EsuBft1004_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1004_2a-0001
Unique NameEsuBft1004_2a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_442contigScaffold_442:59162..64694 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LI02
ProteomeIdEsuBft1004_2
Protein domainsIPR023302
Protein domainsPTHR11757
Protein domainsSSF50993
Protein domainsIPR002470
Ownerapollo_admin@sb-roscoff.fr
Noteprolyl endopeptidase os:mus musculus gn:prep pe:2 sv:1 [Automatic annotation]
Nb exon9
Max annot lvl2759|Eukaryota
Length909
Hectar predicted targeting categoryother localisation
Evalue5.47e-202
EggNOG OGsCOG1505@1|root,KOG2237@2759|Eukaryota
Date last modified2016-06-13
Date creation2016-06-13
Preferred namePREP
KEGG koko:K01322
KEGG Pathwayko04614,map04614
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009966,GO:0010646,GO:0016787,GO:0016788,GO:0017171,GO:0019538,GO:0023051,GO:0033218,GO:0042277,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0052689,GO:0065007,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564
EC3.4.21.26
Descriptionserine-type exopeptidase activity
COG categoryE
BRITEko00000,ko00001,ko01000,ko01002
Cross References
External references for this mRNA
DatabaseAccession
GO0005515
GO0070008
GO0005739
GO0005829
GO0004252
GO0006508
GO0042277
GO0003333
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1004_2aEsuBft1004_2aEctocarpus subulatus male Bft15bgeneScaffold_442 59162..64694 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1004_2a-0001EsuBft1004_2Ectocarpus subulatus male Bft15bpolypeptideScaffold_442 59162..64694 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1004_2a-0001-exonagat-exon-32103Ectocarpus subulatus male Bft15bexonScaffold_442 59162..59191 +
EsuBft1004_2a-0001-exonagat-exon-32098Ectocarpus subulatus male Bft15bexonScaffold_442 59263..59422 +
EsuBft1004_2a-0001-exonagat-exon-32101Ectocarpus subulatus male Bft15bexonScaffold_442 60197..60243 +
EsuBft1004_2a-0001-exonagat-exon-32102Ectocarpus subulatus male Bft15bexonScaffold_442 60766..60834 +
EsuBft1004_2a-0001-exonagat-exon-32100Ectocarpus subulatus male Bft15bexonScaffold_442 61179..61292 +
EsuBft1004_2a-0001-exonEsuBft1004_2a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_442 61608..61747 +
EsuBft1004_2a-0001-exonagat-exon-32097Ectocarpus subulatus male Bft15bexonScaffold_442 62610..62751 +
EsuBft1004_2a-0001-exonagat-exon-32104Ectocarpus subulatus male Bft15bexonScaffold_442 63593..63685 +
EsuBft1004_2a-0001-exonagat-exon-32099Ectocarpus subulatus male Bft15bexonScaffold_442 64581..64694 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1004_2a-0001-cdsEsuBft1004_2a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_442 59162..59191 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1004_2a-0001 ID=EsuBft1004_2a-0001|Name=EsuBft1004_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=909bp|location=Sequence derived from alignment at Scaffold_442:59162..64694+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATACAACCCCCCCCAACAAATGCGAGGCCGGGGGAACCGCGTTGGT
GGGAGGTCTCCTTCTCGCTCGGTCGATCCACAATAGCCGCGCCAGGAAGA
AGGTGCTGCAGATACCGTCGGCGCGGCGATCCGACCACACCGACGAATAC
TTCGGTCACGTCGTGCGGGATCCCTACAGATGGTTGGAACAGGAAGACAG
CAAGGAGACCAAAGCTTGGGTAGAAGAACAAACCAAGCACACGGATGCGT
ACCTCCAAACGGAACTAGAACCGGGTCGAGGAAAGTTCCTGGCTAGGCTC
GAAGAGGTTTTCAACTACGACAAGCACAGTTCCCCCTGGAGGGTGGGCGA
ATACTGGTTCTCCTACCTGCAGAAGGGCCTCAGCCCTCAGGCGGTCATGT
ACAAGCAGGTGCGGATTGTGGTTGGGCTGGATGGCACGCCGGAAGTGCTT
CTGGACCCGAACACGCTGAGTAAGGACGGCACTAGCGCTCTATCGGGGGT
GGACTTCTCCAAGGACGGGGACAAGTTGGCTTACGGCATCAGCAAGAAGG
GTTCTGATTGGTTTTCCATTCACGTGAAGGACGTGGTTACAGGCAAGGAC
CTCCCCGATGTCGTGGATTGGTGCAAGTTCGGAGGCATCACGTGGGAGGA
GGGGGCACGGGGATTCTTCTACTCGGCGTTTCCCCGACCGAAGTCGTTGG
AGGCCGCTGGCAAGAGCGCCGGCACCGAAGTAGAAGTCGCCACCGGGCAC
CGCATCATGTACCACAAGCTAGGCACCAAGAGCTCAGAAGATCAGCTGGT
GTACCAGTCTCCCCTGGACGAGAAGTGGCTCGCCTCCAGCATCATGTCCG
ACGACTGGAAGACCCTCATCATCAGCATCGGAGACAGCTGCGACCCGGTC
AACAGGTAG
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protein sequence of EsuBft1004_2a-0001

>EsuBft1004_2 ID=EsuBft1004_2|Name=EsuBft1004_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=302bp
MNTTPPNKCEAGGTALVGGLLLARSIHNSRARKKVLQIPSARRSDHTDEY
FGHVVRDPYRWLEQEDSKETKAWVEEQTKHTDAYLQTELEPGRGKFLARL
EEVFNYDKHSSPWRVGEYWFSYLQKGLSPQAVMYKQVRIVVGLDGTPEVL
LDPNTLSKDGTSALSGVDFSKDGDKLAYGISKKGSDWFSIHVKDVVTGKD
LPDVVDWCKFGGITWEEGARGFFYSAFPRPKSLEAAGKSAGTEVEVATGH
RIMYHKLGTKSSEDQLVYQSPLDEKWLASSIMSDDWKTLIISIGDSCDPV
NR
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mRNA from alignment at Scaffold_442:59162..64694+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1004_2a-0001 ID=EsuBft1004_2a-0001|Name=EsuBft1004_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5533bp|location=Sequence derived from alignment at Scaffold_442:59162..64694+ (Ectocarpus subulatus male Bft15b)
ATGAATACAACCCCCCCCAACAAATGCGAGGTCAATGGTCTAACGACTAC
GGCATGCACGACTATGAGTACACCCCCCCCCCCAACAAAAACGTTTTGCA
GGCCGGGGGAACCGCGTTGGTGGGAGGTCTCCTTCTCGCTCGGTCGATCC
ACAATAGCCGCGCCAGGAAGAAGGTGCTGCAGATACCGTCGGCGCGGCGA
TCCGACCACACCGACGAATACTTCGGTCACGTCGTGCGGGATCCCTACAG
ATGGTTGGAACGTGAGGATGATGGCTTGACTTAACCCCCCCTCCCGGTAG
GATGGGGAAAAAGCGTTCTTGAGCCACCTTTGGCAAAAGTAGGAAGGCAT
CGGGTGATCGGTCCTGTGGGAACACCGGTCCGTCCTCTCGAGGACGCGTG
GCCAACGGTCTTACAATCAAGGCACGGAAACATGCGAGTACGCCCACCCC
CGGATGTCGTGTGGAGGACCAGCGGGGCCTCGCCCCGCGGAGCGTTTTGT
TCGTCGTGATGTCGAAGGGTGCCAGCAGTGCTGCCCGGGAGTGCTCGGGG
CCAACCGATGGGATCCAAGTTTTTTTTGCCACCACTTCTGATCCCAAGTT
GTCTGGGGCTGGGGGAGGAGCTAGCGTGCGGGCTGTAGTTGTCTGGTTTG
GTTGTTTGTGTGCGGCAAAGAATGAACGTTTTGTCGTCCTGCCTCCCTGC
TTGTCGTCGTCTCCTTTCTCCGTTGAGCTTTCCCACTCGCTTGAACACGT
TCGTATGAGTGCATGTTGGTGGTGTTGCCGTTCCTAATCCCGTCCCTTCA
TGTACGTTCTGAAAGCAGCATGCTGTTGCCACTGCTCCAAAAGGTGGTGG
TTTTTCTCCGTTTGTCGTGGCTGCTATTTCAGACGAACGCGTGACCTGCG
TTGTTGTATGAGACCCAATTCTGTCTGCAGTGTAACCCCAACCATGTGTT
GCGGTTTTAATATTTTCCGCCGTTCGCTTGCGACGGTTTTGATGATTGTT
GGCGTGTGCCTGCTTTTTTTCTCCCGCTGCCGCAGAGGAAGACAGCAAGG
AGACCAAAGCTTGGGTAGAAGAACAAACCAAGGTAACCCCCCGGCACAGA
GCTGTATGCAACCGTACATGTAGCACCACCGTACCACATCGCGTACCGTA
CAGCACCTTTTTTTCGTGCCGTGCCTTACCGTGCACTGTCGCCGGATTTC
GGCACCATCAAGAATCGGTCCCGGCGGATGTAGGGTTGTGGGAAGGGATG
GAAGGCATGCGTGGGTGGAAGAGGGGCACAACGAAGGGAGCTTGTGCGCA
GGTCTCGAATTGGAGCGTGGTACCGCTGGCTCAAAATGCTCTCCTTTTGC
AGTTAGATGGATTGACTTTTGTGCGATGCCGTCCTTCCCACGGCAGCACA
CAAAGTGAGAGTTGTTTTGTCGAGGTCCGAGTTTCCGCGAGGTCTCGACT
AAATGTACGTCGGTACTCGTCCCTTCTGGATGTGGCTAATCCACGCCATG
CCCTTCTCCCCTGCCGTGCACGCGTCCGCTGTGTGTTTGACTGCTCTTGG
TGTCGGTGGTACTTACTGGATGGGGGGGGGGCATGATGCCGCGTGCACTC
GCAGCACACGGATGCGTACCTCCAAACGGAACTAGAACCGGGTCGAGGAA
AGTTCCTGGCTAGGCTCGAAGAGGTAGGTACGGTCGGTGGGTCACGTTGA
CGGACGAGCGGGCGGCGGCAGCAGCAGCAGCGCATTGTAGCCCACCTCGA
TGTCAATGTAGGACTCGCTGTCTTTTCTCTTCTCTCTCTCTCTCAATGTA
ATCTGTGTCTCTTTACCTCCCGCTCTCTCTTTGTGTCTAGCTGTCCTCTC
CGCCGCCGTTCTTGTAAGATTGAAACCTCCAGCAGCCTCCTTGTCGACAT
TCAACATTATCAAACAGCTGGTGCGACCCATGAGCTGGCTGGCCTCTCGT
CCATCGATTGTTCGATGCGTTAATATTATAATTAATACCGCCTTCCGTTC
TCGTCTGTATGTGTCAGGTTTTCAACTACGACAAGCACAGTTCCCCCTGG
AGGGTGGGCGAATACTGGTTCTCCTACCTGCAGAAGGGCCTCAGCCCTCA
GGCGGTCATGTACAAGCAGGTGCGGATTGTGGTAGCTATTTCCTTTTTTT
TCTCGTCGTTTGTTAGTGTTGCCGTGGTAGGTGTTCCTGTCGGTGGTGTC
GCTTCAAAGTGGTCGTATATCGACTCAATGGTTGTGTGCATCTTCGGTGT
TGACCTCATTTTTTCTGTGTGTTTGTTTGGCACCTTTTCGAGTCCAAGTC
TAGTAATATTATGTTTGAGCTTGTTTGTGTCGTTTCTCTTGTTTCTACAT
GAAAGCCTGGGCTGGATGGCACACGTTTCTCAGCGGGTAAATATAGAAGA
CAACTGCTTTCACCACAGCTCATTTATTTCTTTTTCTGCAACAAAGGTTG
GGCTGGATGGCACGCCGGAAGTGCTTCTGGACCCGAACACGCTGAGTAAG
GACGGCACTAGCGCTCTATCGGGGGTGGACTTCTCCAAGGACGGGGACAA
GTTGGCTTACGGCATCAGCAAGAAGGGTTCTGATTGGTGGGTTCCAACGC
CGAGGCCGCTCGCTGATTGGCTGGCTGACGGTCGTGCAATCTTGTGATTG
CAGAGGCAACGGTTGCTTTTGCGACACGTTTGGCTACGTCGCTGCTGTGC
AACTAAGCGTCCGTGTGTCCTGGTGACGTTGGTGGCGCGGTTCCGTAATC
CGGTACGGTTTTTTCTTCCGAGGACAAACCAGATGAATCATAGTCCATTA
ATTCCCAAGTATAATATTAGCCTTTTTTAAGGCTTTAACTATACGGTCTG
ATAATTTTAAGCAATCTAAAGAACCGCCATCCATCTCATTAACTCTTTTT
AACAATAATTCTTCAGATGTCGGTTCTCGACGAAGCACGGGTGCCACGGT
AGCCGAGGGCGGCAAAACAACAAGCGTTCACGCACGAACGATTTTGTCTT
TTTCCATCGATGCGTTGGGCGGTCTTCTTTCTTGAATGATTTTATTTAAT
TTTTCTTGCTTGAAGTCGGAAAGTTGTTCTTTCACACGTGTGTTCGGCCG
TGTTCTTTTTTCGTGAACATACAGCAGGTGGCCCGATATAGGGCAACTTG
ATCGGTGGAACTGCCGACATAATGGCATCAACATCTCTTGTCACACTCTC
AACATGAAAGATACATGAACCCGATATGTCGAATGGTGGCACTGCCCTGA
ATAGTGGCATATTCTCCTCTTGCCCCTACATGCGAATATGTCGGGCCACC
TACTGAACATTTTCCGTTTTTTTTGGCGGCAAAACAACAAGCGTTTACCC
GCGTACGATATTGCCTTTTTGCCATCCATTTCTTTGGCGGTCTTCTTTCC
CGTGAATGTGTTTTTCGTATTTTTTTCGTGTTTTTTTTTCTTCGGAAGGT
TTTCCATTCACGTGAAGGACGTGGTTACAGGCAAGGACCTCCCCGATGTC
GTGGATTGGTGCAAGTTCGGAGGCATCACGTGGGAGGAGGGGGCACGGGG
ATTCTTCTACTCGGCGTTTCCCCGACCGAAGTCGTTGGAGGTGCGTGGTG
GTTAGGATCCAGGGTGCTCCCGGCATCCCTCGCCCTCGTTGTGCGGCGAT
TGATGACACGTGATCCCGGGGTCAAGCAGTCGCTTCGCCTGCGAAAGGCA
GCGACAACACTCGGGCTCTCAATTTCTATGCACGCCGTTTGGACGGTTTT
CGCATGGGAAAGCTTTGCTGATATGTGCTCGCAGATGCCTTTCTTGCTTG
AGCATTTTGTCACCGAGTTTTCGCGTTGTGTATCAGGAGTACCGCAATGA
GGTTGTTGTCGGGACTGGCTGCAAAGGTGGCGTCGTGACCACCGTGTACC
CCGAGGCAAAAGAAACAACTCTGTTCTGTTCGGAAATATATGAGCTATTC
AATTACTAGTGTGATGTCCCAATGGCACCAATGTCTCCGAACAGAGGAGG
CATAACGGTTGCATGGTTGTTTGCCCCACAGCCCGTCGTGTCCCCCGGCC
TTTCCTCTGTGCCGGGAAGACGCAGTCAACCTCACACGTCTCGCGCCCTC
CCCACCTCCCTCCCGCTTTTTTTTTTTTTTTTTTTCCCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTT
TTTTTTTTCCCCTGTGTGTTGATCTGCGAAGGCCGCTGGCAAGAGCGCCG
GCACCGAAGTAGAAGTCGCCACCGGGCACCGCATCATGTACCACAAGCTA
GGCACCAAGAGCTCAGAAGATCAGGTACAATTTGGGGGGCAATGGCCATG
ACACGGGGACACACGACACACACTCGGGGGGTTAGACAGCCGCCACCCTC
GCCACTGTCGTATGCCGTTGTTGCACCCTGGCGTTGTCGGCGCCTTGCAT
GGGTATGCACAGCTACCGGAGAACGCCATGTCCTTTGAACTAGTTTTTCT
ACTTGCTTTTTTGGCGAAGTATTCACAAACTACGATTGTTGTGTGTGTGT
GTGTTTCTATGTCGTTGTGGTAGCTTTTTTTTTTCTCGCTTGTTTTGCAT
TACCTAGTGGCTCGGTGTGTTGCCTTCAGTCGCCATTTGATCTTTTCAGC
GTCCGCCGTGTGTATTTTATCTTATACCCCATCAATGTATTTCATTGCAT
TGTATGATAAGAAATGGGCATGTCCCGCCTCTAGGCTGCGCGGCTCCGTG
AATCACTTTGATGAAGGCATCCATGGCGGATCTACGGCGAGCGTTGTGTC
GTTTCTCTTTGTTTTTGTTCGTCTCGCGTGTTCGCCTTTCCCACCGGCAC
GTGGGGGGGATCTCCGAAAAGGGTCCCATCTCCCGCACGTCTGTCTAGGA
CGATCCCATCTCCATTGGCCGACAAGCTTCATTTGGTTGTTGTTGGCTAT
CGTGCGTACCTTCACCGTACACGTTTCTCCATTTTGTCATGCTCTCGTTC
CGCTTGTGTGTTGTTGGTCTCCACCACCCACGTGCGGAGGCGATCTTTGA
AACGGGTCCCATCTCCCCTCTCCCTCTGCCCACAACCTATCACATCGTTG
ATTGATTGGTCGATGGGTTGGTGACTCTATTATACAACTACTGGTCGTCG
GTGTGCCTCCCACCTCCTTTTCTTGTGTGTGTGTGTGTGTGTGTTTTTTT
TTTGTGTGTGTGTTGGCAGCTGGTGTACCAGTCTCCCCTGGACGAGAAGT
GGCTCGCCTCCAGCATCATGTCCGACGACTGGAAGACCCTCATCATCAGC
ATCGGAGACAGCTGCGACCCGGTCAACAGGTAG
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Coding sequence (CDS) from alignment at Scaffold_442:59162..64694+

>EsuBft1004_2a-0001 ID=EsuBft1004_2a-0001|Name=EsuBft1004_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=909bp|location=Sequence derived from alignment at Scaffold_442:59162..64694+ (Ectocarpus subulatus male Bft15b)
ATGAATACAACCCCCCCCAACAAATGCGAGGCCGGGGGAACCGCGTTGGT
GGGAGGTCTCCTTCTCGCTCGGTCGATCCACAATAGCCGCGCCAGGAAGA
AGGTGCTGCAGATACCGTCGGCGCGGCGATCCGACCACACCGACGAATAC
TTCGGTCACGTCGTGCGGGATCCCTACAGATGGTTGGAACAGGAAGACAG
CAAGGAGACCAAAGCTTGGGTAGAAGAACAAACCAAGCACACGGATGCGT
ACCTCCAAACGGAACTAGAACCGGGTCGAGGAAAGTTCCTGGCTAGGCTC
GAAGAGGTTTTCAACTACGACAAGCACAGTTCCCCCTGGAGGGTGGGCGA
ATACTGGTTCTCCTACCTGCAGAAGGGCCTCAGCCCTCAGGCGGTCATGT
ACAAGCAGGTGCGGATTGTGGTTGGGCTGGATGGCACGCCGGAAGTGCTT
CTGGACCCGAACACGCTGAGTAAGGACGGCACTAGCGCTCTATCGGGGGT
GGACTTCTCCAAGGACGGGGACAAGTTGGCTTACGGCATCAGCAAGAAGG
GTTCTGATTGGTTTTCCATTCACGTGAAGGACGTGGTTACAGGCAAGGAC
CTCCCCGATGTCGTGGATTGGTGCAAGTTCGGAGGCATCACGTGGGAGGA
GGGGGCACGGGGATTCTTCTACTCGGCGTTTCCCCGACCGAAGTCGTTGG
AGGCCGCTGGCAAGAGCGCCGGCACCGAAGTAGAAGTCGCCACCGGGCAC
CGCATCATGTACCACAAGCTAGGCACCAAGAGCTCAGAAGATCAGCTGGT
GTACCAGTCTCCCCTGGACGAGAAGTGGCTCGCCTCCAGCATCATGTCCG
ACGACTGGAAGACCCTCATCATCAGCATCGGAGACAGCTGCGACCCGGTC
AACAGGTAG
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