EsuBft100_17a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Cross References

External references for this mRNA


Database	Accession
GO	0071944
GO	0043231
GO	0000280
GO	0051258
GO	0005874
GO	0050794
GO	0008017
GO	0000910
GO	0003824
GO	0000226
GO	0016020
GO	0005819
GO	1903047
GO	0044710
GO	0044238

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_441:269191..274220-
coding sequence from alignment at Scaffold_441:269191..274220-

spliced messenger RNA

>EsuBft100_17a-0001 ID=EsuBft100_17a-0001|Name=EsuBft100_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1815bp|location=Sequence derived from alignment at Scaffold_441:269191..274220- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTAGCGGCACCCAGACCAGCACCACGGCCAACACTGGGTACCCGCGCCGT
ACACCAGAGAAAAGGCTTTCTTTCACGCCTGTGGATTGTCTCGTTTGATT
GGCACTCTAGTCAGCTTTGCTCGGAGCGTACCATCAAGTGATTGCTCGAC
TCGTGCTGGAGAGCGAGAGGAACCTTGTAACGCAATGTCTGCGTATGTTG
ACGATGCGCCTGCTGCTGATGGGCGTATCGTGGAGCTTGCGAAGCAGACC
ACTTCTCGGCTCGAGGTGCTCTGGGATGAGGTTGGGTATACCTCCGAAGA
GAAGCGTCGTCAGATGCAGGGTCTTGTCGATGGATTTCAGACTCTGTGCG
AGAACAAGGAAAAGCAAGAGGAGGGTGTGAAAAGCCAGTTCGTGACTTCT
ATCGCGGACGCAAAGGATCGAATCAAGACCGCCAGAAAGAAACTCGGACA
GGAGCATACAGAGGACTCCTCCACAGACGACATGAGCCTCACGGACCAGC
TTGCCTATTACGAGATGGAAGCAGATGCAATCAAGAAGATGTGCAAGGCA
CAGCAGGAGAAGTTCGAGAAGTTGTCCGAAGAGTTGGTGCACATGAGCAT
GGTGCTGGGAGATGACTCTGATGCCGACCTGGCTGAGTGGAGGGACCTCG
AGTCTTCCTTAACCAACGAGAGGCTCCAGGCCTTCAAAGACAAGAAGACA
GAGCTCAACAAGGCCACGGAGGACCGCATGCAGACGGTAGCATCACTGGT
GAGCACGGTGCAGGACCTGATGGAAGAGCTCAAGATCCCTGCAGTGACAG
CCCTGGACAACCGCATCTTGGGCTCGCTGGCAATCCCATCCTCTGCCGGA
GTACCAGTTCTTCAAACAACCGAGCGAACGCCATCGTCTGTGGGCATCGA
CAGAGCCGCGCTGGACGAGTTGACTGCGAAACACGAAGAGCTCATCATGC
AGAGGAACACTCGTCGGGAGAAGCTGGAGAAAATGGGCGAGGAGATACTG
GACCTTTGGCAGCAGCTGGACATCGGCAAGGATGAGCAGGATGTGTTCGC
TAAGAGCGTGGACGGGATGGGGCTACAGACGCTGGAGGCTGGAGAAACGG
AACTCAACCGCCTCCGGAAGCTTAAGCTCGAAAAGATGGGAGAACTCGTG
CTGGCGTCCAGGGCAAAGATCCGAGAACTCTGGGATGAGATCGGATACTC
CGAAACCGAGCGGCTTGCGTTTAAGCCAATGCTGGTCACCGAAGAGGGTT
TCACGGACGAGCTCCTGCAACAGCACACACAGGAAGCGGACAAGCTGGCC
ATGAAGTTCGAGACCATGAAACACATCCTGGAGAAAATTGAAGAGCGCGA
AACCCTTGTCGAGCAGCGAATCGAGTACGAGACCAGCACGAAAGACCCGG
ATCGCCTCAGGCCTAAGGGCAGCCAACAAGAGCGCAGAGAGCGACGCCGA
AGGCTCCAGGAGGAACTCGAGGCGGAGAAGCGCATCAAGAACCGTCTCCC
AATGCTCACGAGCAGCCTGTCTAAGACCATCCCCCAGTGGGAGAACGCAC
AAGACTCGGTGTTCCTGTACAAGGGCGAAAGGTACTTGGATACCCTGCAG
CGGTCGGAAGATGAGTACCTAGCTCTCAAGGACCAGATCAAGGCTGCCAA
GGCTGCCACCAAGAAGGTAAAACGCAAAAACATACCCCTGTCCTATATGT
CGACCGGCCGCGGTTGAATCGCGCTTGGATTGCTGCACTCTGCGGGCGCT
TTCTGTGAGGCGAGAGTTCATTCATTTCTTTGCAACAACGCCCCAGTGGT
CTAGTTGGTAACCTC

protein sequence of EsuBft100_17a-0001

>EsuBft100_17 ID=EsuBft100_17|Name=EsuBft100_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=510bp
MSAYVDDAPAADGRIVELAKQTTSRLEVLWDEVGYTSEEKRRQMQGLVDG
FQTLCENKEKQEEGVKSQFVTSIADAKDRIKTARKKLGQEHTEDSSTDDM
SLTDQLAYYEMEADAIKKMCKAQQEKFEKLSEELVHMSMVLGDDSDADLA
EWRDLESSLTNERLQAFKDKKTELNKATEDRMQTVASLVSTVQDLMEELK
IPAVTALDNRILGSLAIPSSAGVPVLQTTERTPSSVGIDRAALDELTAKH
EELIMQRNTRREKLEKMGEEILDLWQQLDIGKDEQDVFAKSVDGMGLQTL
EAGETELNRLRKLKLEKMGELVLASRAKIRELWDEIGYSETERLAFKPML
VTEEGFTDELLQQHTQEADKLAMKFETMKHILEKIEERETLVEQRIEYET
STKDPDRLRPKGSQQERRERRRRLQEELEAEKRIKNRLPMLTSSLSKTIP
QWENAQDSVFLYKGERYLDTLQRSEDEYLALKDQIKAAKAATKKVKRKNI
PLSYMSTGRG

mRNA from alignment at Scaffold_441:269191..274220-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft100_17a-0001 ID=EsuBft100_17a-0001|Name=EsuBft100_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5030bp|location=Sequence derived from alignment at Scaffold_441:269191..274220- (Ectocarpus subulatus male Bft15b)
GTAGCGGCACCCAGACCAGCACCACGGCCAACACTGGGTACCCGCGCCGT
ACACCAGAGAAAAGGCTTTCTTTCACGCCTGTGGATTGTCTCGTTTGATT
GGCACTCTAGTCAGCTTTGCTCGGAGCGTACCATCAAGTGATTGCTCGAC
TCGTGCTGGAGAGCGAGAGGAACCTTGTAACGCAATGTCTGCGTATGTTG
ACGATGCGCCTGCTGCTGATGGGCGTATCGTGGAGCTTGCGAAGCAGACC
ACTTCTCGGCTCGAGGTGCTCTGGGATGAGGTTGGGTATACCTCCGAAGA
GAAGCGTCGTCAGATGCAGGGTCTTGTCGATGGATTTCAGACTCTGTGCG
AGAACAAGGTGCGTTTGTCGTTACCTACACACTCGTCAACTATTTTGTAA
AGCTGGACTTCGTCGAGGCACTGCTGTAGTGTGTCTTCAGTATAGCTCCT
CCTCACGCGAGCCCGACCGCAAGGTAATGCCATGCCAACCAGTTACTCTG
TGGAGGGATGCGCCGATATCAGCTAGTTGACAGCATCGTGGTCAATAGTT
GGATGATATTGACTGGCAACAATATGTTGCTGCACGCTTCGCCGGCTCCG
TTCCCTCAGGAAAAGCAAGAGGAGGGTGTGAAAAGCCAGTTCGTGACTTC
TATCGCGGACGCAAAGGATCGAATCAAGACCGCCAGAAAGAAACTCGGAC
AGGAGCATACAGAGGTGTGTTGACGATATTTGATGTCCACTTAGTTCGTG
AGGACGGCCGAAACCTACTCCTATTCTAGCGCTCTAAGATATTGTAGAGT
CACACCGCCGTATCATGAGTATCCATGTGTTTGCCCTGTTGTAGACACCG
GCATCCTGCCGTATACTGGAACATTTCATTCACCCTGTCGCTTGCCCCGA
TTTGTCCACCATTCCCTCCTCTCAGGACTCCTCCACAGACGACATGAGCC
TCACGGACCAGCTTGCCTATTACGAGATGGAAGCAGATGCAATCAAGAAG
GTGGTTATTTCGTTTGTTCACGGGCACAGGGGGCGGCCGAGCAAGTGCTT
TTTTGACGCATCATATGGGTACAGACAGCCGAAGCGTAGAACTTGTAGTC
CATCGTATGCATACATGCTGCCGTGAAATGATTGCACAAGGCTGTAGTCG
TGTTGGTAGAAGCCTCTAGCGACAAACTTGATGTGCTGTCCGTTGGGAGA
AGATTGACAACGTGAGACGCCCGGCAAGTCGGCGCGCGTATTATGGTACA
ACAACAAAAGCGCGATTTACACAACCGCAGGAGAGCGTGAACGAGTACAA
AGCTACAGACAGATTTGCCACTACTGTTATATAAGGGTGTGCCGGGCCTC
TCCTTTGACAGATGTGCAAGGCACAGCAGGAGAAGTTCGAGAAGTTGTCC
GAAGAGTTGGTGCACATGAGCATGGTGCTGGGAGATGACTCTGATGCCGA
CCTGGCTGAGTGGAGGGACCTCGAGTCTTCCTTAACCAACGAGAGGCTCC
AGGCCTTCAAAGACAAGAAGACAGAGCTCAACAAGGCCACGGTGAGCTTT
CGATCCATGGAAATATTGTTATGAAATGTGGAGAACCCGCTAGGGGCGTA
TCAAGTTCCGAACCAAATAAAGAGTCTGGCGGATCCTGCCAACATCGCAC
ACCTCGTCCTGCTTCATGCCAACCACACCCGCACGTTGTGATCGTTGCAC
GTCGTTTCCTTTCCACTGAGTTGTTCAACTCATGAACCGCTTGCTGTTGG
TCTGAATCACCAGGAGGACCGCATGCAGACGGTAGCATCACTGGTGAGCA
CGGTGCAGGACCTGATGGAAGAGCTCAAGATCCCTGCAGTGACAGCCCTG
GACAACCGCATCTTGGGCTCGCTGGCAATCCCATCCTCTGCCGGAGTACC
AGTTCTTCAAACAACCGAGGTATCCTTTCGCCTTGTCGGCTGCGAGATTT
TGTTGGGCAAGTTTTTTTTGGTGCCTACGCCAAATCTCGTTTGTGATTCA
TGCTGGAATATGTCAACCCGTTTGTTTGCTCCCACAGCGAACGCCATCGT
CTGTGGGCATCGACAGAGCCGCGCTGGACGAGTTGACTGCGAAACACGAA
GAGCTCATCATGCAGAGGGTGAGCACGACATTGGGATATTTTTGGTTTCC
AAGTCTCGATGAAATGCTACTAGGGTCGAAGGGGACCCTTCGATCCAAAT
CCTTCCAGAAGACCATCTCTTCAAACAAGGCAAATGAAATGAAGCAGATG
TCCTTTCCCGAGCGGCGGTTTTGAAAAATTAAAAAGATTGACCCGTCAAA
CGTATTATAACCTTGTCCAGAACACTCGTCGGGAGAAGCTGGAGAAAATG
GGCGAGGAGATACTGGACCTTTGGCAGCAGCTGGACATCGGCAAGGATGA
GCAGGTGCCTCTCGTTTCAATGATTTTGCTATGTGGTATGTTAAGAGACG
AAAGGTATCCTCGACAACGGTTTGACATTGCCATACGCTCTGTCAGCGTG
TGGGAACGCCTGCGAAGTGTTGCGACCCTGAGGAGGGTACTCGGTCGGCG
CAAAGATCCGTGCTTCGCGTCTCCCGAGGCTGCCTCGCCCGATACCCTGC
GACACCGCCGTCAAACAGAATTGTATCAGAAGGTTCCGATTGCGCCTCTC
TGGAAACCAGGGGCCGTCAACAACACAACACCGATGGCGTGCGTCCTAAA
CATGAGCGGTATATGACCCGTGAGGCACCCGATGGCGTATTCACATTACA
CCGCTAATGTACGAACCCATTACATGCGTTGCTAGAAGGCCAAGGACAAG
TTAGAAATCAGAAACGCTAATTTAGTGGAGATCCATCCCCTCCGGTTCGC
GCAGGATGTGTTCGCTAAGAGCGTGGACGGGATGGGGCTACAGACGCTGG
AGGCTGGAGAAACGGAACTCAACCGCCTCCGGAAGCTTAAGCTCGAAAAG
ATGGGAGAACTCGTGCTGGCGTCCAGGGCAAAGATCCGAGGTATGCATAC
AGCGGGCACCCGGGAAGGTTTAGTGTGCGTTGATGCCGATGATTTGTTCC
TCTTTCTCTTTGGACCACTGGACTTCGCTACCAAATCGAGTATCTTCGGC
GAGGGCTTGCCATGTCAACGAAATGTCGAGCGTGCTGCAGCCACCGCGTT
GCGAACGGACCGTTCAAATGAGATTTTAACAGCGATGCCCAAATTCAAAG
CGTTTATTTTGCCGTTGTCCCGACATGCGTGATTTCGCCATAGAACTCTG
GGATGAGATCGGATACTCCGAAACCGAGCGGCTTGCGTTTAAGCCAATGC
TGGTCACCGAAGAGGGTTTCACGGACGAGCTCCTGCAACAGCACACACAG
GAAGCGGACAAGCTGGCCATGAAGTTCGAGACCATGAAACACATCCTGGA
GGTGAAGTGGCCAGCATCCTTATCCTTGGGTGTAGACGTTGTCGAGGCTC
TCGAGGGTGCCAACAGTGAAGGTGGAGATATTTCCCTACTCACGGGTTGG
AGTATACGCCGTTGCCTGCCTGACCTGGTGTATTCCACGCCGCACCCTTC
GTTGCCCTTTGCAGAAAATTGAAGAGCGCGAAACCCTTGTCGAGCAGCGA
ATCGAGTACGAGACCAGCACGAAAGACCCGGATCGCCTCAGGCCTAAGGG
CAGCCAACAAGAGCGCAGAGAGCGACGCCGAAGGTGAGGTCGCCCCATCG
AACTTTGTTTGCCCTAGGAACCGTACTGCGCGAGTAGAAGTGGCAACGGT
GGAAGGTGGTGCAACGAAAGGGTCTCGTTCGAAACACATCTCACGGAGTA
TCGTGAAGAGTTGTCAACGAGAATCGAGGATGTAAAGGTTGCGACAGCGG
GTGATTTGGCGTATGCATCTTGTTTTCGCTTTTTGCCTTTCTTATTTGCA
ATGCTGCATTCAACACGCGCTTGTTGATACTGGCTTTGTGTAGTTGCGCG
AGTTTATCTGATCCTTGGGTACCGTCCCCTCCTTCCAGGCTCCAGGAGGA
ACTCGAGGCGGAGAAGCGCATCAAGAACCGTCTCCCAATGCTCACGAGCA
GCCTGTCTAAGACCATCCCCCAGTGGGAGAACGCACAAGACTCGGTGTTC
CTGTACAAGGGCGAAAGGTAACATTTACACCTAGCTTGTGAAAAATACTC
AAAAGCAATTCGGATGAGTCGTTCACAAGTTCACAAGCAGCCTCTTTCGG
GTGCACTACAGCAGTACTGGGGTAGTATGTGATGACACGAAAAGGGTCTG
TTTCTTTTTTCCCGCAAGGCTCGAGTGCTGTGTGTCCCCCTTGATCCCGC
CGTGGTCTCGGCGAGCATTTACGCTGGCTGTGAAGTTTAAGGTCGAAAGC
TACCTCCGTCGGTGCTGTCGCACGATCATTACTGCATACACCCTAAATGG
TGTGAACCCATCCATCAATAACCGTGTGCCCGACCCTACTGTAATCTTGA
ATAGTAAAACATACATCACTTGTCTATTTTCTTGCGGCATGCAGTCGATC
GCCGCCCCAATGATGTCCCACTTTAGCTTTGTGTCGTACAGGCAGGTCAA
CCCGTGGCACTCATAGAGTAGTCGACGGGGCACTACGCCTTTGTGCTTGT
GCGATGGCTGCAGCTTCACTTGTGAACGCATATCGATATTTCTCTTGTGG
CTTTGTCAGTACCACGGTAGTTTTGCAGCGTGGAACCCCAGTGATGATGC
AAAAGTTTTGGTGCTCACAGGTGTCGAAATATTTTGCGTCACTCGAGGTG
TTAGTTCGTAACCGAACGCACGTATGGGATCAAATTTCAATGTCAGGTAC
TTGGATACCCTGCAGCGGTCGGAAGATGAGTACCTAGCTCTCAAGGACCA
GATCAAGGCTGCCAAGGCTGCCACCAAGAAGGTAAAACGCAAAAACATAC
CCCTGTCCTATATGTCGACCGGCCGCGGTTGAATCGCGCTTGGATTGCTG
CACTCTGCGGGCGCTTTCTGTGAGGCGAGAGTTCATTCATTTCTTTGCAA
CAACGCCCCAGTGGTCTAGTTGGTAACCTC

Coding sequence (CDS) from alignment at Scaffold_441:269191..274220-

>EsuBft100_17a-0001 ID=EsuBft100_17a-0001|Name=EsuBft100_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1533bp|location=Sequence derived from alignment at Scaffold_441:269191..274220- (Ectocarpus subulatus male Bft15b)
ATGTCTGCGTATGTTGACGATGCGCCTGCTGCTGATGGGCGTATCGTGGA
GCTTGCGAAGCAGACCACTTCTCGGCTCGAGGTGCTCTGGGATGAGGTTG
GGTATACCTCCGAAGAGAAGCGTCGTCAGATGCAGGGTCTTGTCGATGGA
TTTCAGACTCTGTGCGAGAACAAGGAAAAGCAAGAGGAGGGTGTGAAAAG
CCAGTTCGTGACTTCTATCGCGGACGCAAAGGATCGAATCAAGACCGCCA
GAAAGAAACTCGGACAGGAGCATACAGAGGACTCCTCCACAGACGACATG
AGCCTCACGGACCAGCTTGCCTATTACGAGATGGAAGCAGATGCAATCAA
GAAGATGTGCAAGGCACAGCAGGAGAAGTTCGAGAAGTTGTCCGAAGAGT
TGGTGCACATGAGCATGGTGCTGGGAGATGACTCTGATGCCGACCTGGCT
GAGTGGAGGGACCTCGAGTCTTCCTTAACCAACGAGAGGCTCCAGGCCTT
CAAAGACAAGAAGACAGAGCTCAACAAGGCCACGGAGGACCGCATGCAGA
CGGTAGCATCACTGGTGAGCACGGTGCAGGACCTGATGGAAGAGCTCAAG
ATCCCTGCAGTGACAGCCCTGGACAACCGCATCTTGGGCTCGCTGGCAAT
CCCATCCTCTGCCGGAGTACCAGTTCTTCAAACAACCGAGCGAACGCCAT
CGTCTGTGGGCATCGACAGAGCCGCGCTGGACGAGTTGACTGCGAAACAC
GAAGAGCTCATCATGCAGAGGAACACTCGTCGGGAGAAGCTGGAGAAAAT
GGGCGAGGAGATACTGGACCTTTGGCAGCAGCTGGACATCGGCAAGGATG
AGCAGGATGTGTTCGCTAAGAGCGTGGACGGGATGGGGCTACAGACGCTG
GAGGCTGGAGAAACGGAACTCAACCGCCTCCGGAAGCTTAAGCTCGAAAA
GATGGGAGAACTCGTGCTGGCGTCCAGGGCAAAGATCCGAGAACTCTGGG
ATGAGATCGGATACTCCGAAACCGAGCGGCTTGCGTTTAAGCCAATGCTG
GTCACCGAAGAGGGTTTCACGGACGAGCTCCTGCAACAGCACACACAGGA
AGCGGACAAGCTGGCCATGAAGTTCGAGACCATGAAACACATCCTGGAGA
AAATTGAAGAGCGCGAAACCCTTGTCGAGCAGCGAATCGAGTACGAGACC
AGCACGAAAGACCCGGATCGCCTCAGGCCTAAGGGCAGCCAACAAGAGCG
CAGAGAGCGACGCCGAAGGCTCCAGGAGGAACTCGAGGCGGAGAAGCGCA
TCAAGAACCGTCTCCCAATGCTCACGAGCAGCCTGTCTAAGACCATCCCC
CAGTGGGAGAACGCACAAGACTCGGTGTTCCTGTACAAGGGCGAAAGGTA
CTTGGATACCCTGCAGCGGTCGGAAGATGAGTACCTAGCTCTCAAGGACC
AGATCAAGGCTGCCAAGGCTGCCACCAAGAAGGTAAAACGCAAAAACATA
CCCCTGTCCTATATGTCGACCGGCCGCGGTTGA