EsuBft1004_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1004_3a-0001 ID=EsuBft1004_3a-0001|Name=EsuBft1004_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1916bp|location=Sequence derived from alignment at Scaffold_442:38342..43965- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTTCGCGAAGCCGCGGCGACAATGTAGGGGGCAGGATGGTAAGGGC
TCGCAGCAGGGATGGCGGCGGCGGCACCGACGGAGTGTTTCCGGCCGTGG
ACGTGCATCCCCGATGGTGGAGCGAGTCGGATGGGAAAGTCGGGGGCCCA
TGCTCCGTTCGGCGTAGCAGTAGCGTCGGTATTCGCTGTTCCACTCCTCT
CGCTTGTGTGGCTCCCGGCCCAGCGTCTGGAGAATCTTCGGCAGCAGGAG
GACGAGGAGGAGGGGGGGTGTCGGCGTCGTCGTCTTCGCCGTCAGCAAGC
CACCTCTCTCCCTCCCGCGCCAGTTCCACCTGGGCCCTGCCGCGTTCCCC
GTCCCCTCGCCGCTCGCCACCACGAACGCCTCCTTCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAATTGTCCCGACCTCCTCCTCCTCCTCATCGGCC
CTCTCCTCGTCCTATTCCTCGTCTCCGGCATCGCCGGCCGATGGCAGCAA
CAACTTCAGCGGCGGCACCAGCAACGACAACAACAGCAGCAACAACGGCA
TCAGCAGCACCAGCACCAGCAGAGACGACGATGAAGGGTGGCCGGCCCCA
CACCCCTCCCAGGCCTACGTCGCCAAGGCGAGGTGCGGGCAGCGGTACGA
GCACGACGTGGAGACGGGGGGGGCGACACGGATAAGAGCGGTGGTGTCGG
ACCTGGACGGGACTCTGCTGGGGCCGGACAAGCTTGTGTCCGCCACCACT
ATGGAGGCTGTTCGAAAGGCTAGGGCCAAGGGCATCATCTTCGTGCCCGC
GAGCGGCCGCTCCAAGTCGGGCATGATATCCGCCATGGGGGAGTTGGGGC
AGGAGCTTCAGAGAGACGGATCCCCGTTCGTGTGCATGAACGGCCTGACG
GTGTACGGGCAGGGAGACGGCAACGGTGACCTGGGCGAGATCATTCACAG
CGAGCTCATGTGCCTGGAGCTAGCGGCCAGGGTTGTAGCCTTCTGGAAGG
CTCACCCCCTGGCGGAGGCGGCGGGAGTCTCCTTGTGCGGGAGCGAGGGG
GAGACCATTGTCGTAGAGACCCTTGACCCTCGGACTAGCAGAAAAGTTCT
CGGGTTCGAGTTGTTCGGGTTTTGGCCCTGCGACTCTCTCAGAGAAGGCA
GCTGGCAGGAAGCGATCGCCGGCGGCATGGGGCTTAACCGCCTCTACTTC
TGGGGACCAACTCGGGCTGCCGTCGATGCCTTTGAGGAGGACCTCAAAGA
GCATCTCAAGGACCACCCGGCAGAGTTGACGAGAGGGGTACCTGAGATGA
TAGAAGTCTTGCCACACGGGGCCTCCAAAGCAGTAGGCCTGGAGGCCCTC
CTGAAGACGCTAGGCGTTTCCCCTGAAGAGGTGCGTGGAGTGAGCGAGAC
AGTGAATTGGTGTCGTTTTGGCGTGGGAGTGGGAGGGTGGCGAGGGTGCA
TGCGGCAAGAGGTGATCGCCGTGGGCGACATGGAGAACGACGTGGAGATG
CTGCGGAGCGTGGGGCACGGGATCGCGATGGGACAGGCCTCCCTAGAGGT
GCGGCGGGCGGCGAGGTTCACTGCCCCCACCAACGAGTTGCACGGAGTCG
CCGTCGCGCTGGAGACGTTCTGTGGCATCTAGTTGCCGCTGCCGCTGCCA
CTGCCGACCCCCACCTCCCGCTTCGCCATAGGTGATGCGCGGGGTCGCTG
GCATCACCTGCGCACGTTCGTAGTATGATAGTACCACAGTTTTTTTAAAC
CTCGTTGTTGTGTCGTTTTTTTTGTTCTTCTCTCTCCGTGCGCATGATTT
ATTTTTTATTGACGTCTTTTTTCAGACACTTCTGTACAATTTACAGCCTT
TTTTCCATCGATTGCGCGGAAAAACCGCCTGCCTCGTTGACGACGAAAGA
ACTTCGTTTCTTGTGG
back to top

protein sequence of EsuBft1004_3a-0001

>EsuBft1004_3 ID=EsuBft1004_3|Name=EsuBft1004_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=543bp
MASRSRGDNVGGRMVRARSRDGGGGTDGVFPAVDVHPRWWSESDGKVGGP
CSVRRSSSVGIRCSTPLACVAPGPASGESSAAGGRGGGGVSASSSSPSAS
HLSPSRASSTWALPRSPSPRRSPPRTPPSAAAAAAAAAAIVPTSSSSSSA
LSSSYSSSPASPADGSNNFSGGTSNDNNSSNNGISSTSTSRDDDEGWPAP
HPSQAYVAKARCGQRYEHDVETGGATRIRAVVSDLDGTLLGPDKLVSATT
MEAVRKARAKGIIFVPASGRSKSGMISAMGELGQELQRDGSPFVCMNGLT
VYGQGDGNGDLGEIIHSELMCLELAARVVAFWKAHPLAEAAGVSLCGSEG
ETIVVETLDPRTSRKVLGFELFGFWPCDSLREGSWQEAIAGGMGLNRLYF
WGPTRAAVDAFEEDLKEHLKDHPAELTRGVPEMIEVLPHGASKAVGLEAL
LKTLGVSPEEVRGVSETVNWCRFGVGVGGWRGCMRQEVIAVGDMENDVEM
LRSVGHGIAMGQASLEVRRAARFTAPTNELHGVAVALETFCGI
back to top

mRNA from alignment at Scaffold_442:38342..43965-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1004_3a-0001 ID=EsuBft1004_3a-0001|Name=EsuBft1004_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5624bp|location=Sequence derived from alignment at Scaffold_442:38342..43965- (Ectocarpus subulatus male Bft15b)
ATGGCTTCGCGAAGCCGCGGCGACAATGTAGGGGGCAGGATGGTAAGGGC TCGCAGCAGGGATGGCGGCGGCGGCACCGACGGAGTGTTTCCGGCCGTGG ACGTGCATCCCCGATGGTGGAGCGAGTCGGATGGGAAAGTCGGGGGCCCA TGCTCCGTTCGGCGTAGCAGTAGCGTCGGTATTCGCTGTTCCACTCCTCT CGCTTGTGTGGCTCCCGGCCCAGCGTCTGGAGAATCTTCGGCAGCAGGAG GACGAGGAGGAGGGGGGGTGTCGGCGTCGTCGTCTTCGCCGTCAGCAAGC CACCTCTCTCCCTCCCGCGCCAGTTCCACCTGGGCCCTGCCGCGTTCCCC GTCCCCTCGCCGCTCGCCACCACGAACGCCTCCTTCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAATTGTCCCGACCTCCTCCTCCTCCTCATCGGCC CTCTCCTCGTCCTATTCCTCGTCTCCGGCATCGCCGGCCGATGGCAGCAA CAACTTCAGCGGCGGCACCAGCAACGACAACAACAGCAGCAACAACGGCA TCAGCAGCACCAGCACCAGCAGAGACGACGATGAAGGGTGGCCGGCCCCA CACCCCTCCCAGGCCTACGTCGCCAAGGCGAGGTGCGGGCAGCGGTACGA GCACGACGTGGAGACGGGGGGGGCGACACGGATAAGAGCGGTGGTGTCGG ACCTGGACGGGACTCTGCTGGGGCCGGACAAGCTTGTGTCCGCCACCACT ATGGAGGCTGTTCGAAAGGCTAGGTGAATGGCGGTGTTGGGGTTTTTATT TTGTGTTTTGGAGGTTGCCGATGTCGTGGTGCGGGTGGTCGAAGTCGTGT TTTTCTCTCGTTGCTGTTGTCGCTGTTGGTTTGAGGCGTTGGTGGCGGCG CATATGGTTTTGTTGCTTGTCCCTGTCAACAACGAACACGATTTTCTTTT TCTGCTACGACCAAGGATAGACCCTGAGACCACCAGTACCGAGCGATGTC CTCTGCTCGCGTTGTGTGCTTCCGATCCTCACCCGAAGGAGCTCGACACA AAGCGGTTTCGGTGGCGTTTCTTGTTTTTTTGTTTTTCACCAGGGCCAAG GGCATCATCTTCGTGCCCGCGAGCGGCCGCTCCAAGTCGGGCATGATATC CGCCATGGGGGAGTTGGGGCAGGAGCTTCAGAGAGACGGATCCCCGTTCG TGTGCATGAACGGCCTGACGGTGAGGGGCTGCTTAGAAAAATTCGCAACA ACATCGGTAACAAAAACAACGAACAGCGATTTCTACGACCGATGACACCC GCATGCGATAACGTGATCATCAGCTACCTGCTTGTGTCCTTCCATCATGA ACGGCGCGCGCCCTTGCCGCCAAAACCAACACACAAGGTGTACGGGCAGG GAGACGGCAACGGTGACCTGGGCGAGATCATTCACAGCGAGCTCATGTGC CTGGAGCTAGCGGCCAGGGTTGTAGCCTTCTGGAAGGCTCACCCCCTGGC GGAGGCGGCGGGAGTCTCCTTGTGCGGGAGCGAGGGGGAGACCATTGTCG TAGAGACCCTTGACCCTCGGACTAGCAGGTGTGAGATTTCCTCCAAAACG GAAACACTTGAAAATATATATATATATTTGCAAAACAGTTTGCGAACTAA CCCCAAATATAGAAAAGCTCATGTTTTCGGCTTAAGATTTTTATCTTGGC TAACTGGAAAACGGACAAGTGAAGATGAGAAGTTCAGAGTTCTATCTCCA GATGAAGGATGAAGGCAAATAAATGTACAGAGAAAAATGCGCGCTGACGA AGGCAAGCTGGACAATGATCCAGCTTTTTGCCGAACTCGGGTGCCAGGTA CCCACGCGGTACACGTCACGTGGCAGGGGGTAAAAGGCACATGGGCACGA GACGGTGCGAATGAAACACTGAGGAATACACACACTCAATCCTGAAATAT TCTCCAGCCGCTACGGTCGCTTGGAGCCAGACTACTCTAGCGGGACTCTA GCTCTCTGGTTCGTGAAAAGACTCAATTGACTGACGAAGCACGTGCTGTA AAGTAGGCAACAGTAGTTAACTGTGGTAGCACATGTCAACACGTGCTACA TAGAAAAGTTCTCGGGTTCGAGTTGTTCGGGTTTTGGCCCTGCGACTCTC TCAGAGAAGGTGAGAAGGACGCATCGGTACCCCTGGGTCTCGATGGGTAC TCGCATCCATGGCCAACGGCCCAAGGACAGACTCAAAACAGTGAGCAGGA TTTGACACCGCTCCGTCGCTCAACCCACCCCCGCCCTCGCCCTACGACTT CATGGTGTCATGCACGGGCGCTCTCGGTTCGGTGGTTGTCTGCCAGCTTT CCTGACTGGGGGGAGCCGTTGCCGAAGGAGGTGAGGCCTTTTGATGTGTG ACGACGGCTACACGACATCGAGGGCGGCTGGGGGTGCAGGGACAGCCCAG ATGGTGTTGGCTCAGGGTAGCTAGCTTTGGCGCCATCATCCTTCCGATGG GAACAACCGCGAGGATCGCTCGAGGAACCGCCGCTGTAGCGTGAAAAACG GCCTGGCTTCCTCTGGCAGTGAAATACCGCTGCTTACAGCGAGCCGTGTT TGTCGCTGACTGTTTCCAGCATCCCTTTCGCCACCGATCACAGTTAAAAT CCGGCGGGCACAAGAAGTATGCCAAGAGCAAGAGTTATTTGCTTGTCCCA GCTCCTTCAGAGTTTTTCCGTCTCGTCTCGTCTTGGAGGCATGCGATTTT CAGAATGAAAGTCGTTGTGTTAAATTGAGACTCAAAAACGGTTGTCTACA CAGACGTGTAGCGCCACAGTGCCGCCGCCAAAGCACGTTGACCTCCGTGC CTTCCTTCCCACCTCTGCTCCTCGTGGCAGGATATCATTTCAACACTGTA ACTAGGTAGGTTCGGATTGGAAATATATTTAACAAACTTGTGACGTGAAA ACGGCCGTTACCCCTACTCCGGTGTCCTGAGGTGAAATATTCACAACAGG AAATAAGCGTTTTTTCATGCCTCGCAAAAGTCTCCCCCCCCCCGTCGCCA ATGGTTTAACGACTACGGCATGCACGACTTTGAGGACCCCGGTCGCCTAG ATAGTATTAGCCTGGGGTGGCGAAAACCCGGCATATCGCTCTGTCCCGGC GGCGAGGTCACTGGTCTAAAACGGCTACGGCACGCCTTTACATGGTACTG ACGATAATCCCCTCCCCGCTTACCCGCGTGTGGATGGTCGTCTTTCCGTA ATTGTCCGAGAAAGGTAGGCAGCTGGCAGGAAGCGATCGCCGGCGGCATG GGGCTTAACCGCCTCTACTTCTGGGGACCAACTCGGTGCGACACGAACGC CTCCTTATCTACACGAATTCGCAGCAGTATTTTTGCTGCTCCGTTCTTTT TTCTCTTCCCGGCACCTTGAATCATTCCTGCTCTCACCAATCCAACAGTA ACGAGAGATGGTTTCGCTGGTGGTTGGTAGCCGGGCCGTCGTTTTCTTTT TTTGTGCTTGCACCTGACTTTCGTGTTGGCTTTGCGTCTCAAGAACAATG CAAAATTTAGCACGTTCTCAATCGATACTTGGAGCTTGTGAGAGCCGGAA AGAATGGGGTTGCGTTAGTGGACAGACAGAACGGTGTTGAACGGGCCATC GATACAATCCGATCCCGGTTAGTGGTTTGTGATCCAAGAATACCCTCCCT TTTCTGATCTCAGCTGGGCTTTAAGGCTGTCTACCTGAACTAGATGTCCA CTTTTATGACATTTATTTTTTGCATGGTTGTCTGCACCTGACCTACATGT ATGACGTAATAGGATTCACCTCGTCAGTCTATCCTATTCGTCTACACACG ACCCCCCTCTCGCGCCTATTCCCGTCTCGAGTACTCTGATACGTGCTGAC GTGTTTGGCCCGGTTTTGTTGTGGATGAGAAGGCGGTGTAGCAAGAGTGA TCGATGCCGCGGCGCGATTTCATTCGGGCCTGCCGGCATTCATTCGTATG GCTTTCTTCACGTGTTGGACGTCGAGATTTTGGACCTACCCCATTGGGAG GTCGAAATTCGTTTGTTTTTTTCTTTTCAGAATCAGCAAAAAACCATTTC TATCCGTAGGAAAGAGCCCAGGAAAATTATCGATGAGTTCGCAGTGTTAT GATATGTCCTTCTTGTTATTTTAACCTTGTTTTGGGCTTATTGCTGCTGC GAAAATCGTTTCCTGGTCTTGAAGAGCCGGGATTGTGGGGTGCTGCACAG AGGATGGATTGGTTTTCAAGGTGGAGGCAACGAGAACAACAAAGCTTTGT TGTTGTGATGTAGCCTCTGCTACAGTCAACATGCCATGCCGATCTGTTTC GATGTGCTCCGTTTGTCAAAGGTTCGTGTTCAATGACACCTGCTCTCTTT CAATCACTGGCATTCGCTCTTTTGCAAGCACTTTGATGTTGAAGATGGAA ACCACCGTCACATCTGATTCACTTATTTATCCCTTTTTTCTGCCCCATCC CCCTCTCGTCACCCCGCTGTAGGGCTGCCGTCGATGCCTTTGAGGAGGAC CTCAAAGAGCATCTCAAGGACCACCCGGCAGAGTTGACGAGAGGGGTACC TGAGATGATAGAAGTCTTGCCACACGGGGCCTCCAAAGCAGTAGGCCTGG AGGCCCTCCTGAAGACGCTAGGCGTTTCCCCTGAAGAGGTGCGTGGAGTG AGCGAGACAGTGAATTGGTGTCGTTTTGGCGTGGGAGTGGGAGGGTGGCG AGGGTGCATGCGGCAAGAGGTAGAGAGAGACACACACAAAGAGATAAGCA GGAGACAAAATGAAAGTGAGACAACCAGAGACAGTCATGAACAAGGACAT GCAGAGACGGAGGCAGAAAGATGGGATGCTAACGATGACTTGAGGCACGT TTCCGTACACTTGTCACAACCGAGGCAATCATTGTGTATGGTGTCGTCCC ACGTACTCCGGAAGTCAGTTTTCTCGACATACGGTTTTGTTTTTTCAAGT TCATGCAAGTAGAGTTGTATTAACAGCACAGCAGCCAGCCGTGGTAGACC TTGGGCAGGCAGGACCGTAACCCCCGTCTCCGGCTCGTGCTGCACCATGC CATACACCAATCAAGAGACCCTGTTGTCGCTCCCTTCTTGTCGCAACTCC GTGACGCAAACACGAACAGGTGATCGCCGTGGGCGACATGGAGAACGACG TGGAGATGCTGCGGAGCGTGGGGCACGGGATCGCGATGGGACAGGCCTCC CTAGAGGTGCGGCGGGCGGCGAGGTTCACTGCCCCCACCAACGAGTTGCA CGGAGTCGCCGTCGCGCTGGAGACGTTCTGTGGCATCTAGTTGCCGCTGC CGCTGCCACTGCCGACCCCCACCTCCCGCTTCGCCATAGGTGATGCGCGG GGTCGCTGGCATCACCTGCGCACGTTCGTAGTATGATAGTACCACAGTTT TTTTAAACCTCGTTGTTGTGTCGTTTTTTTTGTTCTTCTCTCTCCGTGCG CATGATTTATTTTTTATTGACGTCTTTTTTCAGACACTTCTGTACAATTT ACAGCCTTTTTTCCATCGATTGCGCGGAAAAACCGCCTGCCTCGTTGACG ACGAAAGAACTTCGTTTCTTGTGG
back to top

Coding sequence (CDS) from alignment at Scaffold_442:38342..43965-

>EsuBft1004_3a-0001 ID=EsuBft1004_3a-0001|Name=EsuBft1004_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1632bp|location=Sequence derived from alignment at Scaffold_442:38342..43965- (Ectocarpus subulatus male Bft15b)
ATGGCTTCGCGAAGCCGCGGCGACAATGTAGGGGGCAGGATGGTAAGGGC
TCGCAGCAGGGATGGCGGCGGCGGCACCGACGGAGTGTTTCCGGCCGTGG
ACGTGCATCCCCGATGGTGGAGCGAGTCGGATGGGAAAGTCGGGGGCCCA
TGCTCCGTTCGGCGTAGCAGTAGCGTCGGTATTCGCTGTTCCACTCCTCT
CGCTTGTGTGGCTCCCGGCCCAGCGTCTGGAGAATCTTCGGCAGCAGGAG
GACGAGGAGGAGGGGGGGTGTCGGCGTCGTCGTCTTCGCCGTCAGCAAGC
CACCTCTCTCCCTCCCGCGCCAGTTCCACCTGGGCCCTGCCGCGTTCCCC
GTCCCCTCGCCGCTCGCCACCACGAACGCCTCCTTCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAATTGTCCCGACCTCCTCCTCCTCCTCATCGGCC
CTCTCCTCGTCCTATTCCTCGTCTCCGGCATCGCCGGCCGATGGCAGCAA
CAACTTCAGCGGCGGCACCAGCAACGACAACAACAGCAGCAACAACGGCA
TCAGCAGCACCAGCACCAGCAGAGACGACGATGAAGGGTGGCCGGCCCCA
CACCCCTCCCAGGCCTACGTCGCCAAGGCGAGGTGCGGGCAGCGGTACGA
GCACGACGTGGAGACGGGGGGGGCGACACGGATAAGAGCGGTGGTGTCGG
ACCTGGACGGGACTCTGCTGGGGCCGGACAAGCTTGTGTCCGCCACCACT
ATGGAGGCTGTTCGAAAGGCTAGGGCCAAGGGCATCATCTTCGTGCCCGC
GAGCGGCCGCTCCAAGTCGGGCATGATATCCGCCATGGGGGAGTTGGGGC
AGGAGCTTCAGAGAGACGGATCCCCGTTCGTGTGCATGAACGGCCTGACG
GTGTACGGGCAGGGAGACGGCAACGGTGACCTGGGCGAGATCATTCACAG
CGAGCTCATGTGCCTGGAGCTAGCGGCCAGGGTTGTAGCCTTCTGGAAGG
CTCACCCCCTGGCGGAGGCGGCGGGAGTCTCCTTGTGCGGGAGCGAGGGG
GAGACCATTGTCGTAGAGACCCTTGACCCTCGGACTAGCAGAAAAGTTCT
CGGGTTCGAGTTGTTCGGGTTTTGGCCCTGCGACTCTCTCAGAGAAGGCA
GCTGGCAGGAAGCGATCGCCGGCGGCATGGGGCTTAACCGCCTCTACTTC
TGGGGACCAACTCGGGCTGCCGTCGATGCCTTTGAGGAGGACCTCAAAGA
GCATCTCAAGGACCACCCGGCAGAGTTGACGAGAGGGGTACCTGAGATGA
TAGAAGTCTTGCCACACGGGGCCTCCAAAGCAGTAGGCCTGGAGGCCCTC
CTGAAGACGCTAGGCGTTTCCCCTGAAGAGGTGCGTGGAGTGAGCGAGAC
AGTGAATTGGTGTCGTTTTGGCGTGGGAGTGGGAGGGTGGCGAGGGTGCA
TGCGGCAAGAGGTGATCGCCGTGGGCGACATGGAGAACGACGTGGAGATG
CTGCGGAGCGTGGGGCACGGGATCGCGATGGGACAGGCCTCCCTAGAGGT
GCGGCGGGCGGCGAGGTTCACTGCCCCCACCAACGAGTTGCACGGAGTCG
CCGTCGCGCTGGAGACGTTCTGTGGCATCTAG
back to top