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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | EsuBft1025_2 |
Protein domains | Coil |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 6 |
Length | 227 |
Hectar predicted targeting category | other localisation |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1025_2a-0001 ID=EsuBft1025_2a-0001|Name=EsuBft1025_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2274bp|location=Sequence derived from alignment at Scaffold_38:30325..34744- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCGTTTGGAGCAGACGGAAAAGGAACTACTAGACAAGGAACTTAGCAA AGACTACTTCACGGCAGCTCTTCTTCGCGGGGTACAGCACGTAGATGGGT TAGGCGCCGGGACGCCCTTCATCACCGCGGGTGACGGCAACTGCCTGTTG AACGCCGTGGCCCAGCTATTCGCGAAAAAAACCCGCGGGATGGGGAACGA GATTAAATCCTTGGCGGCGAAGCTACGACTGAGCGTAACCCTCGAGGGGA TGCGGCACATGGAGGCATACCTCTCTTGTCAAGAGGATTTCTCTATGTGT TGGTCCATTTACGGGAATGAATTGCGAGAAGGACTGCCTAAGCTGGGGTG GACCATCGAGGCAGACGCGCACAACAAGCATCGACTGGGGTCTCGTAATT GTTCCCGGCTGATGTTTGTTGCGCAGCTCAAGCACGTTGCCGGGAATTGT AACTGGCTGCAGCAGTTCGCCTTCCCGTTGCTGGCGATTGTCATCCAGGT GCCCCTCCGAGGTTTCGTTCCGTGGCTCTCCCGGCTTCTACTTCCCGATG GCCCTTTGTACTGCAGACCACAGCCTTACGCCCACATACGGAGCTTCGTG GACACACACCCTGTTCCAACCGTGTTCACCGTTCGGCCTGGGCGTACACA CCCAGCAGTTCATGTGGTTATGACGATAATGTCCAGTGCGGACTACCGCT CTAACTTCAACGACGCGCCTGGTTGGCGGGACCGGAGCGGCGGCGTTCTG CCGGAGCTCAACCACTTGGTGTCGTTCTCCGGCACTGCCGCCGGAGCGCA TGCCCTAGCCGTTGCTGCCTTTGCCGATATGGGCACAGCCGCGCGTGAGA GCTTGGAGAAGGCACAAACCGCAGTGGCACAAGCTGAAGAGGCGCCGGAT CTGCACGAGACTCGTGTCGCCGAAAAGAGGATCGCTTTGAGGGAGGACGA AGAGTCCGTGGAGCGGAAGCGGAGGGAAGAGGCGCCTGAGGCCGAGGCGC GCTCCCGAAGGCGGAAACAACAACAGGGGGCGGCCGACGGAGGGAAGGAG GGAGAGGGTGGGGGTTCTGGAGTGGGTAGTGCGGGCAAGCTAGCCGGCAG CGACCACAAGCACAAGCCTGGCGAAACGGGTGGAAGCCAACAAAGTGGGG GTGCTGGAGATGGCACTGGACATGGACAAGACACCATGGACCACGAGAAG GGCAGGAACGGTGGAACATGCGGCCCAGAGGAGCCGCGTGGAGGAACCGG CAAGGGTGGCGACGACGTGTTCGAGGGGGGCAAACGGCAGGCGACCAAGG ACGGGCTTTCAACGGGTGCGCCGGCAGGGGACTGCGGCGGAGCAACGGAT ATGGAGATCCGTCAACTACGAAGGAAATCTCATGGGTTTCAGCGGCTCAC ACTCGCTCGAGAGGGGAGGGGATTCTTCGAGATTGGCGTGGGTACTCGCC TTCACACAGGAGCATGGGCACCTAGCCCGGCATGGGGGACAGTCATGAGG GTCAATGCAGACGAAGAAGACAAGATCGTATCGTATGACGTCCTCATGGA CACGGAGTGTAGGGTGTCAACAGTGTCCGCTCGCAATGTGGAGATTGACG TGAAGCATGCGAGGGAGGTAGACAAGAGCAGTGCGGGTGCTCCCAGGAAG TCGGGAAGGCGGGGCGAGGCCGACAACAAAGGCAGGTCCGGAGTGGATGA GGGGTCGGAGCCCGGGGAGGGCAGGGAGGGCAGGAAGTCAGATGGGCAGA AAAGGTCGGGGCGTGAAAAGGAAACAGCGAAGGGGAGCAGCAGGAAGGGC GGGCGCTTTACCGACGATGAGGACCCGGACGGGAAATCGAGCGGAGGTCA ACGAGGCAACGACAAAAAGAGGAAGAAGGTGGGCGACCCTGATGAAGACG AGGATTCCGACGATCTTGCCTCCGATTATGAAGACCTTGCCTCCGACTAT GAAGACGACCACGATGATGAAGACGACCGCGATGGCGAAGACGACAGCAA TGATGAAGACGACCAACAAGGCGGGATCAAGAAGGTGATCAAGAAGGAGC AGGAATGTGCCGGCGGTAAGAGCAAGGGCAAAGGGGCGGATGGTGAAACG GACCAAGACACAGAAGAGGAAACTGGGCTGTGGGGAGACGTAGATGGGGG AGGAATTGCGCACCTTGGTCGCGCATTCGACGTGAAGGAGTCAGCCTACG ACACGTGGGAGGCCGCATTTGCCACGGTCATCGGGGAGCTCGAAGAAGAA GGGCATCTAAACCTTCAAAAGTAG back to topprotein sequence of EsuBft1025_2a-0001 >EsuBft1025_2 ID=EsuBft1025_2|Name=EsuBft1025_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=757bp
MRLEQTEKELLDKELSKDYFTAALLRGVQHVDGLGAGTPFITAGDGNCLL NAVAQLFAKKTRGMGNEIKSLAAKLRLSVTLEGMRHMEAYLSCQEDFSMC WSIYGNELREGLPKLGWTIEADAHNKHRLGSRNCSRLMFVAQLKHVAGNC NWLQQFAFPLLAIVIQVPLRGFVPWLSRLLLPDGPLYCRPQPYAHIRSFV DTHPVPTVFTVRPGRTHPAVHVVMTIMSSADYRSNFNDAPGWRDRSGGVL PELNHLVSFSGTAAGAHALAVAAFADMGTAARESLEKAQTAVAQAEEAPD LHETRVAEKRIALREDEESVERKRREEAPEAEARSRRRKQQQGAADGGKE GEGGGSGVGSAGKLAGSDHKHKPGETGGSQQSGGAGDGTGHGQDTMDHEK GRNGGTCGPEEPRGGTGKGGDDVFEGGKRQATKDGLSTGAPAGDCGGATD MEIRQLRRKSHGFQRLTLAREGRGFFEIGVGTRLHTGAWAPSPAWGTVMR VNADEEDKIVSYDVLMDTECRVSTVSARNVEIDVKHAREVDKSSAGAPRK SGRRGEADNKGRSGVDEGSEPGEGREGRKSDGQKRSGREKETAKGSSRKG GRFTDDEDPDGKSSGGQRGNDKKRKKVGDPDEDEDSDDLASDYEDLASDY EDDHDDEDDRDGEDDSNDEDDQQGGIKKVIKKEQECAGGKSKGKGADGET DQDTEEETGLWGDVDGGGIAHLGRAFDVKESAYDTWEAAFATVIGELEEE GHLNLQK back to topmRNA from alignment at Scaffold_38:30325..34744- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1025_2a-0001 ID=EsuBft1025_2a-0001|Name=EsuBft1025_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4420bp|location=Sequence derived from alignment at Scaffold_38:30325..34744- (Ectocarpus subulatus male Bft15b) ATGCGTTTGGAGCAGACGGAAAAGGAACTACTAGACAAGGAACTTAGCAA
AGACTACTTCACGGCAGCTCTTCTTCGCGGGGTACAGCACGTAGATGGGT
TAGGCGCCGGGACGCCCTTCATCACCGCGGGTGACGGCAACTGCCTGTTG
AACGCCGTGGCCCAGCTATTCGCGAAAAAAACCCGCGGGATGGGGAACGA
GATTAAATCCTTGGCGGCGAAGCTACGACTGAGCGTAACCCTCGAGGGGA
TGCGGCACATGGAGGCATACCTCTCTTGTCAAGAGGATTTCTCTATGTGT
TGGTCCATTTACGGGAATGAATTGCGAGAAGGACTGCCTAAGCTGGGGTG
GACCATCGAGGCAGACGCGCACAACAAGCATCGACTGGGGTCTCGTAATT
GTTCCCGGCTGATGTTTGTTGCGCAGCTCAAGCACGTTGCCGGGAATTGT
AACTGGCTGCAGCAGTTCGCCTTCCCGTTGCTGGCGATTGTCATCCAGGT
GCCCCTCCGAGGTTTCGTTCCGTGTAAGTGTCATCTCTCCATCGTATACC
GTCTACTACATAGATAACGCCATCGATTGTTCGCCAGTGCCATTTACTCG
GACATGATACTGTTTTCAACGTCACACCAGACGCGGGAAGTCACCCGATG
TGTCCAGTGTCTAGGGTTGGGAAGAGGGCCATTCTGTGGTAGTCAAACTA
CGGAGTTATTTGTCGCAATTGTCTGAAGTGGTTCCTGTGTGGCCTTTGTT
GTGGTGTCTTGTGCCTGTTCTACCGCAACCAATCATGTATGTCACAGTCT
TGTCGGGTGAGCCTGGGTATCTTGACGTTGTGATGGGCCCATTGTTGATG
TGTATGACGCACGTCGTGTGCCACGCGTGATTATCTCCGATTTTTGCCCG
TTATGCTCATGGAGGTCCTTGGGGCGGGAAATGTGTGCGTGTCAGCAGCA
GTGTCACGCAGGGCTCTCCCGGCTTCTACTTCCCGATGGCCCTTTGTACT
GCAGACCACAGCCTTACGCCCACATACGGAGCTTCGTGGACACACACCCT
GTTCCAACCGTGTTCACCGTTCGGCCTGGGCGTACACACCCAGCAGTTCA
TGTGGTTATGACGATAATGTCCAGTGCGGACTACCGCTCTAACTTCAACG
ACGCGCCTGGTTGGCGGGACCGGAGCGGCGGCGTTCTGCCGGAGCTCAAC
CACTTGGTGTCGTTCTCCGGCACTGCCGCCGGAGCGCATGCCCTAGCCGT
TGCTGCCTTTGCCGATATGGGCACAGCCGCGCGTGAGAGCTTGGAGAAGG
CACAAACCGCAGTGGCACAAGCTGAAGAGGCGCCGGATCTGCACGAGACT
CGTGTCGCCGAAAAGAGGATCGCTTTGAGGGAGGTACGAAGAAGGGTTCC
ATGACGTTGGTGTATTTGTCTCTGCTGTTGTGGGTGGCACTGCTTCCACT
TCTTGCGAGACACCTGTCCACTCCATCGCGTGCACGCTTCGTGACCTTTG
GGCGTTTGTCCGTCCTTGCACCTCCAGGCTCGCGACATGTTGAAGATGCA
CGAAGCGAACCACGCACTTCTCACGGGCACCTACTTCGTGAGTTGACTAC
CCGTTCGTGTGTGATCGAATCTAATCCTCCACAATTGCCAAATCCTTGGC
CTAGTTTTCTGGCGGCTAAGTTTGGTTGTGGGCCTTGTCGTGTGTCGTTG
ATGTAGCTATGCATAGATGCCATGATCAGCACGGCTACTTGCCACCGATC
GAGGAAACTTGGAGCGTTTGTTTGTCCAAACAGAACTCCCGATGACAACC
ATGTGCGGCCGCCATCAGGTCCCATTGGCTTCAACAGGGGCGGCGGCTAA
CGCCAAACAGGAAGCCCACAACAAATGCTTGGTGAGACCCTGGGTTGCGG
CACAGGTGCCGATATTCCAGTGTACCTTTCGATGCAGCAGACATTGAGGA
TAACGTCGCTATGTTGCCGCGCAGGGGCCGAGATTCCATCCTACCTTTTG
AACGTTGGAAGAAGCAAAAAGCGAGGAATTCGTGGCCACTAAGAATGCAA
GTGGAGTCTCCAATCACTCGCTTGCGCGGTCATGTTCGTGCGTTCCTTAC
AATCATCCTCAGGACGAAGAGTCCGTGGAGCGGAAGCGGAGGGAAGAGGC
GCCTGAGGCCGAGGCGCGCTCCCGAAGGCGGAAACAACAACAGGGGGCGG
CCGACGGAGGGAAGGAGGGAGAGGGTGGGGGTTCTGGAGTGGGTAGTGCG
GGCAAGCTAGCCGGCAGCGACCACAAGCACAAGCCTGGCGAAACGGGTGG
AAGCCAACAAAGTGGGGGTGCTGGAGATGGCACTGGACATGGACAAGACA
CCATGGACCACGAGAAGGGCAGGAACGGTGGAACATGCGGCCCAGAGGAG
CCGCGTGGAGGAACCGGCAAGGGTGGCGACGACGTGTTCGAGGGGGGCAA
ACGGCAGGCGACCAAGGACGGGCTTTCAACGGGTGCGCCGGCAGGGGACT
GCGGCGGAGCAACGGATATGGAGATCCGTCAACTACGAAGGAAATCTCAT
GGGTTTCAGCGGCTCACACTCGCTCGAGAGGGGAGGGTGAGTGGAAGGTT
CATCAGTGCCCCCCCGCTACGTGAAGTGGTATCGGCTTCATCGAGTATCA
TGAACGGCATAAATCGGAGCGCTTGCAGCTTGCGAATCCACCCTAACCGC
AGGGAGGGGACCCCCTCCCCTTCCCATCCTGTGTGACCCCGGTTGGGTCG
TCTAGGTTGTCGTAGTGGAGGACGGGGGCCAGTGGGACGACATAAGTCAT
TATTGGGAGTAAACGACAAATGAAGGATAAATAACGAAATAACAGATGAA
CGTGCTGCGTAGACGCTTGTGTACATTCCTATTAGGAGGAAACCAGAACG
GTATCTGACATCGGCATGTACTTGTTGATGTGCCCGATACCTGTTTGTGT
TGTGTGTGTAGACGGTCCTCCTCTCTTTGGCTATTTTTCAACGGCGATTT
TACACGGTGTTGATTAGAATTTCGAATTTTCGTGTTGTTTTGCAAGCCCA
AGACTTCTTCTCTTCGTCGCTCCCCCCCCTTCGAGTCAGCGACGCCAGCC
CTGAGGATACGCACTGAAGGAACGATCAGCGTTCGTGCGTGCTCGTACGA
AGTCCGTCCCCCGATGCGAAACACCGCCTGTTGCTGCATGCATGCGCCAT
CCTTGCAGGGATTCTTCGAGATTGGCGTGGGTACTCGCCTTCACACAGGA
GCATGGGCACCTAGCCCGGCATGGGGGACAGTCATGAGGGTCAATGCAGA
CGAAGAAGACAAGATCGTATCGTATGACGTCCTCATGGACACGGAGTGTA
GGGTGTCAACAGTGTCCGCTCGCAATGTGGAGATTGACGTGAAGCATGCG
AGGGAGGTAGACAAGAGCAGTGCGGGTGCTCCCAGGAAGTCGGGAAGGCG
GGGCGAGGCCGACAACAAAGGCAGGTCCGGAGTGGATGAGGGGTCGGAGC
CCGGGGAGGGCAGGGAGGGCAGGAAGTCAGATGGGCAGAAAAGGTCGGGG
CGTGAAAAGGAAACAGCGAAGGGGAGCAGCAGGAAGGGCGGGCGCTTTAC
CGACGATGAGGACCCGGACGGGAAATCGAGCGGAGGTCAACGAGGCAACG
ACAAAAAGGTGAGACAGGCTTGCTGCGGTCACTAACTTTGAATGGCAAGT
GATGGAGGCACACGGTAAAGCCGCTGCGATGCCGTATGATACACCCATTG
TCATCCGAGCGCGTCTTGTTTCTACGCAAGGGGGAGGGGTAATGCTGTCG
ACCATTGTTGATGGCTTTGTGGTTGTGTCCATTTCCCCGCTTTGTTGGTG
TGCAGAGGAAGAAGGTGGGCGACCCTGATGAAGACGAGGATTCCGACGAT
CTTGCCTCCGATTATGAAGACCTTGCCTCCGACTATGAAGACGACCACGA
TGATGAAGACGACCGCGATGGCGAAGACGACAGCAATGATGAAGACGACC
AACAAGGCGGGATCAAGAAGGTGATCAAGAAGGTAAGCCCCGCTTGCGGC
GGCCCGAACGTTTGCACTCGGAATGGACTAGGCAATACCAGTCCCGACAA
CGTATTTGGTCGGCTTGAGGTCTCTGAGCTTCGTCTGAGCTTGTGATTGG
ACTGCGCAATCTCGCGGCCCTTTGATGCGGTGGCGTATGCAGGAGCAGGA
ATGTGCCGGCGGTAAGAGCAAGGGCAAAGGGGCGGATGGTGAAACGGACC
AAGACACAGAAGAGGAAACTGGGCTGTGGGGAGACGTAGATGGGGGAGGA
ATTGCGCACCTTGGTCGCGCATTCGACGTGAAGGAGTCAGCCTACGACAC
GTGGGAGGCCGCATTTGCCACGGTCATCGGGGAGCTCGAAGAAGAAGGGC
ATCTAAACCTTCAAAAGTAG back to topCoding sequence (CDS) from alignment at Scaffold_38:30325..34744- >EsuBft1025_2a-0001 ID=EsuBft1025_2a-0001|Name=EsuBft1025_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2274bp|location=Sequence derived from alignment at Scaffold_38:30325..34744- (Ectocarpus subulatus male Bft15b) ATGCGTTTGGAGCAGACGGAAAAGGAACTACTAGACAAGGAACTTAGCAA AGACTACTTCACGGCAGCTCTTCTTCGCGGGGTACAGCACGTAGATGGGT TAGGCGCCGGGACGCCCTTCATCACCGCGGGTGACGGCAACTGCCTGTTG AACGCCGTGGCCCAGCTATTCGCGAAAAAAACCCGCGGGATGGGGAACGA GATTAAATCCTTGGCGGCGAAGCTACGACTGAGCGTAACCCTCGAGGGGA TGCGGCACATGGAGGCATACCTCTCTTGTCAAGAGGATTTCTCTATGTGT TGGTCCATTTACGGGAATGAATTGCGAGAAGGACTGCCTAAGCTGGGGTG GACCATCGAGGCAGACGCGCACAACAAGCATCGACTGGGGTCTCGTAATT GTTCCCGGCTGATGTTTGTTGCGCAGCTCAAGCACGTTGCCGGGAATTGT AACTGGCTGCAGCAGTTCGCCTTCCCGTTGCTGGCGATTGTCATCCAGGT GCCCCTCCGAGGTTTCGTTCCGTGGCTCTCCCGGCTTCTACTTCCCGATG GCCCTTTGTACTGCAGACCACAGCCTTACGCCCACATACGGAGCTTCGTG GACACACACCCTGTTCCAACCGTGTTCACCGTTCGGCCTGGGCGTACACA CCCAGCAGTTCATGTGGTTATGACGATAATGTCCAGTGCGGACTACCGCT CTAACTTCAACGACGCGCCTGGTTGGCGGGACCGGAGCGGCGGCGTTCTG CCGGAGCTCAACCACTTGGTGTCGTTCTCCGGCACTGCCGCCGGAGCGCA TGCCCTAGCCGTTGCTGCCTTTGCCGATATGGGCACAGCCGCGCGTGAGA GCTTGGAGAAGGCACAAACCGCAGTGGCACAAGCTGAAGAGGCGCCGGAT CTGCACGAGACTCGTGTCGCCGAAAAGAGGATCGCTTTGAGGGAGGACGA AGAGTCCGTGGAGCGGAAGCGGAGGGAAGAGGCGCCTGAGGCCGAGGCGC GCTCCCGAAGGCGGAAACAACAACAGGGGGCGGCCGACGGAGGGAAGGAG GGAGAGGGTGGGGGTTCTGGAGTGGGTAGTGCGGGCAAGCTAGCCGGCAG CGACCACAAGCACAAGCCTGGCGAAACGGGTGGAAGCCAACAAAGTGGGG GTGCTGGAGATGGCACTGGACATGGACAAGACACCATGGACCACGAGAAG GGCAGGAACGGTGGAACATGCGGCCCAGAGGAGCCGCGTGGAGGAACCGG CAAGGGTGGCGACGACGTGTTCGAGGGGGGCAAACGGCAGGCGACCAAGG ACGGGCTTTCAACGGGTGCGCCGGCAGGGGACTGCGGCGGAGCAACGGAT ATGGAGATCCGTCAACTACGAAGGAAATCTCATGGGTTTCAGCGGCTCAC ACTCGCTCGAGAGGGGAGGGGATTCTTCGAGATTGGCGTGGGTACTCGCC TTCACACAGGAGCATGGGCACCTAGCCCGGCATGGGGGACAGTCATGAGG GTCAATGCAGACGAAGAAGACAAGATCGTATCGTATGACGTCCTCATGGA CACGGAGTGTAGGGTGTCAACAGTGTCCGCTCGCAATGTGGAGATTGACG TGAAGCATGCGAGGGAGGTAGACAAGAGCAGTGCGGGTGCTCCCAGGAAG TCGGGAAGGCGGGGCGAGGCCGACAACAAAGGCAGGTCCGGAGTGGATGA GGGGTCGGAGCCCGGGGAGGGCAGGGAGGGCAGGAAGTCAGATGGGCAGA AAAGGTCGGGGCGTGAAAAGGAAACAGCGAAGGGGAGCAGCAGGAAGGGC GGGCGCTTTACCGACGATGAGGACCCGGACGGGAAATCGAGCGGAGGTCA ACGAGGCAACGACAAAAAGAGGAAGAAGGTGGGCGACCCTGATGAAGACG AGGATTCCGACGATCTTGCCTCCGATTATGAAGACCTTGCCTCCGACTAT GAAGACGACCACGATGATGAAGACGACCGCGATGGCGAAGACGACAGCAA TGATGAAGACGACCAACAAGGCGGGATCAAGAAGGTGATCAAGAAGGAGC AGGAATGTGCCGGCGGTAAGAGCAAGGGCAAAGGGGCGGATGGTGAAACG GACCAAGACACAGAAGAGGAAACTGGGCTGTGGGGAGACGTAGATGGGGG AGGAATTGCGCACCTTGGTCGCGCATTCGACGTGAAGGAGTCAGCCTACG ACACGTGGGAGGCCGCATTTGCCACGGTCATCGGGGAGCTCGAAGAAGAA GGGCATCTAAACCTTCAAAAGTAG back to top
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