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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 160860.XP_007357160.1 |
ProteomeId | EsuBft1010_3 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 4 |
Max annot lvl | 4751|Fungi |
Length | 267 |
Hectar predicted targeting category | other localisation |
Evalue | 1.07e-36 |
EggNOG OGs | 29JY0@1|root,2RT6R@2759|Eukaryota,39VBJ@33154|Opisthokonta,3P12S@4751|Fungi,3V3WY@5204|Basidiomycota,22F53@155619|Agaricomycetes,3H41B@355688|Agaricomycetes incertae sedis |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1010_3a-0001 ID=EsuBft1010_3a-0001|Name=EsuBft1010_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2675bp|location=Sequence derived from alignment at Scaffold_54:1590..4891+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGACAGAGACCACGAAAGATATGGACTTCGATGATGAGGACTCACAGGAG TACAGAGACGTGCAGAGCACCCTTCCGGACGGATACACCATTCGCAAGGT CGCCATCGACAGGAAAACCGCGCGCAAGTACCGTCTCACAATAGCCGTTA CCTCTGCTGGTGATGCGGACCGGCTGAAGTGGCGCAGCCGATGGATCACA AAGGGGAAACCGCGTGCGCGGCTGGCTTCTGCCGAGCGTGAGTGCATCGA TGAGCTGTCGCTCTTGACATGGTTGGACCTTCAGGCAATGAGCGCTACTG CTGAGGGTGTGCCAAGCGCACCTACGCGCGACGGCATGCTGCGAGATGCA GCCCCAGAACCTGGTTCTCTCAAAGAACCTGGCGTTGGAGGCACACGGAA GAGGCCGCGCAACGCATGTTGGGGTGGCACCAGAGAGGGCGCTGGACGAA TGAAGGGGAGCGTCGGCAAGAGGGCCACACGGGAGCGAGCTATTGCCTTG CGGCAGCAACTCACGCAGGCCATCCCCGACGCTTTTGAACTCTCCTGTTG GCAGCTGGAGGAAGCCTTGGCAGTGTGGAAGGAGATCGAGCCTGAGCTTG TCGACAAGGCCAGGAAGAAATTCCTGAACAAGGGGTACAGCCAATCGCAG GCGCTGAAAAAGATGAAGCGCGCTCGAGATGCGGAAGCGAGGGTGGTGAT GAGGGATGTGGTGGCCCACGATTTTCGTGAAGAGCAGCTGAAGTACTTTG CGAAGGTCAGGAGGGACGCTGCGGTGGTCATCAGCGCATCAGCAGTCGAG GAGGAGGATGATGTCCCTTCTGCAGCCAAGAGCCTGTCCAACTACCAGCG AGGAGAGATTGTTGTGCATGCACTCACCTTGGCGGAACTGTACAGACAAC AGAACGACGGCGTCGATCGCGAGACCGCTCTACAGATGGCGGCAGAGACG GGATTTTGTACCCCCGACACCGTGCGCGAGTGGGAAAGAAGTTTCCTCGC GCGCGGTCACATCAAGGTCTCTGCAGCGGGGCGCTTTCAGCGGAACTTTC TCTTGGGGCTCGACAACAGCATACTCACCGAGTGCAAGGACTGGACGCGC GCTTGGGGTGGGATACTCAAGGGACAGGCGAACAAAACAGCCGAGGACTT CCGCCAGTTCGTCAACACCGACATCATGCCCAAGATTGAGGCGCTGATGA CGCCTGACTACGACCCTTTCAAGGGGCTGCGAGTCAACCTGGTGGAAGTA AAAAAGGGTGAGCCCAAGAAGCGACACATTTCGATTTGGACTGCAACAGC GTGGCTAAAAAAGCTTGGGTGCGAGTACCACCAAGGCAAGGGTGGCTTGT ACTTCGATGGGCACGATGACGAGAAGGTCTTGGAGTACCGAAACGACACG TACCTTCCGGAGCTTTTCAAGACCCGCGACTACATGGAGGTTTGGATTCC GATGGAGGAACGAGTGACGAGCAAGCTACGGTACGAGGACGGCAAGATGG CGCTTCTCTGCTACCAGGACGAGAGCATCTTCAGAGCCAACGACGACCAA AAAGCCGCGTGGTGGGCGCCAGACGTGCACGTGGTGAGGAAGAAATCGCC CGGGCAGGGTATCATGGTGTCGGGAACCATCATTCACAACGTTGGATTCG TCTCGGCCACGAAGCGGGAGATCAAGTCCGCCGAGCAGCTCCGCAGGAAG CGTTGCAACGCCTCGGCTGCTGCAGCTAAGCGAGGGGAGAACGTGAAAGT CGAGGTTTACCGGCGGATCGACAAGCTGTACGTCGACGAGGAAGGCAACT ACTGGTCTTACCACCTCTTTGAGTATGGCAAGAACAAGGAGGGGTACTGG ACTGGCCTCAAGATGCTCGACCACATGTCGGACGTCATCGACATGCTTGC GATCAAGTACCCCAACCACAAACCAGTGGGGCTGTTCGACTGGTCGTCCT GCCACGACTGCTTGGAGGAAGGCGCACCAACGGTGAAAAGGATGAACGTG GGACACGGTGGGAAGAGGCAGGGAGAAGAGATCGCCGGGATGGATGCCGT TACCCTGAGGGAAGACACCCCTAACCTCGGAAAGGGCTCCATCCAGCACT TGGTTTTTCAACCAGGAGACGACCCCCCGATGTACGCTCCGCATCTAGCG CCGGCGGAGTACGTAGGGAAGCTGAAAGGCATGCGGCAGATCTTGTGGGA GAGGGGGCTCCTGAAGGACGGCATGAGCAAGTCGGGGGGCAGCGGCACGA AGCAGGACCTCAGCATGAGCATGGAGCACGTCCTGGGCGAGCAGAAGGAC TTTAAGGAAGTGGAGTCCAGCCTAGCGCTCCTGATGGCGCGCCACGGGGG GTTCTGTATCATGCTCCCCAAGTACCACTGCGAGTGCAACCCCATAGAGC TAGTTTGGGGCCGCGCCAAGGACTGGACACGCAAGCATTGCAACTACTCA TTAGATGCACTGCGGGAAAACGTGCCGTTGAGCTTTAGAGTAGAGCCTGA TAGGCAAGCCGTGGGAACGGTGCAGGCGTACTGCAAGAAGTCGTACACAC ATAATTTGGTGTACCGTGATACGCGTGCTGTAGGGCCTGAGGGAGAGAAA CACTACCAAACGTACAAATCGCACAGGCGCCCAGCACCATCTGAGTACAA GCTCAAGGCTGCGAATGCCCCCTAA back to topprotein sequence of EsuBft1010_3a-0001 >EsuBft1010_3 ID=EsuBft1010_3|Name=EsuBft1010_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=884bp
MDFDDEDSQEYRDVQSTLPDGYTIRKVAIDRKTARKYRLTIAVTSAGDAD RLKWRSRWITKGKPRARLASAERECIDELSLLTWLDLQAMSATAEGVPSA PTRDGMLRDAAPEPGSLKEPGVGGTRKRPRNACWGGTREGAGRMKGSVGK RATRERAIALRQQLTQAIPDAFELSCWQLEEALAVWKEIEPELVDKARKK FLNKGYSQSQALKKMKRARDAEARVVMRDVVAHDFREEQLKYFAKVRRDA AVVISASAVEEEDDVPSAAKSLSNYQRGEIVVHALTLAELYRQQNDGVDR ETALQMAAETGFCTPDTVREWERSFLARGHIKVSAAGRFQRNFLLGLDNS ILTECKDWTRAWGGILKGQANKTAEDFRQFVNTDIMPKIEALMTPDYDPF KGLRVNLVEVKKGEPKKRHISIWTATAWLKKLGCEYHQGKGGLYFDGHDD EKVLEYRNDTYLPELFKTRDYMEVWIPMEERVTSKLRYEDGKMALLCYQD ESIFRANDDQKAAWWAPDVHVVRKKSPGQGIMVSGTIIHNVGFVSATKRE IKSAEQLRRKRCNASAAAAKRGENVKVEVYRRIDKLYVDEEGNYWSYHLF EYGKNKEGYWTGLKMLDHMSDVIDMLAIKYPNHKPVGLFDWSSCHDCLEE GAPTVKRMNVGHGGKRQGEEIAGMDAVTLREDTPNLGKGSIQHLVFQPGD DPPMYAPHLAPAEYVGKLKGMRQILWERGLLKDGMSKSGGSGTKQDLSMS MEHVLGEQKDFKEVESSLALLMARHGGFCIMLPKYHCECNPIELVWGRAK DWTRKHCNYSLDALRENVPLSFRVEPDRQAVGTVQAYCKKSYTHNLVYRD TRAVGPEGEKHYQTYKSHRRPAPSEYKLKAANAP back to topmRNA from alignment at Scaffold_54:1590..4891+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1010_3a-0001 ID=EsuBft1010_3a-0001|Name=EsuBft1010_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3302bp|location=Sequence derived from alignment at Scaffold_54:1590..4891+ (Ectocarpus subulatus male Bft15b) GGACAGAGACCACGAAAGATATGGACTTCGATGATGAGGACTCACAGGAG
TACAGAGACGTGCAGAGCACCCTTCCGGACGGATACACCATTCGCAAGGT
CGCCATCGACAGGAAAACCGCGCGCAAGTACCGTCTCACAATAGCCGTTA
CCTCTGCTGGTGATGCGGACCGGCTGAAGTGGCGCAGCCGATGGATCACA
AAGGGGAAACCGCGTGCGCGGCTGGCTTCTGCCGAGCGTGAGTGCATCGA
TGAGCTGTCGCTCTTGACATGGTTGGACCTTCAGGCAATGAGCGCTACTG
CTGAGGGTGTGCCAAGCGCACCTACGCGCGACGGCATGCTGCGAGATGCA
GCCCCAGAACCTGGTTCTCTCAAAGAACCTGGCGTTGGAGGCACACGGAA
GAGGCCGCGCAACGCATGTTGGGGTGGCACCAGAGAGGGCGCTGGACGAA
TGAAGGGGAGCGTCGGCAAGAGGGCCACACGGGAGCGAGCTATTGCCTTG
CGGCAGCAACTCACGCAGGCCATCCCCGACGCTTTTGAACTCTCCTGTTG
GCAGCTGGAGGAAGCCTTGGCAGTGTGGAAGGAGATCGAGCCTGAGCTTG
TCGACAAGGCCAGGAAGAAATTCCTGAACAAGGGGTACAGCCAATCGCAG
GCGCTGAAAAAGATGAAGCGCGCTCGAGATGCGGAAGCGAGGGTGGTGAT
GAGGGATGTGGTGGCCCACGATTTTCGTGAAGAGCAGCTGAAGTACTTTG
CGAAGGTCAGGAGGGACGCTGCGGTGGTCATCAGCGCATCAGCAGTCGAG
GAGGAGGATGATGTGAGTTTTCATAAATGCAATTAAACTGCACAAAGTAC
TGCTGTACTGTACTGCTGAAGTACGGTTTGTAAACTTATGGGCATTACTG
CTGTGTGTTACTACACCGGTTGTTGCATGGTCAGCTGCTTTGTACACAGC
AGTGCATTCTCTCCCATGACTGTTGGCAGCGCGTGCCTCTGCCTGTGCTG
TGAAATCTTTTGCTGGGGCTAATTGCACTCGTCAAACTCCATTCTGCTTT
TATTTCACCGAACCAGGTCCCTTCTGCAGCCAAGAGCCTGTCCAACTACC
AGCGAGGAGAGATTGTTGTGCATGCACTCACCTTGGCGGAACTGTACAGA
CAACAGAACGACGGCGTCGATCGCGAGACCGCTCTACAGATGGCGGCAGA
GACGGGATTTTGTACCCCCGACACCGTGCGCGAGTGGGAAAGAAGTTTCC
TCGCGCGCGGTCACATCAAGGTCTCTGCAGCGGGGCGCTTTCAGCGGAAC
TTTCTCTTGGGGCTCGACAACAGCATACTCACCGAGTGCAAGGACTGGAC
GCGCGCTTGGGGTGGGATACTCAAGGGACAGGCGAACAAAACAGCCGAGG
ACTTCCGCCAGTTCGTCAACACCGACATCATGCCCAAGATTGAGGCGCTG
ATGACGCCTGACTACGACCCTTTCAAGGGGCTGCGAGTCAACCTGGTGGA
AGTAAAAAAGGGTGAGCCCAAGAAGCGACACATTTCGATTTGGACTGCAA
CAGCGTGGCTAAAAAAGCTTGGGTGCGAGTACCACCAAGGCAAGGGTGGC
TTGTACTTCGATGGGCACGATGACGAGAAGGTCTTGGAGTACCGAAACGA
CACGTACCTTCCGGAGCTTTTCAAGACCCGCGACTACATGGAGGTTTGGA
TTCCGATGGAGGTAGCTGAAGCGGAGACATGGGGTGTATCGACACGTCAC
GCGTGGGCGATTTCGACAGAACAGACGACGGCGGAGTGTGGGTCGGTGTT
GACGATCTGGAGCCAGTCTTGACGGACTTACCGAAATCGCTGCAGGAACG
AGTGACGAGCAAGCTACGGTACGAGGACGGCAAGATGGCGCTTCTCTGCT
ACCAGGACGAGAGCATCTTCAGAGGTAAATTCTACATTAGAAAATTGAAG
CTGGAGAAGAATGTATTCATATTGTCAGTAAAAATCATGTTGAATGTTTT
CGAATTCTGTCTTTTTTCGTGCTTCAAAAGTTACCTACGTCGCATGTGAG
TTATGGCTGGTTCGGAAATGAAGTTAATATTTTTTACAATGCCACCGTTA
AGTGTACCCCTTCTTGTCCCTTCGTTTCCCTCTACCCCGTATCTGTTCCC
TCTTTGACCGCAGCCAACGACGACCAAAAAGCCGCGTGGTGGGCGCCAGA
CGTGCACGTGGTGAGGAAGAAATCGCCCGGGCAGGGTATCATGGTGTCGG
GAACCATCATTCACAACGTTGGATTCGTCTCGGCCACGAAGCGGGAGATC
AAGTCCGCCGAGCAGCTCCGCAGGAAGCGTTGCAACGCCTCGGCTGCTGC
AGCTAAGCGAGGGGAGAACGTGAAAGTCGAGGTTTACCGGCGGATCGACA
AGCTGTACGTCGACGAGGAAGGCAACTACTGGTCTTACCACCTCTTTGAG
TATGGCAAGAACAAGGAGGGGTACTGGACTGGCCTCAAGATGCTCGACCA
CATGTCGGACGTCATCGACATGCTTGCGATCAAGTACCCCAACCACAAAC
CAGTGGGGCTGTTCGACTGGTCGTCCTGCCACGACTGCTTGGAGGAAGGC
GCACCAACGGTGAAAAGGATGAACGTGGGACACGGTGGGAAGAGGCAGGG
AGAAGAGATCGCCGGGATGGATGCCGTTACCCTGAGGGAAGACACCCCTA
ACCTCGGAAAGGGCTCCATCCAGCACTTGGTTTTTCAACCAGGAGACGAC
CCCCCGATGTACGCTCCGCATCTAGCGCCGGCGGAGTACGTAGGGAAGCT
GAAAGGCATGCGGCAGATCTTGTGGGAGAGGGGGCTCCTGAAGGACGGCA
TGAGCAAGTCGGGGGGCAGCGGCACGAAGCAGGACCTCAGCATGAGCATG
GAGCACGTCCTGGGCGAGCAGAAGGACTTTAAGGAAGTGGAGTCCAGCCT
AGCGCTCCTGATGGCGCGCCACGGGGGGTTCTGTATCATGCTCCCCAAGT
ACCACTGCGAGTGCAACCCCATAGAGCTAGTTTGGGGCCGCGCCAAGGAC
TGGACACGCAAGCATTGCAACTACTCATTAGATGCACTGCGGGAAAACGT
GCCGTTGAGCTTTAGAGTAGAGCCTGATAGGCAAGCCGTGGGAACGGTGC
AGGCGTACTGCAAGAAGTCGTACACACATAATTTGGTGTACCGTGATACG
CGTGCTGTAGGGCCTGAGGGAGAGAAACACTACCAAACGTACAAATCGCA
CAGGCGCCCAGCACCATCTGAGTACAAGCTCAAGGCTGCGAATGCCCCCT
AA back to topCoding sequence (CDS) from alignment at Scaffold_54:1590..4891+ >EsuBft1010_3a-0001 ID=EsuBft1010_3a-0001|Name=EsuBft1010_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2655bp|location=Sequence derived from alignment at Scaffold_54:1590..4891+ (Ectocarpus subulatus male Bft15b) ATGGACTTCGATGATGAGGACTCACAGGAGTACAGAGACGTGCAGAGCAC CCTTCCGGACGGATACACCATTCGCAAGGTCGCCATCGACAGGAAAACCG CGCGCAAGTACCGTCTCACAATAGCCGTTACCTCTGCTGGTGATGCGGAC CGGCTGAAGTGGCGCAGCCGATGGATCACAAAGGGGAAACCGCGTGCGCG GCTGGCTTCTGCCGAGCGTGAGTGCATCGATGAGCTGTCGCTCTTGACAT GGTTGGACCTTCAGGCAATGAGCGCTACTGCTGAGGGTGTGCCAAGCGCA CCTACGCGCGACGGCATGCTGCGAGATGCAGCCCCAGAACCTGGTTCTCT CAAAGAACCTGGCGTTGGAGGCACACGGAAGAGGCCGCGCAACGCATGTT GGGGTGGCACCAGAGAGGGCGCTGGACGAATGAAGGGGAGCGTCGGCAAG AGGGCCACACGGGAGCGAGCTATTGCCTTGCGGCAGCAACTCACGCAGGC CATCCCCGACGCTTTTGAACTCTCCTGTTGGCAGCTGGAGGAAGCCTTGG CAGTGTGGAAGGAGATCGAGCCTGAGCTTGTCGACAAGGCCAGGAAGAAA TTCCTGAACAAGGGGTACAGCCAATCGCAGGCGCTGAAAAAGATGAAGCG CGCTCGAGATGCGGAAGCGAGGGTGGTGATGAGGGATGTGGTGGCCCACG ATTTTCGTGAAGAGCAGCTGAAGTACTTTGCGAAGGTCAGGAGGGACGCT GCGGTGGTCATCAGCGCATCAGCAGTCGAGGAGGAGGATGATGTCCCTTC TGCAGCCAAGAGCCTGTCCAACTACCAGCGAGGAGAGATTGTTGTGCATG CACTCACCTTGGCGGAACTGTACAGACAACAGAACGACGGCGTCGATCGC GAGACCGCTCTACAGATGGCGGCAGAGACGGGATTTTGTACCCCCGACAC CGTGCGCGAGTGGGAAAGAAGTTTCCTCGCGCGCGGTCACATCAAGGTCT CTGCAGCGGGGCGCTTTCAGCGGAACTTTCTCTTGGGGCTCGACAACAGC ATACTCACCGAGTGCAAGGACTGGACGCGCGCTTGGGGTGGGATACTCAA GGGACAGGCGAACAAAACAGCCGAGGACTTCCGCCAGTTCGTCAACACCG ACATCATGCCCAAGATTGAGGCGCTGATGACGCCTGACTACGACCCTTTC AAGGGGCTGCGAGTCAACCTGGTGGAAGTAAAAAAGGGTGAGCCCAAGAA GCGACACATTTCGATTTGGACTGCAACAGCGTGGCTAAAAAAGCTTGGGT GCGAGTACCACCAAGGCAAGGGTGGCTTGTACTTCGATGGGCACGATGAC GAGAAGGTCTTGGAGTACCGAAACGACACGTACCTTCCGGAGCTTTTCAA GACCCGCGACTACATGGAGGTTTGGATTCCGATGGAGGAACGAGTGACGA GCAAGCTACGGTACGAGGACGGCAAGATGGCGCTTCTCTGCTACCAGGAC GAGAGCATCTTCAGAGCCAACGACGACCAAAAAGCCGCGTGGTGGGCGCC AGACGTGCACGTGGTGAGGAAGAAATCGCCCGGGCAGGGTATCATGGTGT CGGGAACCATCATTCACAACGTTGGATTCGTCTCGGCCACGAAGCGGGAG ATCAAGTCCGCCGAGCAGCTCCGCAGGAAGCGTTGCAACGCCTCGGCTGC TGCAGCTAAGCGAGGGGAGAACGTGAAAGTCGAGGTTTACCGGCGGATCG ACAAGCTGTACGTCGACGAGGAAGGCAACTACTGGTCTTACCACCTCTTT GAGTATGGCAAGAACAAGGAGGGGTACTGGACTGGCCTCAAGATGCTCGA CCACATGTCGGACGTCATCGACATGCTTGCGATCAAGTACCCCAACCACA AACCAGTGGGGCTGTTCGACTGGTCGTCCTGCCACGACTGCTTGGAGGAA GGCGCACCAACGGTGAAAAGGATGAACGTGGGACACGGTGGGAAGAGGCA GGGAGAAGAGATCGCCGGGATGGATGCCGTTACCCTGAGGGAAGACACCC CTAACCTCGGAAAGGGCTCCATCCAGCACTTGGTTTTTCAACCAGGAGAC GACCCCCCGATGTACGCTCCGCATCTAGCGCCGGCGGAGTACGTAGGGAA GCTGAAAGGCATGCGGCAGATCTTGTGGGAGAGGGGGCTCCTGAAGGACG GCATGAGCAAGTCGGGGGGCAGCGGCACGAAGCAGGACCTCAGCATGAGC ATGGAGCACGTCCTGGGCGAGCAGAAGGACTTTAAGGAAGTGGAGTCCAG CCTAGCGCTCCTGATGGCGCGCCACGGGGGGTTCTGTATCATGCTCCCCA AGTACCACTGCGAGTGCAACCCCATAGAGCTAGTTTGGGGCCGCGCCAAG GACTGGACACGCAAGCATTGCAACTACTCATTAGATGCACTGCGGGAAAA CGTGCCGTTGAGCTTTAGAGTAGAGCCTGATAGGCAAGCCGTGGGAACGG TGCAGGCGTACTGCAAGAAGTCGTACACACATAATTTGGTGTACCGTGAT ACGCGTGCTGTAGGGCCTGAGGGAGAGAAACACTACCAAACGTACAAATC GCACAGGCGCCCAGCACCATCTGAGTACAAGCTCAAGGCTGCGAATGCCC CCTAA back to top
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