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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7FWK2 |
ProteomeId | EsuBft1005_2 |
Protein domains | NON_CYTOPLASMIC_DOMAIN |
Protein domains | Coil |
Protein domains | SIGNAL_PEPTIDE |
Protein domains | SIGNAL_PEPTIDE_C_REGION |
Protein domains | SIGNAL_PEPTIDE_H_REGION |
Protein domains | SIGNAL_PEPTIDE_N_REGION |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 7 |
Max annot lvl | 2759|Eukaryota |
Length | 218 |
Hectar predicted targeting category | other localisation |
Evalue | 7.37e-100 |
EggNOG OGs | 2CNI7@1|root,2QWH7@2759|Eukaryota |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1005_2a-0001 ID=EsuBft1005_2a-0001|Name=EsuBft1005_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2186bp|location=Sequence derived from alignment at Scaffold_576:259489..264804+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGCGCCGTCCGTCCCTATCCCAAGCAGGAAGGGTTCAACGTCGCCCATGA CCGCTGGTAGGGAAGCGATGGACGACAGCATGGTGGCGGAGGCAGCGGCG ATGGCAGCGCTAGCGGCGTCCATGGCGCCATCGGAGATCCAGGGGGCAAT GGCGAAGGGGGACTTAAAGCAGGGCTCTTCACACGGCACGGCATCGTCCA GCACTTCGTCTGCAACGGGTGGCGGCGCGGCGGCGGCAGCGGCGGCAGCG ATGGCAAGCCTGTCGAATCCCCACCCGACAGCAATGAAAAAGAATCACAG CTTTATGACCAAGTTCAAGGGACTGCTGAGCCAGTCTTCCTCATCCAAGT CCGACAGCTCCCCGCTTTCCCCCCTAGCGGCGGCGAGAGAGTCTGCTACA AACCCGACTGTGGCCTACACACCGCGAAGCTCCCCCAAGGACGCCGCCGC AGGCGCTGGAACCGCAAAGGCGGGGGAGGATCATCCACCCTCGCGTTCGG AGCGGGGTGGGACTGATCCGGATTCCGCCGCCGGGGGGGGGAGTTCCGTT GTTCGTCCGGCGTTTTCTGGGGGGGAGGAGAACGGCGCGGTCCAGGAGAT GCGGGCGGAACTGTCCGTCTTGATCGACGCCTTCCAACAAAAGTCGGAAT CCTTGAGCAACCGTCTCACCGAGGTAGCCGTGGAGAAGGCGGCCCTGGAG TGCAGCCGGACCTCGCTGGGAAGCTCCCACGCCGAGGGCATAAGGCGGCT GGCGGAGGCGGAGTTCGAGCAGCAGCGATTGGCCGACGAAGAGGACTACG AAAAGGCGGCGGAACTGTCGCTGGAGATCGAGAACCTCAGGGAAGAGTCG GCTTCGGCGGCACGCCGTCTCAGGCGAGTCATTCGTTCCCGCGACGACAC CGAAGAAAGCATGCGGAAAGCCTTAGCCCTTACAACTCCCCTGGAGCTCG AGGAGGACGGAGGTTCGTTGGATCGGTCATCCGCGGAGGCCAGGCAGGAG CTTCTCGCTGCTGTGGAGGAGACCACTCGCGGGTTGAAAGTCTTCCAGGG CAAACAGGGCTAAACTCACCCTCAAGGGATGACCGAAACCTTCTTGCTGC TGCGCATCCGCCGCGAGGCGTGCGTGTGGTGGTGGAGTTGGGTCGGCACT GATGGGGTCAGGCGGGAAAATGTAGATGCGCGGGCCTTTCTGGCCGTCGG CGTAGGCAGTGATGCCCATCTCATTTTTGTGCGCGGAGGCAGACACCATC AGAAAGGTGGACGGGCACTACACGGCCCTAGGTTTGCTAGAGGGAGCTGT ATTGCCTCAGTAACCTGGCTTCGCCATCAAAGGAGGAGGGAGCAGGTGGC GACGAGCTGAACTGGGCTGGTTGACCATTCGGCGCGAGAATTTTTATTTT TTTCAGACCAAGAACCTTGAGTGCAATGTGGGAGAAAGCGAGGAACGGAC TGGGAAGGACAGCAACGAGAGCGTGTACGGACGGAGCAGGTCGAGTGGCG TTTTGCTCGGGCTGACTACAGCGGCGCCGGATGGAGCAATGGCACCGGAG CATGCGGGCGACATCGACCCGTGGCGCACGGACAAACATTTCTATCTGTG TTGTCATTTTTTTATTTTTTTCTGACTTTCCGTGTGTCGGTGTTGGTTCT ATGTGATGACGTCGTCACTGGTTTTGTAGAGAGACCCGTCAGAGATGGCG TGGCTAACCCGGGTGCCTTGGTTATGTGCCTGATCGTGGAAGACCCCTTC AATGTGGAACGATTCTTAGCTATTGTCGATATTTTCACTGCGTGCCTAAC ACAGACGATCGGGAGAGATTCGGGTGATTGTCAATTGCTGCTATGATGGC TTTGGTTGGTTGTTCTCTTTCACTGTACGACCGCAGACAAATTCTGACAG CACTTCAGACAGCAGCTTTGTGCCCCGCCAGCTGCTTGTTCCATGCCTAC CATGGTGTTTTTGTACAGACAGCACTTCAGACAGCAGTATGCTGTAGTCG GCAATCTTCCGTTTTGGTATCGAGTGGAACAGGGAGGGGGTGATGCTACT GTATAGTCGAACGGTGGGACGGACGTGCAGTTCAGTTTTTGGGCACGCAT ACGGTGCTGCAGGGATTTTTACGTGTACCTCTTCGGGCTCTTGGATACCT TTTCCGCGTTATATGTGTGCGTGTTCTTTAGATCCT back to topprotein sequence of EsuBft1005_2a-0001 >EsuBft1005_2 ID=EsuBft1005_2|Name=EsuBft1005_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=338bp
MTAGREAMDDSMVAEAAAMAALAASMAPSEIQGAMAKGDLKQGSSHGTAS SSTSSATGGGAAAAAAAAMASLSNPHPTAMKKNHSFMTKFKGLLSQSSSS KSDSSPLSPLAAARESATNPTVAYTPRSSPKDAAAGAGTAKAGEDHPPSR SERGGTDPDSAAGGGSSVVRPAFSGGEENGAVQEMRAELSVLIDAFQQKS ESLSNRLTEVAVEKAALECSRTSLGSSHAEGIRRLAEAEFEQQRLADEED YEKAAELSLEIENLREESASAARRLRRVIRSRDDTEESMRKALALTTPLE LEEDGGSLDRSSAEARQELLAAVEETTRGLKVFQGKQG back to topmRNA from alignment at Scaffold_576:259489..264804+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1005_2a-0001 ID=EsuBft1005_2a-0001|Name=EsuBft1005_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5316bp|location=Sequence derived from alignment at Scaffold_576:259489..264804+ (Ectocarpus subulatus male Bft15b) GGCGCCGTCCGTCCCTATCCCAAGCAGGAAGGGTTCAACGTCGCCCATGA
CCGCTGGTAGGGAAGCGATGGACGACAGCATGGTGGCGGAGGCAGCGGCG
ATGGCAGCGCTAGCGGCGTCCATGGCGCCATCGGAGATCCAGGGGGCAAT
GGCGAAGGGGGACTTAAAGCAGGTGAATCCCAACCGCCGCGTCCTTCGCA
TCCGGGTTTTTTCCTTATTCTTGGCGGCGGGGACAACGGTGGTAATGTGT
ATTGTGAATCGCCTTTTAGGGCTCTTCGCAAGGCACGGCATCCTTCAGTG
CCTGAAAAGACCTTGTACCATTGTACCCCCCCCCCTTTTCTTCAGATCCT
GCCTTAGGGCGTCGTGCTTCTGAAAAGAATGGCGTTCTTAAAGCGTGGAC
GACGGTTGTGCTGTTTCTCGTGACCCCCCCCCCCCCCCCCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCCCCCCAGGGCTCTTCACACGGCACGG
CATCGTCCAGCACTTCGTCTGCAACGGGTGGCGGCGCGGCGGCGGCAGCG
GCGGCAGCGATGGCAAGCCTGTCGAATCCCCACCCGACAGCAATGAAAAA
GAATCACAGCTTTATGACCAAGGTGAAGAGAGAAGCGAAGTTTGTAGAGA
ACCCCGAGCGTTGCCCCGGGAACCGCAGTAACAACTCGTTCAGAAAGGCA
GAGCACATAACATCCTGCCTCCTATCACTGAGGTAGGAGCAGCAATACCC
AGATGAATCGACAGCTTGACCTTGTGTTTTTTTTTTTTTCTAAGGAATCG
TGCCTTTCTGGACTGCTGCGCTTGCAGTTTACCTCGCCGGTTTGATCAGT
CGACAGGATTGGAGGGACTGCCTGTGCACCGGTGAAGATCTTTCATTGTG
ACGGCAACAAGGCAACCAATAACACCAACGTTAATAACACCTGTGCAGGT
GTAGAGGGGGTGTGCGATCACTCTGACTTTCCGGTAGTATGCATACGCAA
GAGTTAGCAGTCACTGCTGTTATCCTTCCTGTCGGCCGGGTGCCCATATA
GATGTTTCCACGCTCGTGCAGACCCCACCGTCTCGCCGACCTTCCGGCCG
CCTCGCGTGCCTCCGACGCCGCTCCCGATCGCCCGCCCGCTGACGCACTC
GTTCCACGCACACAGTTCAAGGGACTGCTGAGCCAGTCTTCCTCATCCAA
GTCCGACAGCTCCCCGCTTTCCCCCCTAGCGGCGGCGAGAGAGTCTGCTA
CAAACCCGACTGTGGCCTACACACCGCGAAGCTCCCCCAAGGACGCCGCC
GCAGGCGCTGGAACCGCAAAGGCGGGGGAGGATCATCCACCCTCGCGTTC
GGAGCGGGGTGGGACTGATCCGGATTCCGCCGCCGGGGGGGGGAGTTCCG
TTGTTCGTCCGGCGTTTTCTGGGGGGGAGGAGAACGGCGCGGTCCAGGTG
AGGGAACTTTTTTTTCTTTTTTGCGTGTTGGACACTATTGGGTGTGTCGT
GGATGTACGGGTTTCGCTCTCGTCGATTGTGGCGGCTGTGAGCGTTACGC
AGAGCCGGGAGAGTGTGGGATAGGGGTGGGATGTGCTTTTATTCCGTGGC
TCGGTATCTATGCCTTGGTATTGATTCGTCGTGGTTGCAAGTATTGGTAG
GTCTTTCGCCTCGCCGGAGTTGTTTGTTGCCTGTCGATGAGCTGACGTAG
TGTTGCCTGCTAGTGAAAACTGCGGCAAGCCCGCAACTCCCGGCACGATC
ACACCTCTTGCGGAAACCCCGTTCGCGTTGGACATGCAGCCGTGTTACTC
TGGAAATGCTTGCCTTCGATGTGGGGTGTGTGAAAGGTAGCCATGACTAG
CGTTTTGTTCTCGTTGTTGACGATGTTGCCTTGTTTGTTGTTGATCATGG
TCATGATGTTGTCGTTTGTTGTTACTGCTCATGATGATGATGTTGTTCGT
TGTTGTTTTCGGTTGCTGTTGATAATGGTCATGGTACTGTCGGTTGTTGT
TGTTGCTGATGGTGATGCTGTCGTTTGTTGTTCGTCTTTTGGTTGCGGCC
CCCCTGCAGGAGATGCGGGCGGAACTGTCCGTCTTGATCGACGCCTTCCA
ACAAAAGTCGGAATCCTTGAGCAACCGTCTCACCGAGGTAGCCGTGGAGA
AGGCGGCCCTGGAGTGCAGCCGGACCTCGCTGGGAAGCTCCCACGCCGAG
GGCATAAGGTTTGCATACAGTCGTGGCCCCGATTTACGAGGGTACCTTAC
AAGAGGGGGCTCCGGTGTGTGAGCGTCGAAATCGGTTGTCACGGGCTCGA
CCCGGAATAGCATAGTTGGGTACCCTCTTGTTCCGGTAAAAGAGGGGGCT
CAGACATGCGAGGGTCGAGGGCCTTAATCACACCACCTTTTGGTGTCGGA
GCCGCAATTGTAGATATGGATGGAGCGCAGCAATGGTTTTCATGTTCTCA
GGGCATCGGGTACGGGTTGGAACAGCTTGAGGTGTTTCATGTTATCGGGC
ACACAAACGATGCGTTATTACCGGGAGATTTTCCCCTCCGCCGCTTTCAG
CAGGGGTTGTGAAAGTGAGTCGTGTGTGTTCCTCCTTCGGTCAACGTCCC
TCCAAGCAAAGACGATGGCTGTGTGCCGGTTCCTTGTTCGGTGGGGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGCGCGCGCGGTTGCTCCCA
CGCAGGCGGCTGGCGGAGGCGGAGTTCGAGCAGCAGCGATTGGCCGACGA
AGAGGACTACGAAAAGGCGGCGGAACTGTCGCTGGAGATCGAGAACCTCA
GGGAAGAGTCGGCTTCGGCGGCACGCCGTCTCAGGCGAGTCATTCGTTCC
CGCGACGACACCGAAGAAAGCATGCGGAAAGCCTTAGCCCTTACAACTCC
CCTGTTTCTGATATATAGACTACACGGATGTTTGTGCTGCTGCTGGTGGT
TGAATTTTCGCGAGGAGCACGAAAATCCGTCGCTGGGTCGAGAGTGATTT
TTCACTTCGTTGTCATGCGAGTGGCGATAAATATTTCCTCTTCACTTGGG
GTCGGTTTTTATGAGGGTTTGATGCGTTTTCGCTGTAGTGCCCCGTAATT
GAGGAAGGTGTTTTGGTACAATCGTACAAGTAGAGCATTGGTGTTGTTTT
GGCTGCCGAGGGGTAGTATCCTATGGCTTCCCACAGTGTCGGCCATCTGG
CCATCCCCGTTGCGATTCCTTTTTTAGTGGCGAACAAGTCTCCGCCATTG
CTGTTTCGAGGTGCACGCCAACTCTGCTGTTGCTCTTGTCGCGACTCGTG
GTGTGTTTTCGCCCCTGCCTTTTTTTCTGTAGTGGTGAACAAGTCTCCGC
TTTCCTGTTTTGCAGGTGTTTGCGAAACCTGCGGTTGCCCTCACGGCGGC
TGCTTGTGTTCTTCTTTTCTCTAAATCTCTCCCTCCCTCCTTCCATCTCT
NCCCCCCCCCCCCCCCCCCTCTGTTGGTCTTGCCTCTCGACAGGGAGCTC
GAGGAGGACGGAGGTTCGTTGGATCGGTCATCCGCGGAGGCCAGGCAGGA
GCTTCTCGCTGCTGTGGAGGAGACCACTCGCGGGTTGAAAGTCTTCCAGG
GCAAACAGGTACAGGAACGATTGCAACCCTTCTCTCGTAAAAGACGTTGC
TTTGAGTCAGACCTCAGCCACGTTCTGAAATCGTCTCATCTTTCCAATCA
AGACGTGAGGTTAGTTATTTGCCGGGACACACAGTGCATGCTTCGATGAA
GGATGCCAACAGCAGCGACAACAGCAGCAGCAACAATTGAAACATAGATG
CAGAAGTAATCTGCTGTCCTGTTTGTGTTTGGGATGCTTTCGAGGAGGAG
AGCGCTTGAGGTGGTTGCCTTGTTGGCTAGTTGGTTGATTTTTCTGTGCG
AGTCGGGATAGTACCGCAAGTTGTCGTAGTATTACCGTAGTATTACCGTA
GTATTACCGTAGTATGTACCGTAGTATTACAGTAGTTTCAAGAGTGGTAC
CGTCGTTCTCCCTTCTTCCCCTCGCTCCTCGACAAGCTTTTGCTTAGACA
TGGGTTGTAGTGAAGGGGGGGTCTTTCTGGCGAGCAGGGCTAAACTCACC
CTCAAGGGATGACCGAAACCTTCTTGCTGCTGCGCATCCGCCGCGAGGCG
TGCGTGTGGTGGTGGAGTTGGGTCGGCACTGATGGGGTCAGGCGGGAAAA
TGTAGATGCGCGGGCCTTTCTGGCCGTCGGCGTAGGCAGTGATGCCCATC
TCATTTTTGTGCGCGGAGGCAGACACCATCAGAAAGGTGGACGGGCACTA
CACGGCCCTAGGTTTGCTAGAGGGAGCTGTATTGCCTCAGTAACCTGGCT
TCGCCATCAAAGGAGGAGGGAGCAGGTGGCGACGAGCTGAACTGGGCTGG
TTGACCATTCGGCGCGAGAATTTTTATTTTTTTCAGACCAAGAACCTTGA
GTGCAATGTGGGAGAAAGCGAGGAACGGACTGGGAAGGACAGCAACGAGA
GCGTGTACGGACGGAGCAGGTCGAGTGGCGTTTTGCTCGGGCTGACTACA
GCGGCGCCGGATGGAGCAATGGCACCGGAGCATGCGGGCGACATCGACCC
GTGGCGCACGGACAAACATTTCTATCTGTGTTGTCATTTTTTTATTTTTT
TCTGACTTTCCGTGTGTCGGTGTTGGTTCTATGTGATGACGTCGTCACTG
GTTTTGTAGAGAGACCCGTCAGAGATGGCGTGGCTAACCCGGGTGCCTTG
GTTATGTGCCTGATCGTGGAAGACCCCTTCAATGTGGAACGATTCTTAGC
TATTGTCGATATTTTCACTGCGTGCCTAACACAGACGATCGGGAGAGATT
CGGGTGATTGTCAATTGCTGCTATGATGGCTTTGGTTGGTTGTTCTCTTT
CACTGTACGACCGCAGACAAATTCTGACAGCACTTCAGACAGCAGCTTTG
TGCCCCGCCAGCTGCTTGTTCCATGCCTACCATGGTGTTTTTGTACAGAC
AGCACTTCAGACAGCAGTATGCTGTAGTCGGCAATCTTCCGTTTTGGTAT
CGAGTGGAACAGGGAGGGGGTGATGCTACTGTATAGTCGAACGGTGGGAC
GGACGTGCAGTTCAGTTTTTGGGCACGCATACGGTGCTGCAGGGATTTTT
ACGTGTACCTCTTCGGGCTCTTGGATACCTTTTCCGCGTTATATGTGTGC
GTGTTCTTTAGATCCT back to topCoding sequence (CDS) from alignment at Scaffold_576:259489..264804+ >EsuBft1005_2a-0001 ID=EsuBft1005_2a-0001|Name=EsuBft1005_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1017bp|location=Sequence derived from alignment at Scaffold_576:259489..264804+ (Ectocarpus subulatus male Bft15b) ATGACCGCTGGTAGGGAAGCGATGGACGACAGCATGGTGGCGGAGGCAGC GGCGATGGCAGCGCTAGCGGCGTCCATGGCGCCATCGGAGATCCAGGGGG CAATGGCGAAGGGGGACTTAAAGCAGGGCTCTTCACACGGCACGGCATCG TCCAGCACTTCGTCTGCAACGGGTGGCGGCGCGGCGGCGGCAGCGGCGGC AGCGATGGCAAGCCTGTCGAATCCCCACCCGACAGCAATGAAAAAGAATC ACAGCTTTATGACCAAGTTCAAGGGACTGCTGAGCCAGTCTTCCTCATCC AAGTCCGACAGCTCCCCGCTTTCCCCCCTAGCGGCGGCGAGAGAGTCTGC TACAAACCCGACTGTGGCCTACACACCGCGAAGCTCCCCCAAGGACGCCG CCGCAGGCGCTGGAACCGCAAAGGCGGGGGAGGATCATCCACCCTCGCGT TCGGAGCGGGGTGGGACTGATCCGGATTCCGCCGCCGGGGGGGGGAGTTC CGTTGTTCGTCCGGCGTTTTCTGGGGGGGAGGAGAACGGCGCGGTCCAGG AGATGCGGGCGGAACTGTCCGTCTTGATCGACGCCTTCCAACAAAAGTCG GAATCCTTGAGCAACCGTCTCACCGAGGTAGCCGTGGAGAAGGCGGCCCT GGAGTGCAGCCGGACCTCGCTGGGAAGCTCCCACGCCGAGGGCATAAGGC GGCTGGCGGAGGCGGAGTTCGAGCAGCAGCGATTGGCCGACGAAGAGGAC TACGAAAAGGCGGCGGAACTGTCGCTGGAGATCGAGAACCTCAGGGAAGA GTCGGCTTCGGCGGCACGCCGTCTCAGGCGAGTCATTCGTTCCCGCGACG ACACCGAAGAAAGCATGCGGAAAGCCTTAGCCCTTACAACTCCCCTGGAG CTCGAGGAGGACGGAGGTTCGTTGGATCGGTCATCCGCGGAGGCCAGGCA GGAGCTTCTCGCTGCTGTGGAGGAGACCACTCGCGGGTTGAAAGTCTTCC AGGGCAAACAGGGCTAA back to top
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