EsuBft1015_11a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft1015_11a-0001
Unique Name	EsuBft1015_11a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_544:244751..249088+
coding sequence from alignment at Scaffold_544:244751..249088+

spliced messenger RNA

>EsuBft1015_11a-0001 ID=EsuBft1015_11a-0001|Name=EsuBft1015_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3776bp|location=Sequence derived from alignment at Scaffold_544:244751..249088+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTGGTAATGGATTTGCTTTATCTGCGCAGAACCCGCTTTCCCGTTTTGGT
AGAGAGAAGTTTTGGGCCGACAGCGGTGCGACGAACACTTTTGTGAGCAG
TAGTCATCAAATGTTCGACTTGAGGCCAGTGCCGACAGGCAAAGAGTACA
TTCAGGTTGGCAACGGTGCCTATTTGCGCGTACAATGTGTGGGGAAGGTC
AACATGGCTTTCCACATGCAAGACCAGAGAGGAGAGCGTGATTTTTGCGT
GCAAACGTCGGACGTGTATGTTGTGCCCGGAATCACTTTCAATTTTTTTT
CGTTGCACCACACGCAGCGTAGGCAACGGATCGTCCTTGACGAGACAGGT
GTACATCTCTTTGTTGGTAGACTTTCCTTCGCATACTCTGACGTAGGATG
CTCGCTCTGGGCTACGCGATTGACCCAGGATTACTGTGGTCGTGCTGCGA
CCTCTAGCCCCGATGCCCCTCCCCGTGTGTCTGCCCAAGCGTCCCAAACT
AGCATTGGCACAGGATTTGTTGCGGCCACCCCTTCCCTTTTCCAGAGTGC
AGGAACGGGCACGAGTGCGAGTGCGACTTCTGGCTTCCAGTCCGTCGCAT
CGGCCGGCGTTGTACCTGCGACTTCTGGCTTCCAGTCCGTCGCACCGGCC
GGCGTTGTACCTTCGGCTGCAGACGTCCAGCCCACAGGATCCGACGGTGT
AGTACCTTAGACTTCGAGCGTCCCCTCTACCTCTTCCGGTGTAGTGCTTC
CGATTTGTGTTTTTCCGTCCGTCGACGTAGACCCAACCCCCACGACGATT
CCCGATTTTCAGCCTGTGATTACGGCTGCCGTAGAATCGTCTTCGATTGT
ATCTCCCCCTGCCGTAGAGCTGACAGACTTTCGCGAGATAGAGATCAACC
CCCTTTTTTCCCAGGATGCATTCCCAATCATGGACATGAGCATGTTTCTG
AATGGCAAATACACGGTCCCCCCGGGTGATTTTTTTCCTGATGCGCTTGA
ATTAGCTGAGTCTGCGGATCCACCCCACCTTGCATTCACTGTGCAGCATG
ATGATTTGGAAGTGTTGAGCGGTTTTCTTTCCGAGTGCAATGAGCAGCAG
GCCGCAGCCCCTCCGTCTCTTTCCCACGCGTTGGCGATTATCGCCCCCGG
TGCTTCCCCATTTTCGGTAGGAAAATCCACGCCCACCATCGACATTAACC
TGTTCCACGCTTCCACCGGCCACGTAAATGAATTTTTGATGCGTGAGACT
GCCAAGCAGCAGGGTGTTCGGCTGGTCGGGGAGCTGCAGCCATGTGTTGG
CTGTGTAGAGGCGAAGGGCAGGAGGGCCCCGGTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGAGGATAATCAGGGAGCGATTCAGATTGCGCACAACC
CGATCACGAACTCCAACTCGAAACACATCGATGTACGACATCACTTTATC
AGGGAGCTGGTAGAGAGGAAGGAGATTTCAATTACTCATGTGCCGACGCA
ATTTCAGCATGCAGATTTCTTGACGAAGGCCATTAGCAAGGAGTCTTTTG
CGTTGCACCGTGACTTTGTGATGAACTTGCAGTGAAGGAAGTGTTTTGGG
GTCGATTCGTATTCTGTGATGGAGAGAGTGAGAGAGACGAGAGATTGGAC
AAGAGAAAAGAGAGAGTCTGGTGAAGGTTGGAGGAGTTGTTGTGTTTAGT
TTTTCTTGATTGTTTTGGAGGAGTTTTGATTGTGTTTGATTTTTCTTGTG
ATGGACTTGGAGGATTTTGGATTGTTTTGGTGAAGATATTGGTTTTTGTT
TGTTTTGGAGAGATGGTAAAGAGGAATTTGGTTTTTCTCGGAGCATGACG
ATGCATACGAGTAGGGGGGCTATTTGATATATTGGGGGTACATGTAGCAT
AGTATAACGGTTGAGATGTTATGTACGTACGTACGAAAGTTACAGTGATG
AGATGCGGAAGAATAGGAAACTTCTACATATATTCCTTGGTTGCGAGAGG
TATTTGGTGAAGGTTCAGAGAGATTCGTTGAGTGACAAAGAGTGAAGGCG
TGACCAGATGCCGTGATGGTTTGACGAGCACTGGCACGGCCCCGATTAAT
ACTATACTTTGCAACACGTTTTCAACACGTTTCTACCCATCCACGCTCCG
CCATGAGCCACCCGCTTTGAGCTCCAACCACAAAGAATCGAGCCACCGGA
ATTATCGATCAGAAGAAATGGTACTCAGCAGAGAACATGAGCACAGAGTT
GTAGCGGAGATGATTTGGCAGGCGAGACTGTAGTTGTTTTATTGTTTCGA
ACCCCGAAATTCCGGTACTGGGGCCATTACTCCGGATACCCTCGGAACCT
GCTGTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGAAAGAAGA
GATGGTACTCAGCAGAGAACATGAGCACAGAGTTGTAGCGGAGATAATTT
GGCAGGCGAGACTGTAGTTGTTTTATTGTTTCGAACCCCGAAATTCCGGT
ACTGGGGCCATTACCCCGGATACCCTCGGAACCTGCTGTGTTGTTGCTGC
TTGTTTTNTTTATTGTTCCGAACCCCGAAATTCCGGTACTCGGGCCATTA
CTCCGGAGACCCTCGGAACCTGCTGTGTTTTTGCTGCTTGTTTCTTGTTT
TTGTTTTGTTGTTGAGATGAGACACAAGCGCGCCTTCGCCCCTTGTGCTC
ACTCTCATCTAGCACCCATCAAAGCCTGACCAGGGAGTCAGTTGATAAGA
GCATCTATCTACATTTCTCTTTCCAAAGCTCGCTCCGGCCTACCGATCTC
ACAGCAGTGTAGACCGACCTCTGTGATATAGCGGTGACAGCAGTGTAACC
TCTGTGGTAGACTACAAAGTCTACGAGCTACAGCAGCACCGCCACCTCCG
CTGCTGCAGGACGCCACATTTTGTGA

protein sequence of EsuBft1015_11a-0001

>EsuBft1015_11 ID=EsuBft1015_11|Name=EsuBft1015_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=199bp
MFDLRPVPTGKEYIQVGNGAYLRVQCVGKVNMAFHMQDQRGERDFCVQTS
DVYVVPGITFNFFSLHHTQRRQRIVLDETGVHLFVGRLSFAYSDVGCSLW
ATRLTQDYCGRAATSSPDAPPRVSAQASQTSIGTGFVAATPSLFQSAGTG
TSASATSGFQSVASAGVVPATSGFQSVAPAGVVPSAADVQPTGSDGVVP

mRNA from alignment at Scaffold_544:244751..249088+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft1015_11a-0001 ID=EsuBft1015_11a-0001|Name=EsuBft1015_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4338bp|location=Sequence derived from alignment at Scaffold_544:244751..249088+ (Ectocarpus subulatus male Bft15b)
GTGGTAATGGATTTGCTTTATCTGCGCAGAACCCGCTTTCCCGTTTTGGT
AGAGAGAAGTTTTGGGCCGACAGCGGTGCGACGAACACTTTTGTGAGCAG
TAGTCATCAAATGTTCGACTTGAGGCCAGTGCCGACAGGCAAAGAGTACA
TTCAGGTTGGCAACGGTGCCTATTTGCGCGTACAATGTGTGGGGAAGGTC
AACATGGCTTTCCACATGCAAGACCAGAGAGGAGAGCGTGATTTTTGCGT
GCAAACGTCGGACGTGTATGTTGTGCCCGGAATCACTTTCAATTTTTTTT
CGTTGCACCACACGCAGCGTAGGCAACGGATCGTCCTTGACGAGACAGGT
GTACATCTCTTTGTTGGTAGACTTTCCTTCGCATACTCTGACGTAGGATG
CTCGCTCTGGGCTACGCGATTGACCCAGGATTACTGTGGTCGTGCTGCGA
CCTCTAGCCCCGATGCCCCTCCCCGTGTGTCTGCCCAAGCGTCCCAAACT
AGCATTGGCACAGGATTTGTTGCGGCCACCCCTTCCCTTTTCCAGAGTGC
AGGAACGGGCACGAGTGCGAGTGCGACTTCTGGCTTCCAGTCCGTCGCAT
CGGCCGGCGTTGTACCTGCGACTTCTGGCTTCCAGTCCGTCGCACCGGCC
GGCGTTGTACCTTCGGCTGCAGACGTCCAGCCCACAGGATCCGACGGTGT
AGTACCTTAGACTTCGAGCGTCCCCTCTACCTCTTCCGGTGTAGTGCTTC
CGATTTGTGTTTTTCCGTCCGTCGACGTAGACCCAACCCCCACGACGATT
CCCGATTTTCAGCCTGTGATTACGGCTGCCGTAGAATCGTCTTCGATTGT
ATCTCCCCCTGCCGTAGAGCTGACAGACTTTCGCGAGATAGAGATCAACC
CCCTTTTTTCCCAGGATGCATTCCCAATCATGGACATGAGCATGTTTCTG
AATGGCAAATACACGGTCCCCCCGGGTGATTTTTTTCCTGATGCGCTTGA
ATTAGCTGAGTCTGCGGATCCACCCCACCTTGCATTCACTGTGCAGCATG
ATGATTTGGAAGTGTTGAGCGGTTTTCTTTCCGAGTGCAATGAGCAGCAG
GCCGCAGCCCCTCCGTCTCTTTCCCACGCGTTGGCGATTATCGCCCCCGG
TGCTTCCCCATTTTCGGTAGGAAAATCCACGCCCACCATCGACATTAACC
TGTTCCACGCTTCCACCGGCCACGTAAATGAATTTTTGATGCGTGAGACT
GCCAAGCAGCAGGGTGTTCGGCTGGTCGGGGAGCTGCAGCCATGTGTTGG
CTGTGTAGAGGCGAAGGGCAGGAGGGCCCCGGTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGAGGATAATCAGGGAGCGATTCAGATTGCGCACAACC
CGATCACGAACTCCAACTCGAAACACATCGATGTACGACATCACTTTATC
AGGGAGCTGGTAGAGAGGAAGGAGATTTCAATTACTCATGTGCCGACGCA
ATTTCAGCATGCAGATTTCTTGACGAAGGCCATTAGCAAGGAGTCTTTTG
CGTTGCACCGTGACTTTGTGATGAACTTGCAGTGAAGGAAGTGTTTTGGG
GTCGATTCGTATTCTGTGATGGAGAGAGTGAGAGAGACGAGAGATTGGAC
AAGAGAAAAGAGAGAGTCTGGTGAAGGTTGGAGGAGTTGTTGTGTTTAGT
TTTTCTTGATTGTTTTGGAGGAGTTTTGATTGTGTTTGATTTTTCTTGTG
ATGGACTTGGAGGATTTTGGATTGTTTTGGTGAAGATATTGGTTTTTGTT
TGTTTTGGAGAGATGGTAAAGAGGAATTTGGTTTTTCTCGGAGCATGACG
ATGCATACGAGTAGGGGGGCTATTTGATATATTGGGGGTACATGTAGCAT
AGTATAACGGTTGAGATGTTATGTACGTACGTACGAAAGTTACAGTGATG
AGATGCGGAAGAATAGGAAACTTCTACATATATTCCTTGGTTGCGAGAGG
TATTTGGTGAAGGTTCAGAGAGATTCGTTGATCTCCCAAGATGGTGCACT
GGAAGGCAGCACTCGGAATTTTAGGGTACGTACGGAGGACGAGTTGGATG
GGGATTACATTTGAGAGGGGAGTGGTGACTGGGATGAGCATGCAGGTGTT
TGTGGATGCCGACTATGCAAGCAAGGCGACAGACCGTAGATCGGTGTCAG
GAGGGCTAGTGATGTGTGGGGGAGGGTGTGTGACTTGGTTTTCGAGGACA
CAGAAATGTGTCACGCTTTCCACCACGGAAGCAGAGTATGTGGCAATTGC
CGATGTCTTGAAGGAAGTGTTGTTCCTGAGGCAGGTGTGGCGTTTTATGT
TGCCAGATGCAGGTATGCCGTGCATCCCGGTGTTCGAGGATGATCAGGGA
GCGATCCAGATTGCGCACAACCCGATCACGAACTCCAACTCGAAACACAT
CGATGTACGACATCACTTTATCAGGGAGTTGGTAGAGAGNCAGTGATGAG
ATGCGGAAGAATAGGAAACTTCTAGACTACATATTATTAATATATTCCTT
GGTTGCGAGAGGTATTTGGTGAAGGTTCAGAGAGATTCGTTGAGTGACAA
AGAGTGAAGGCGTGACCAGATGCCGTGATGGTTTGACGAGCACTGGCACG
GCCCCGATTAATACTATACTTTGCAACACGTTTTCAACACGTTTCTACCC
ATCCACGCTCCGCCATGAGCCACCCGCTTTGAGCTCCAACCACAAAGAAT
CGAGCCACCGGAATTATCGATCAGAAGAAATGGTACTCAGCAGAGAACAT
GAGCACAGAGTTGTAGCGGAGATGATTTGGCAGGCGAGACTGTAGTTGTT
TTATTGTTTCGAACCCCGAAATTCCGGTACTGGGGCCATTACTCCGGATA
CCCTCGGAACCTGCTGTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ACAGAAAGAAGAGATGGTACTCAGCAGAGAACATGAGCACAGAGTTGTAG
CGGAGATAATTTGGCAGGCGAGACTGTAGTTGTTTTATTGTTTCGAACCC
CGAAATTCCGGTACTGGGGCCATTACCCCGGATACCCTCGGAACCTGCTG
TGTTGTTGCTGCTTGTTTTNTTTATTGTTCCGAACCCCGAAATTCCGGTA
CTCGGGCCATTACTCCGGAGACCCTCGGAACCTGCTGTGTTTTTGCTGCT
TGTTTCTTGTTTTTGTTTTGTTGTTGAGATGAGACACAAGCGCGCCTTCG
CCCCTTGTGCTCACTCTCATCTAGCACCCATCAAAGCCTGACCAGGGAGT
CAGTTGATAAGAGCATCTATCTACATTTCTCTTTCCAAAGCTCGCTCCGG
CCTACCGATCTCACAGCAGTGTAGACCGACCTCTGTGATATAGCGGTGAC
AGCAGTGTAACCTCTGTGGTAGACTACAAAGTCTACGAGCTACAGCAGCA
CCGCCACCTCCGCTGCTGCAGGACGCCACATTTTGTGA

Coding sequence (CDS) from alignment at Scaffold_544:244751..249088+

>EsuBft1015_11a-0001 ID=EsuBft1015_11a-0001|Name=EsuBft1015_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=600bp|location=Sequence derived from alignment at Scaffold_544:244751..249088+ (Ectocarpus subulatus male Bft15b)
ATGTTCGACTTGAGGCCAGTGCCGACAGGCAAAGAGTACATTCAGGTTGG
CAACGGTGCCTATTTGCGCGTACAATGTGTGGGGAAGGTCAACATGGCTT
TCCACATGCAAGACCAGAGAGGAGAGCGTGATTTTTGCGTGCAAACGTCG
GACGTGTATGTTGTGCCCGGAATCACTTTCAATTTTTTTTCGTTGCACCA
CACGCAGCGTAGGCAACGGATCGTCCTTGACGAGACAGGTGTACATCTCT
TTGTTGGTAGACTTTCCTTCGCATACTCTGACGTAGGATGCTCGCTCTGG
GCTACGCGATTGACCCAGGATTACTGTGGTCGTGCTGCGACCTCTAGCCC
CGATGCCCCTCCCCGTGTGTCTGCCCAAGCGTCCCAAACTAGCATTGGCA
CAGGATTTGTTGCGGCCACCCCTTCCCTTTTCCAGAGTGCAGGAACGGGC
ACGAGTGCGAGTGCGACTTCTGGCTTCCAGTCCGTCGCATCGGCCGGCGT
TGTACCTGCGACTTCTGGCTTCCAGTCCGTCGCACCGGCCGGCGTTGTAC
CTTCGGCTGCAGACGTCCAGCCCACAGGATCCGACGGTGTAGTACCTTAG