EsuBft100_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_441:97503..99172-
coding sequence from alignment at Scaffold_441:97503..99172-

spliced messenger RNA

>EsuBft100_2a-0001 ID=EsuBft100_2a-0001|Name=EsuBft100_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1670bp|location=Sequence derived from alignment at Scaffold_441:97503..99172- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CGCCGCGCTGATGTGCTCGAGATGGTGCGGAAGGATCCCGTGTTGGAGGA
GGAGATGAGGACAATGCTGGGGGTGCAAGGGTTGGAGGGCGTAGCCGCAG
CTCACGCGGAAAACACTCGCGCGATGGCCGCTTCGTTGGCCGCGTTGAAG
GGCAAAAGCCAGAGTAACATCGGCCGCGTTGCGTATACGACCGTGCTGGC
CGCGGTGGCTGGAGCTGGGGAGCACACTTGCAGCCCTACCGATCCGTGCA
ACCCCGCAGAGCGGTGCCCTCCCGCTGAGCCGCAGGGTGGCGTGAGCTTC
GCCCAGCGAGCGGAGAGCCTTGGGGTGAGGGAGAAAACGTTCCGCGCGGC
GTATGTCCGGATGCACCATACCGACCATACTATCCCCCCGCCGCAAGCTC
TGGAAGAGGGGCGCTACTGCTGGACTACACGCAAGACAAGGAGCGACGCG
ACGGACGAACGTGTGCTGGAGTTAGCGATCCGGTTCTGGCATTGCGACGA
CGTCTCGCGTGCATCGGGAGATTCACCAGTTCATGGGGGCGGAGAACCAG
GACCAAAGGCTTAGAAGTAGCCTAGGGGTGGAACCAGCAGATAGTAGAGT
CGTGGTAGCGGCAGGGGATGAACACGCGAACCCTGGCCCCGAAGTAGTCG
GACCAGCCCCGCGCCCCGAAAGGGTTACGAGAAATACACGTGCAGTGTTC
GCAGGGAGTCGGTAGCATTTTGAGTGCCTCACTTGGTCGTTTTAATGTAT
TTTGATCTCGTTCGTGGTCATTGCTGGTGGTGGTGGTGGTGGTGGTGGTG
CTGCTGCTGTTTTGTGTTGTGTTGCTGTGTATAGCATGCTGTGAGTTGTT
GTGTGCCGCCAGTGCTGTTTCGTTGTCGTTGAGGAAACTAACGGAGAAAC
CAGATTGTACTCTTTGGGTGTTTTCACCGTCAAAAACAACCACACTTCAA
CAAATTCAATTAGATTAGTACTTTAAACAAATTTAGTATGAGTATCGTAG
CAATTTTGTCATGCATAACAACGTGCATGTCCCACGCACATCATTCACGG
CCGTCAGCGCGCCATGTTGCCCGCGTAGAAGCGCATAATAACGAGAGAAA
ACGGATGAAAACACCGGGGGGGGACAAAACCGTCCCATCCCCGGGTTTGC
ATTATTCCATTCATTAAGTCATATAAACTGAGAAAGTCGTTGAAACCCCC
ACTTCCCTACCTCCGTCACCAAATCTGACCACGGGAATCGTGCACACATG
GGTAGAGGTGACTACAACCAACTTTTCAGAGCTTAGCGGGTTCGGTATTC
GCTCAATCTCAACTTCGGGCACACGATCTCGGAAGGCGCCATAGGAGGGG
GGGGCTGGACCACCCCATGTACCCACTTATGTCTATATTTTGTCCCACTT
TTGTCCAAATTGTACCCACATTTGTCCATTACGGACGGCGGAAATCGAGC
TGAAATTGACCTCCACGTCACCGCACGGCAGAACATCGAATGGCCTCGGA
GCGTCTCAGAACCTCCCAACATCGTATCCATGGCATCTTTCGTATCCATG
GCTGCCGACTGCGGACCGACCGCGGAGGAACATGTCAGACACATGCCAGG
CGCCTTCGGTACCGGCACGGGAGAATACCAGGCACGGGAAGATGCCCGCG
GCAAGCCCGGCAAGCAGCGC

protein sequence of EsuBft100_2a-0001

>EsuBft100_2 ID=EsuBft100_2|Name=EsuBft100_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=180bp
MVRKDPVLEEEMRTMLGVQGLEGVAAAHAENTRAMAASLAALKGKSQSNI
GRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAEPQGGVSFAQRAESL
GVREKTFRAAYVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDERVLE
LAIRFWHCDDVSRASGDSPVHGGGEPGPKA

mRNA from alignment at Scaffold_441:97503..99172-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft100_2a-0001 ID=EsuBft100_2a-0001|Name=EsuBft100_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1670bp|location=Sequence derived from alignment at Scaffold_441:97503..99172- (Ectocarpus subulatus male Bft15b)
CGCCGCGCTGATGTGCTCGAGATGGTGCGGAAGGATCCCGTGTTGGAGGA
GGAGATGAGGACAATGCTGGGGGTGCAAGGGTTGGAGGGCGTAGCCGCAG
CTCACGCGGAAAACACTCGCGCGATGGCCGCTTCGTTGGCCGCGTTGAAG
GGCAAAAGCCAGAGTAACATCGGCCGCGTTGCGTATACGACCGTGCTGGC
CGCGGTGGCTGGAGCTGGGGAGCACACTTGCAGCCCTACCGATCCGTGCA
ACCCCGCAGAGCGGTGCCCTCCCGCTGAGCCGCAGGGTGGCGTGAGCTTC
GCCCAGCGAGCGGAGAGCCTTGGGGTGAGGGAGAAAACGTTCCGCGCGGC
GTATGTCCGGATGCACCATACCGACCATACTATCCCCCCGCCGCAAGCTC
TGGAAGAGGGGCGCTACTGCTGGACTACACGCAAGACAAGGAGCGACGCG
ACGGACGAACGTGTGCTGGAGTTAGCGATCCGGTTCTGGCATTGCGACGA
CGTCTCGCGTGCATCGGGAGATTCACCAGTTCATGGGGGCGGAGAACCAG
GACCAAAGGCTTAGAAGTAGCCTAGGGGTGGAACCAGCAGATAGTAGAGT
CGTGGTAGCGGCAGGGGATGAACACGCGAACCCTGGCCCCGAAGTAGTCG
GACCAGCCCCGCGCCCCGAAAGGGTTACGAGAAATACACGTGCAGTGTTC
GCAGGGAGTCGGTAGCATTTTGAGTGCCTCACTTGGTCGTTTTAATGTAT
TTTGATCTCGTTCGTGGTCATTGCTGGTGGTGGTGGTGGTGGTGGTGGTG
CTGCTGCTGTTTTGTGTTGTGTTGCTGTGTATAGCATGCTGTGAGTTGTT
GTGTGCCGCCAGTGCTGTTTCGTTGTCGTTGAGGAAACTAACGGAGAAAC
CAGATTGTACTCTTTGGGTGTTTTCACCGTCAAAAACAACCACACTTCAA
CAAATTCAATTAGATTAGTACTTTAAACAAATTTAGTATGAGTATCGTAG
CAATTTTGTCATGCATAACAACGTGCATGTCCCACGCACATCATTCACGG
CCGTCAGCGCGCCATGTTGCCCGCGTAGAAGCGCATAATAACGAGAGAAA
ACGGATGAAAACACCGGGGGGGGACAAAACCGTCCCATCCCCGGGTTTGC
ATTATTCCATTCATTAAGTCATATAAACTGAGAAAGTCGTTGAAACCCCC
ACTTCCCTACCTCCGTCACCAAATCTGACCACGGGAATCGTGCACACATG
GGTAGAGGTGACTACAACCAACTTTTCAGAGCTTAGCGGGTTCGGTATTC
GCTCAATCTCAACTTCGGGCACACGATCTCGGAAGGCGCCATAGGAGGGG
GGGGCTGGACCACCCCATGTACCCACTTATGTCTATATTTTGTCCCACTT
TTGTCCAAATTGTACCCACATTTGTCCATTACGGACGGCGGAAATCGAGC
TGAAATTGACCTCCACGTCACCGCACGGCAGAACATCGAATGGCCTCGGA
GCGTCTCAGAACCTCCCAACATCGTATCCATGGCATCTTTCGTATCCATG
GCTGCCGACTGCGGACCGACCGCGGAGGAACATGTCAGACACATGCCAGG
CGCCTTCGGTACCGGCACGGGAGAATACCAGGCACGGGAAGATGCCCGCG
GCAAGCCCGGCAAGCAGCGC

Coding sequence (CDS) from alignment at Scaffold_441:97503..99172-

>EsuBft100_2a-0001 ID=EsuBft100_2a-0001|Name=EsuBft100_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=543bp|location=Sequence derived from alignment at Scaffold_441:97503..99172- (Ectocarpus subulatus male Bft15b)
ATGGTGCGGAAGGATCCCGTGTTGGAGGAGGAGATGAGGACAATGCTGGG
GGTGCAAGGGTTGGAGGGCGTAGCCGCAGCTCACGCGGAAAACACTCGCG
CGATGGCCGCTTCGTTGGCCGCGTTGAAGGGCAAAAGCCAGAGTAACATC
GGCCGCGTTGCGTATACGACCGTGCTGGCCGCGGTGGCTGGAGCTGGGGA
GCACACTTGCAGCCCTACCGATCCGTGCAACCCCGCAGAGCGGTGCCCTC
CCGCTGAGCCGCAGGGTGGCGTGAGCTTCGCCCAGCGAGCGGAGAGCCTT
GGGGTGAGGGAGAAAACGTTCCGCGCGGCGTATGTCCGGATGCACCATAC
CGACCATACTATCCCCCCGCCGCAAGCTCTGGAAGAGGGGCGCTACTGCT
GGACTACACGCAAGACAAGGAGCGACGCGACGGACGAACGTGTGCTGGAG
TTAGCGATCCGGTTCTGGCATTGCGACGACGTCTCGCGTGCATCGGGAGA
TTCACCAGTTCATGGGGGCGGAGAACCAGGACCAAAGGCTTAG