
GTGCTGGAGATGGCACTGGACATGGACAAGACACCATGGACCACGAGAAG
GGCAGGAACGGTGGAACATGCGGCCCAGAGGAGCCGCGTGGAGGAACCGG
CAAGGGTGGCGACGACGTGTTCGAGGGGGGCAAACGGCAGGCGACCAAGG
ACGGGCTTTCAACGGGTGCGCCGGCAGGGGACTGCGGCGGAGCAACGGAT
ATGGAGATCCGTCAACTACGAAGGAAATCTCATGGGTTTCAGCGGCTCAC
ACTCGCTCGAGAGGGGAGGGGATTCTTCGAGATTGGCGTGGGTACTCGCC
TTCACACAGGAGCATGGGCACCTAGCCCGGCATGGGGGACAGTCATGAGG
GTCAATGCAGACGAAGAAGACAAGATCGTATCGTATGACGTCCTCATGGA
CACGGAGTGTAGGGTGTCAACAGTGTCCGCTCGCAATGTGGAGATTGACG
TGAAGCATGCGAGGGAGGTAGACAAGAGCAGTGCGGGTGCTCCCAGGAAG
TCGGGAAGGCGGGGCGAGGCCGACAACAAAGGCAGGTCCGGAGTGGATGA
GGGGTCGGAGCCCGGGGAGGGCAGGGAGGGCAGGAAGTCAGATGGGCAGA
AAAGGTCGGGGCGTGAAAAGGAAACAGCGAAGGGGAGCAGCAGGAAGGGC
GGGCGCTTTACCGACGATGAGGACCCGGACGGGAAATCGAGCGGAGGTCA
ACGAGGCAACGACAAAAAGAGGAAGAAGGTGGGCGACCCTGATGAAGACG
AGGATTCCGACGATCTTGCCTCCGATTATGAAGACCTTGCCTCCGACTAT
GAAGACGACCACGATGATGAAGACGACCGCGATGGCGAAGACGACAGCAA
TGATGAAGACGACCAACAAGGCGGGATCAAGAAGGTGATCAAGAAGGAGC
AGGAATGTGCCGGCGGTAAGAGCAAGGGCAAAGGGGCGGATGGTGAAACG
GACCAAGACACAGAAGAGGAAACTGGGCTGTGGGGAGACGTAGATGGGGG
AGGAATTGCGCACCTTGGTCGCGCATTCGACGTGAAGGAGTCAGCCTACG
ACACGTGGGAGGCCGCATTTGCCACGGTCATCGGGGAGCTCGAAGAAGAA
GGGCATCTAAACCTTCAAAAGTAG back to top
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