Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1001_5 |
| Protein domains | PTHR32134 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | calmodulin-binding protein os:dictyostelium discoideum gn:cmbb pe:1 sv:1 [Automatic annotation] |
| Nb exon | 1 |
| Length | 609 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1001_5a-0001 ID=EsuBft1001_5a-0001|Name=EsuBft1001_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=609bp|location=Sequence derived from alignment at Scaffold_30:78496..79104- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCGGAGTGGTGTGGCCGGCCACGCTTGGGGAGATGTTGTTCGGAGG
CGGCTGCGAGAGCCGATTCAACCAGTCACTCGAAGGTATCAGTTGGCCTC
CTGGTTTAAGAAAGCTTTCCGTAGACAGCATTTTCGACAACTCCATTCAA
GGTGTCATCTTCGGAGATTCCATCGAGGAAATTCGTCTAGGAGGACAGTT
CAACCAGCCAATCGCTGCAGTACGGTGGCCCGTGGTTATCCAGCCGTTGA
CCGGCTGTCATTGGCCGGAGGCGTTGATCGCTCTGACGACCGGTGATGCG
TTCGCCCAGAGCCTGCAAGGCGTTATTTGGCCTGTGTCGCTTCAGAATCT
CACGTTCGGGTGTGCGTGGAACGGGGAACTGGGGGGTGCGGTACTCCCTG
ACACGCTCAAGGTTCTACGGTTGGGGGGGACTTTTGAAAGCCCAATAGCC
GGCATTAAGTTGCCTGAGGGCCTGCAGGAGGTGTCGTTCGCCTTGCACTT
CCAGGAGGTTGATGATGTTCGTTGGCCCAGGAACGTCCGTAGAGTGGTGC
TCCAGGATCACTTGAACAAAATTATTTGGCCGAACGCGCTACGTGGCCGT
TCACGCTAG back to topprotein sequence of EsuBft1001_5a-0001 >EsuBft1001_5 ID=EsuBft1001_5|Name=EsuBft1001_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=202bp
MGGVVWPATLGEMLFGGGCESRFNQSLEGISWPPGLRKLSVDSIFDNSIQ
GVIFGDSIEEIRLGGQFNQPIAAVRWPVVIQPLTGCHWPEALIALTTGDA
FAQSLQGVIWPVSLQNLTFGCAWNGELGGAVLPDTLKVLRLGGTFESPIA
GIKLPEGLQEVSFALHFQEVDDVRWPRNVRRVVLQDHLNKIIWPNALRGR
SR back to topmRNA from alignment at Scaffold_30:78496..79104- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1001_5a-0001 ID=EsuBft1001_5a-0001|Name=EsuBft1001_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=609bp|location=Sequence derived from alignment at Scaffold_30:78496..79104- (Ectocarpus subulatus male Bft15b)
ATGGGCGGAGTGGTGTGGCCGGCCACGCTTGGGGAGATGTTGTTCGGAGG
CGGCTGCGAGAGCCGATTCAACCAGTCACTCGAAGGTATCAGTTGGCCTC
CTGGTTTAAGAAAGCTTTCCGTAGACAGCATTTTCGACAACTCCATTCAA
GGTGTCATCTTCGGAGATTCCATCGAGGAAATTCGTCTAGGAGGACAGTT
CAACCAGCCAATCGCTGCAGTACGGTGGCCCGTGGTTATCCAGCCGTTGA
CCGGCTGTCATTGGCCGGAGGCGTTGATCGCTCTGACGACCGGTGATGCG
TTCGCCCAGAGCCTGCAAGGCGTTATTTGGCCTGTGTCGCTTCAGAATCT
CACGTTCGGGTGTGCGTGGAACGGGGAACTGGGGGGTGCGGTACTCCCTG
ACACGCTCAAGGTTCTACGGTTGGGGGGGACTTTTGAAAGCCCAATAGCC
GGCATTAAGTTGCCTGAGGGCCTGCAGGAGGTGTCGTTCGCCTTGCACTT
CCAGGAGGTTGATGATGTTCGTTGGCCCAGGAACGTCCGTAGAGTGGTGC
TCCAGGATCACTTGAACAAAATTATTTGGCCGAACGCGCTACGTGGCCGT
TCACGCTAG back to topCoding sequence (CDS) from alignment at Scaffold_30:78496..79104- >EsuBft1001_5a-0001 ID=EsuBft1001_5a-0001|Name=EsuBft1001_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=609bp|location=Sequence derived from alignment at Scaffold_30:78496..79104- (Ectocarpus subulatus male Bft15b)
ATGGGCGGAGTGGTGTGGCCGGCCACGCTTGGGGAGATGTTGTTCGGAGG
CGGCTGCGAGAGCCGATTCAACCAGTCACTCGAAGGTATCAGTTGGCCTC
CTGGTTTAAGAAAGCTTTCCGTAGACAGCATTTTCGACAACTCCATTCAA
GGTGTCATCTTCGGAGATTCCATCGAGGAAATTCGTCTAGGAGGACAGTT
CAACCAGCCAATCGCTGCAGTACGGTGGCCCGTGGTTATCCAGCCGTTGA
CCGGCTGTCATTGGCCGGAGGCGTTGATCGCTCTGACGACCGGTGATGCG
TTCGCCCAGAGCCTGCAAGGCGTTATTTGGCCTGTGTCGCTTCAGAATCT
CACGTTCGGGTGTGCGTGGAACGGGGAACTGGGGGGTGCGGTACTCCCTG
ACACGCTCAAGGTTCTACGGTTGGGGGGGACTTTTGAAAGCCCAATAGCC
GGCATTAAGTTGCCTGAGGGCCTGCAGGAGGTGTCGTTCGCCTTGCACTT
CCAGGAGGTTGATGATGTTCGTTGGCCCAGGAACGTCCGTAGAGTGGTGC
TCCAGGATCACTTGAACAAAATTATTTGGCCGAACGCGCTACGTGGCCGT
TCACGCTAG back to top
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