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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | EsuBft1007_10 |
Protein domains | TMhelix |
Owner | apollo_admin@sb-roscoff.fr |
Note | probable autotransporter rod [Automatic annotation] |
Nb exon | 1 |
Length | 2658 |
Hectar predicted targeting category | other localisation |
Date last modified | 2016-06-13 |
Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1007_10a-0001 ID=EsuBft1007_10a-0001|Name=EsuBft1007_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2658bp|location=Sequence derived from alignment at Scaffold_519:242931..245588+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTCCTCGTAGTGAGCGGCGGCATGTTGGTGGAAGGCGCGGCACCGGG CGGCACGGCGGCGGGAGACGGTATTACTGACGGTGCAGCGGCGGTGGTGA ACGGTGAGGCCGGAGGCGAGGCGGCAGTGGTGAACGGTGTCGCGGCGGCG AACGGCGGTGCAGGCGGCGCGGTGGTGGTGAACAGTGGCGCGGCGGCGAG CGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCG GCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGC GTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGT TGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTG CAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCA GGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGG CGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCG GCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGC GCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGC GGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGG TGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTG GTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGT GGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGG TGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTG AACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAA CGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACG GTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGT GGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGG CGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCG CGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCG GCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGC GGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGG CGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCG AGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAG CGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCG GCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGC GTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGT TGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTG CAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCA GGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGG CGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCG GCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGC GCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGC GGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGG TGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTG GTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGT GGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGG TGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTG AACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAA CGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACG GTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGT GGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGG CGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCG GTGGTGTGGCTGCGGTAGACGGCGCCGCCGGCGATGGTGGTGTGGAAGTT GCCGGCGGCGCCTGTGAGAGTATGGCAGCGGGTGAAGTGGGAGGTCGGGC ATACGGTGAGGGGGGTAAGAGAGGCGGTGAAATATACTCAATTAGAAACG GTGCGGCGGCGACATTCGAATCTCCCCCCTCGTCCGCCGGCGCCGGCAGC TCCAGCGGCGGGGTCAGCAACGGCGCGCGGTCGGAGACCCACACGACGTT GTTCGTCATGCACACGCGCCCCGTCGCGAACTTGAGGACCTTGACCGCCG ACTCGTGA back to topprotein sequence of EsuBft1007_10a-0001 >EsuBft1007_10 ID=EsuBft1007_10|Name=EsuBft1007_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=885bp
MVLVVSGGMLVEGAAPGGTAAGDGITDGAAAVVNGEAGGEAAVVNGVAAA NGGAGGAVVVNSGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASG VAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVA GGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGG AVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAV VVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVV NGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNG GAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGA AASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAA SGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASG VAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVA GGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGG AVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAV VVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVV NGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGAAASGVAGGAVVVNG GAAASGVAGGAVVVNGGAAASGVAGGAVVVNGGGGVAAVDGAAGDGGVEV AGGACESMAAGEVGGRAYGEGGKRGGEIYSIRNGAAATFESPPSSAGAGS SSGGVSNGARSETHTTLFVMHTRPVANLRTLTADS back to topmRNA from alignment at Scaffold_519:242931..245588+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1007_10a-0001 ID=EsuBft1007_10a-0001|Name=EsuBft1007_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2658bp|location=Sequence derived from alignment at Scaffold_519:242931..245588+ (Ectocarpus subulatus male Bft15b) ATGGTCCTCGTAGTGAGCGGCGGCATGTTGGTGGAAGGCGCGGCACCGGG
CGGCACGGCGGCGGGAGACGGTATTACTGACGGTGCAGCGGCGGTGGTGA
ACGGTGAGGCCGGAGGCGAGGCGGCAGTGGTGAACGGTGTCGCGGCGGCG
AACGGCGGTGCAGGCGGCGCGGTGGTGGTGAACAGTGGCGCGGCGGCGAG
CGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCG
GCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGC
GTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGT
TGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTG
CAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCA
GGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGG
CGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCG
GCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGC
GCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGC
GGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGG
TGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTG
GTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGT
GGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGG
TGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTG
AACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAA
CGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACG
GTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGT
GGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGG
CGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCG
CGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCG
GCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGC
GGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGG
CGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCG
AGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAG
CGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCG
GCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGC
GTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGT
TGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTG
CAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCA
GGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGG
CGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCG
GCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGC
GCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGC
GGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGG
TGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTG
GTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGT
GGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGG
TGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTG
AACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAA
CGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACG
GTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGT
GGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGG
CGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCG
GTGGTGTGGCTGCGGTAGACGGCGCCGCCGGCGATGGTGGTGTGGAAGTT
GCCGGCGGCGCCTGTGAGAGTATGGCAGCGGGTGAAGTGGGAGGTCGGGC
ATACGGTGAGGGGGGTAAGAGAGGCGGTGAAATATACTCAATTAGAAACG
GTGCGGCGGCGACATTCGAATCTCCCCCCTCGTCCGCCGGCGCCGGCAGC
TCCAGCGGCGGGGTCAGCAACGGCGCGCGGTCGGAGACCCACACGACGTT
GTTCGTCATGCACACGCGCCCCGTCGCGAACTTGAGGACCTTGACCGCCG
ACTCGTGA back to topCoding sequence (CDS) from alignment at Scaffold_519:242931..245588+ >EsuBft1007_10a-0001 ID=EsuBft1007_10a-0001|Name=EsuBft1007_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2658bp|location=Sequence derived from alignment at Scaffold_519:242931..245588+ (Ectocarpus subulatus male Bft15b) ATGGTCCTCGTAGTGAGCGGCGGCATGTTGGTGGAAGGCGCGGCACCGGG CGGCACGGCGGCGGGAGACGGTATTACTGACGGTGCAGCGGCGGTGGTGA ACGGTGAGGCCGGAGGCGAGGCGGCAGTGGTGAACGGTGTCGCGGCGGCG AACGGCGGTGCAGGCGGCGCGGTGGTGGTGAACAGTGGCGCGGCGGCGAG CGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCG GCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGC GTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGT TGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTG CAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCA GGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGG CGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCG GCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGC GCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGC GGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGG TGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTG GTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGT GGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGG TGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTG AACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAA CGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACG GTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGT GGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGG CGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCG CGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCG GCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGC GGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGG CGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCG AGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAG CGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCG GCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGC GTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGT TGCAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTG CAGGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCA GGCGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGG CGGCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCG GCGCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGC GCGGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGC GGTGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGG TGGTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTG GTGGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGT GGTGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGG TGAACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTG AACGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAA CGGTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACG GTGGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGT GGCGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGG CGCGGCGGCGAGCGGCGTTGCAGGCGGCGCGGTGGTGGTGAACGGTGGCG GTGGTGTGGCTGCGGTAGACGGCGCCGCCGGCGATGGTGGTGTGGAAGTT GCCGGCGGCGCCTGTGAGAGTATGGCAGCGGGTGAAGTGGGAGGTCGGGC ATACGGTGAGGGGGGTAAGAGAGGCGGTGAAATATACTCAATTAGAAACG GTGCGGCGGCGACATTCGAATCTCCCCCCTCGTCCGCCGGCGCCGGCAGC TCCAGCGGCGGGGTCAGCAACGGCGCGCGGTCGGAGACCCACACGACGTT GTTCGTCATGCACACGCGCCCCGTCGCGAACTTGAGGACCTTGACCGCCG ACTCGTGA back to top
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