EsuBft1000_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1000_6a-0001 ID=EsuBft1000_6a-0001|Name=EsuBft1000_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2079bp|location=Sequence derived from alignment at Scaffold_647:14705..21389- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CTCCTGTCTCGTAGCTCCTCACCTCTCCGTTCCTTGCGGGTTAGCTTTTC
CCAACAGCAGCAGCAACACGCACCACCGCTGTTGTTGCCCACCCGCTCGA
GGCGACACTTTAGTTATATCGGGAGGCATCGCTGCAACACGTCTTCCACC
AAACCAGCGTGCTGCATTGCCAGGCGGACACCCTTTTTTGACCCGCGCAA
CTTGAAGGCCTCCCTCCTGCTTGCGAAGAACCGCCGCATCAGCAGCATGA
GGCGCAAGGAGCAAGTCCGCGTGGCGTTCCTCTTAGCCTTCGCGGCTTCG
CCAGCAGCTGCATTCGGCTTCTCAGTCTTCAACCCTGCATCTCACAGGGT
TACACCCGCAGCCGTGAGACGTGGCGGTGGTATCTGGGGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCACTAGCCGTTGCGGCTGGCAGCAGCAGCGGCGG
CGCTTGGGGATGATGAGCTTCGAGGCAGGGGACTTCCCGAGCGACGTGGG
GGACGCCGCGGGGTCGTCTGCGGTGCCGGCGGTGCTGGCCGACGACAACC
CCGAGCTCAGAGAGACCATGAAACGCGAGGTTCTGTCCATCGCCGCCACT
TCCAACAGAGGCCAAGTAGCCACGCAGGAAGAAAAGGATGCGGCAATGGA
CCTGATTTTTCAGCTTGAGTCCCTGAACCCGACTCCGGATGCCACGAATG
TCAACACCATCGGAGGGGCGTGGGAGCTGGTGTACACGGACACGCAACCA
TTCCGTTGTTCCCCCTTTTTCATGGCCCTGGGGGAGGTGTTCGGCGAAGA
AAAGGGCCAAGCGGAGACTTTGTTCTCGCTGCACCGAGCCGCAACTTCAA
ACGGGGAGATCGGCAGGGTCAGGCAGACCATCAGCGAGTCTATGCTGGTG
TCGGAGATTGATCTCAAGGTGGGGCTGCTTCCGGGCTTGCCGATGGCCCT
CAAGGGCACCGTCGTCACGAAGGCACGGCTTAACCCCGTCAGCTCCGATT
CTTTCACTGTCGTGGTCGAGAGCACGTCTGTGACCAACAACAACATACTG
TCGTTCTTGGACGGTGCCGTTGAAGTGCCCGTCGAGCAGGTGTACAGCAC
CCTCAGAGGCAGCGTTCCGGAGGCGAAGCTGTCCACGTACTACCTCGACG
ATGACATGCGAATCAGCCGAATGTCCGACGATCATGTTTTCGTGTTCGTT
CGGGCCCCGTAAGCATGTATCGGCAGAGGCTTGTGTACGAATCCGAAAAA
GCGGACGTCTTCATCTCGCCTGATTTTGTTCATTTTTTGTCATTTTGTTC
TGTTCCTCTCTTTGTGGTTAATTTGTGGAAATCTGTTAGTGAGGGAGAGG
AGGCACGCACTTGTATTAATGATATTGCTTTCGAGTTTTGACGGTGTTTG
CCAGCGTTTGTTTGGAAGTAACGGCTTGCCAAGCGGCATGTCGGGTTCGT
GCGGAGCATGTCCAAAATGGTGTGTCGGGGAGGGAGGAGGGGTTAGACTA
GAGAGGGGTAGAGCGAGGAAATCCTGTGGAGTAGGCTCTAGAGGACATAT
TGAGAGAGAGTAGCACGTGGTGACCCTTGGGCGTCTTGAATTAAGCGTTT
GAGTTGAAACCGCCAAGACGGGAAAAGCCCGCGGAATTTTGATAATTATG
GCTTGTGGCATGGATATCTTGTGGAAAGGGGAAGCTGTAGCATGGACAGT
CAGAGAACGAATTGGGCTAGTTTTAGGGTCGATCACCCGCGCTACCCATT
TGGTGGCTTTTCAGATAAACCATCCAGCCTATTCGCCTCAACCGACCCGT
CGGACCTACACATGTGTGTAGCTGTTGAACTTGTGTTGAATCGCGGGAAC
GATCACGGAGGACAAAATGTGCGCGATGGGTCGGGCACCGGGAAAGTGGC
GCGGGGTGATGAAATCGGTCGGCTGTCAACACATACATGTTTCGGTCCCT
GTGGTGTTGGCAAAGTAGTGTGTAGCCTCCCATTATTGTTTTTGCTTATT
ATCCCCTGCGATAAATAGTGGACGGAAGAACTTCCACAGACTGTAGTTGT
ACTATCGGTGGCCGCCGTGTCGCCGTGCT
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protein sequence of EsuBft1000_6a-0001

>EsuBft1000_6 ID=EsuBft1000_6|Name=EsuBft1000_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=250bp
MMSFEAGDFPSDVGDAAGSSAVPAVLADDNPELRETMKREVLSIAATSNR
GQVATQEEKDAAMDLIFQLESLNPTPDATNVNTIGGAWELVYTDTQPFRC
SPFFMALGEVFGEEKGQAETLFSLHRAATSNGEIGRVRQTISESMLVSEI
DLKVGLLPGLPMALKGTVVTKARLNPVSSDSFTVVVESTSVTNNNILSFL
DGAVEVPVEQVYSTLRGSVPEAKLSTYYLDDDMRISRMSDDHVFVFVRAP
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mRNA from alignment at Scaffold_647:14705..21389-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1000_6a-0001 ID=EsuBft1000_6a-0001|Name=EsuBft1000_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6685bp|location=Sequence derived from alignment at Scaffold_647:14705..21389- (Ectocarpus subulatus male Bft15b)
CTCCTGTCTCGTAGCTCCTCACCTCTCCGTTCCTTGCGGGTTAGCTTTTC
CCAACAGCAGCAGCAACACGCACCACCGCTGTTGTTGCCCACCCGCTCGA
GGCGACACTTTAGTTATATCGGGAGGCATCGCTGCAACACGTCTTCCACC
AAACCAGCGTGCTGCATTGCCAGGCGGACACCCTTTTTTGACCCGCGCAA
CTTGAAGGCCTCCCTCCTGCTTGCGAAGAACCGCCGCATCAGCAGCATGA
GGCGCAAGGAGCAAGTCCGCGTGGCGTTCCTCTTAGCCTTCGCGGCTTCG
CCAGCAGCTGCATTCGGCTTCTCAGTCTTCAACCCTGCATCTCACAGGGT
TACACCCGCAGCCGTGAGACGTGGCGGTGGTATCTGGGGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCACTAGCCGTTGCGGCTGGCAGCAGCAGCGGCGG
CGCTTGGGGATGATGAGCTTCGAGGCAGGGGACTTCCCGAGCGACGTGGG
GGACGCCGCGGGGTCGTCTGCGGTGCCGGCGGTGCTGGCCGACGACAACC
CCGAGCTCAGAGAGACCATGAAACGCGAGGTTCTGTCCATCGCCGCCACT
TCCAACAGGTGATTTGTTCGAAACATGTGTTGCTAACCACTGCTGTAGAG
GTGAAGCGTGTATCTACAAAAATACACCAGGCGTGTGATGTCAGACCCGG
TGGCAGCTGGTCCGGTATTAACGCACGTGCAAAGTGCAAATGGTGTGTAA
TCAATGCGTGCGAGACGCCCGCGGGAGAGAGCCACCGTTCCTGTCCTGTA
CTGCCGTAGAAGGGGCATAGCCCGTGGTGTCATCGTATGTATCAGTACGG
AGCAATAGATCATGCTCTTGGTGGATTGACTAATGTTGACAGATAAGTCG
TGCATGGGTTACTTGCTCGGTGGTTTTGTTCTTCTTCGATCGAGGACGCG
AGACGTGAGCGCACCTCTCCCCGTCACGGCGGCGGTAGCAGTGAGTGCCA
TGTGCGAGGTCAAAGTACGGCTGTGCCAATCTTCATTCACGTCACGTGAA
GGCTACTTGTTTTCAAGCATACCTTTTTCTGAATTCGGCAGAGCATGTGA
GCAAGGGTCGTCGTTTGCTACGCCCCACCAAGTGCCAATTGTAGCATTGT
GCATGCGCATGACTTTTGGACGAAAGATGAGCCATGAGAAGTAGTGGCAG
CATCTTTCCCGACGTACCGAAGAAGAGTCGCTGGTTTCTGTCAAACAGGG
AGGGAAACATGAAGCCAGGTCGCCATCCCACCCTCGGTATTTTGTGTGGT
GGAGCCCGTAGCGCCTCCAGCCAGAAGACCACGAGAGGTACTGTACAGTA
GCCATTCTACACAGCAGCGGCTTTGTAATTTTTTGTAGTCTCCACTGGTG
TATGGTCGTTCTCGTGCCTGTAACAACCCTCGGCATGTCTCGAGGTTTTG
ACACCGCTGCTCTCTTCCCTTCTTGTTTTCTCTCTCCCTCTCTCTCACGT
GTATGTATTCGTACCCGATATTTCTCCCCTTCCCCAGAGGCCAAGTAGCC
ACGCAGGAAGAAAAGGATGCGGCAATGGACCTGATTTTTCAGCTTGAGTC
CCTGAACCCGACTCCGGATGCCACGAATGTCAACACCATCGGTGAGCTGC
AGGCCTTCTTCCCGTTTCTTTTTGTGTCTCGTGAGAGGAGGGATGAATAG
TTTTTTTCGGACCGCCGTTTCAGGCTCGTTGTACACCTGAGGTTTGCTGT
CTACCGCCCTAACGGCACCTCTTTCTTCATGTCTGCTTCATTCTCTCTCC
CACCTGATGGAAACTCTCGTAGTGTCTCTGCGGTTGAAACTCTAAATAGT
TTTTTCAACACGATTTTCCCGTACTTCGACAGACTGTCTACCATGTTCAC
AGACTGCCCTGCTCACAGGGACTGCGAACATAAACCCCTCTCTATCATAC
CGCCCAGGCCCACGCCCGGAGGAGAAATGCTCGCCCATCACTTTTTCAGA
ACAGAGGTAATAGTCAGCACGATGCCTTTGCCTTGTTGCTGGTCGGTTGC
CTCCGCATCGCAAGAAGCCGAAAACGATAACACACTAGCCTTCAATCCGT
ATTGCAGAAACGAAGGCGGATTGACTCCTGCAGGTATCCCCAGCGTTCAT
ATCTATACAGCAACGCACGTCGCACTCTGTCGCGACTTGGTTATCCTTTC
CGCGTGGACGCCAATGTACTATTTGCGCTCAAACTTTGTTCGGTCTCCCC
CCCCCCTCCCTGACTCTCTTTGCCGGCGACACGGGCGGGGGGGGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTAGGAGGGGC
GTGGGAGCTGGTGTACACGGACACGCAACCATTCCGTTGTTCCCCCTTTT
TCATGGCCCTGGGGGAGGTGTTCGGCGAAGAAAAGGGCCAAGCGGAGACT
TTGTTCTCGCTGCACCGAGCCGCAACTTCAAACGGGGAGATCGGCAGGGT
CAGGCAGACCATCAGCGAGTCTATGCTGGTGAGAGCGGAGTACGGCTAGA
CGGACTCCGACATTGCGTTTTGTTGAGAAACACGATGACCCCTGGGCACA
CTATCAGAGGCCCTCTGACTGGTAGCCCAGTGGTCATCGTGCTTCTCAGC
ACCTACAACGGTGATCTGGCAAGAAAGAAAACGTGGGTTTTGTCAGCAAG
AGGGGGTGGAGCGGGCGGAGGAGGATATATAACTGGGGGTGCGTCCTGTC
GTGTGTGATCGTGAGGCGACTAAAAAATTTGACCACGCATCCGTTTTGTT
TCGACATGGAATGCCAACGCACCCCTGCCCCGTGTCGAGGAGTACTTCCT
TATTGTGGGAGCTGCCATACGGCGTTACCATATTATTTTGCGACGTATTT
CCAGTTTTTTTCTCCCCCCTTTTTGAGAGGAAGAGGGGTGCGAGGGAGGG
TGTCCTCTGTCTTTTTCGTCACCAAAGCCCCAGAAGCGTACAAGAAGCGT
CCGAAGGAGTGAGGGAGGGAAGGAGGGAGGGGGGTGGGCGGTCCATTTTT
CTTTCGTTGGTCGACAAAGCGCCCACCCGCTTACGAACTTGAGATTGAAG
AAATTCAGATTCAAGCACAACTTCAACAACTTGGCAAAGAACAGGTACTC
AGTCAAGAAGCCTACATGTTCACGAAAACCATGATAGTCGATGTTGGGTC
ACCCCACAGGGACAAGAAGAAACGAGCCTAGGTCTAAACGTAAGCGGTGT
TCAAGTGTTGGCGCGTTCTGTGTATTGCACACCGTAGGTGCTGGTGAATC
GGGTGTTTCAACCCACTTTCAGGAGCTGCGGTGCAATCAATCATGGCTAT
ACGTGTTTCGAACGTAAACTTCGTTTCATGGCTCTTCCAGGTGTCGGAGA
TTGATCTCAAGGTGGGGCTGCTTCCGGGCTTGCCGATGGCCCTCAAGGGC
ACCGTCGTCACGAAGGCACGGCTTAACCCCGTCAGGTGAGACTTGCCGCC
TCCTTCCTCGCCGCAGCCGGAACCGGACCATATCGCGTGTGCTCTGGGTA
GAAGCGAAGCGAAGCCTCGAGCTTCCGTAGGAGGAGGTGTTGGAGCCATG
CGACGACGCTGAGAGCGGAAGTAGTCCTGTTTTGTTTTTCGTTTCTTCGT
GTCTTGTTTGTGGCTTCAGTGATTTCTTTCTGTTCCACACTCGAACGCCG
AGAAGCAGTCTCCCGGTTCTCATCTCTTACTCGAGAGGAATGTCTTGGTA
ATGTCTTGGCGAGGCTTCCGATTCCCGGTGCGGTAGCACCACCCGTTGAC
GATGCACACGACCTCCTTCGCCTGTTGCCGCGTCGCCGGTCTATCGGGGT
CCGCGAATGCAGTGGTCTATCGTGCACTAGGAAGCTTGCGCGCCCTAGGT
TTTTTTGACCGACGATTCGGAGCTGTTGAGCCCCGAGTACATGCTCAATT
GCACGGCTGGGACCAATCAATGCTATAAGCCCGTGGAAGGTTTGTATACT
GACGTGGTAGCAGATACGGCAGCAAATGTGTTGGTTTCGACGAGTGTGCT
CGCTCTTGTCAAGTTCTCGCCATGCACCTGTTGCAGCGTTGTCTCCCGCG
CAGCGACTTTTTTTGTCGACGCCGTGTGTTGCTTCTGTTGATCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCTCCCCAC
CCTTGTCCGCCTCGTGCAACCCCACTTCAGCTCCGATTCTTTCACTGTCG
TGGTCGAGAGCACGTCTGTGACCAACAACAACATACTGTCGTTCTTGGAC
GGTGCCGTTGAAGTGCCCGTCGAGCAGGTGTACAGGTGGGTGGAGGAGAT
TTTGCCTGGTAATGATCCTCGTACATGGTTATCCTCGCTTGGGTTTGAGT
CTGGCAGACCAGCACGCCCGTGATACCGTGGTCGTCTTCGATTTGTATCA
CGTACGAACTTCCCCGCAGCTGCTTCTACACGCCTCGCCAACCAATGTTG
TACGGGCGGTATCCTGCTTTGGGCTAACTCTCGTAGAATTTAGTGCTATG
ATTTTGGCGGGCTGTCGAGTCTCGAGTTGAAAGAGTATGCGATGCCGTAG
GGAGTTTGACGTTTTGAAGGGCTTGTCGATGTCTGCCGGGTGTTCAAGTG
GCGTAAAGCGGCGTGGAACGTTTGGCCTCCCTTTGCGACCCCTCTGTTGC
CTGATTCGGCCATTTTCTCGTGCGTTTTTCTGCAAAATAGCTCGTAAAAC
ACTCCGGAGTACAAGTATAACGTTGGAAGGGGGCCTCTGTCCCCACAACC
TCTCCTCGTTCCCGCTCCCCACAACCCAGTAGAGGCCCCGTTTAAGTCTG
CTTGGCCCAAGGGCAAACGCCGGCCTTATATCGGGTGCCCGACACCATTC
ATAGTATGGGGTAACTTGAATATCTGTGCCACGCGATTTCACCGGCCTTA
ACCAGGGCAACCGGCCTTAAACGAGCGGTCTTAAACAGGGAAAACTACTC
TGTAACAATATGTTCCGCGCGGGTGTGGGTCACCCGCATTTCTGTAATCT
TTGGTGTTCCAACTTCAGAATTTTCCTCGTCTCGGCCCTGGTTTCTCAAC
CACCTTTGTTCACGTGCCGCACTCCTTGCACAAGCATGTCGGACCTCAAA
CGTGCATACGTCAATACGGTATGTGGCCTGATGAATTGTATATGCCGTGT
TCATCGCAAACCCCCCGTTTGGCGTGACATAAACAGCTCTCCATGTGGGG
TGTGTATGACAGCTAGCTGCCCTCCCGTCATTACTACACCCAAGGCCCAA
GCAGTTGAAGTCATCAGCACCCTGGTGTCCACTTCGTGACCGATGTTTTC
TATTTTTCTCTTTGACTGATTTTGTTGTCGTGTGTCGCGTTAATGTTCCG
CAGCACCCTCAGAGGCAGCGTTCCGGAGGCGAAGCTGTCCACGTACTACC
TCGACGATGACATGCGAATCAGCCGAATGTCCGACGATCATGTTTTCGTG
TTCGTTCGGGCCCCGTAAGCATGTATCGGCAGAGGCTTGTGTACGAATCC
GAAAAAGCGGACGTCTTCATCTCGCCTGATTTTGTTCATTTTTTGTCATT
TTGTTCTGTTCCTCTCTTTGTGGTTAATTTGTGGAAATCTGTTAGTGAGG
GAGAGGAGGCACGCACTTGTATTAATGATATTGCTTTCGAGTTTTGACGG
TGTTTGCCAGCGTTTGTTTGGAAGTAACGGCTTGCCAAGCGGCATGTCGG
GTTCGTGCGGAGCATGTCCAAAATGGTGTGTCGGGGAGGGAGGAGGGGTT
AGACTAGAGAGGGGTAGAGCGAGGAAATCCTGTGGAGTAGGCTCTAGAGG
ACATATTGAGAGAGAGTAGCACGTGGTGACCCTTGGGCGTCTTGAATTAA
GCGTTTGAGTTGAAACCGCCAAGACGGGAAAAGCCCGCGGAATTTTGATA
ATTATGGCTTGTGGCATGGATATCTTGTGGAAAGGGGAAGCTGTAGCATG
GACAGTCAGAGAACGAATTGGGCTAGTTTTAGGGTCGATCACCCGCGCTA
CCCATTTGGTGGCTTTTCAGATAAACCATCCAGCCTATTCGCCTCAACCG
ACCCGTCGGACCTACACATGTGTGTAGCTGTTGAACTTGTGTTGAATCGC
GGGAACGATCACGGAGGACAAAATGTGCGCGATGGGTCGGGCACCGGGAA
AGTGGCGCGGGGTGATGAAATCGGTCGGCTGTCAACACATACATGTTTCG
GTCCCTGTGGTGTTGGCAAAGTAGTGTGTAGCCTCCCATTATTGTTTTTG
CTTATTATCCCCTGCGATAAATAGTGGACGGAAGAACTTCCACAGACTGT
AGTTGTACTATCGGTGGCCGCCGTGTCGCCGTGCT
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Coding sequence (CDS) from alignment at Scaffold_647:14705..21389-

>EsuBft1000_6a-0001 ID=EsuBft1000_6a-0001|Name=EsuBft1000_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=753bp|location=Sequence derived from alignment at Scaffold_647:14705..21389- (Ectocarpus subulatus male Bft15b)
ATGATGAGCTTCGAGGCAGGGGACTTCCCGAGCGACGTGGGGGACGCCGC
GGGGTCGTCTGCGGTGCCGGCGGTGCTGGCCGACGACAACCCCGAGCTCA
GAGAGACCATGAAACGCGAGGTTCTGTCCATCGCCGCCACTTCCAACAGA
GGCCAAGTAGCCACGCAGGAAGAAAAGGATGCGGCAATGGACCTGATTTT
TCAGCTTGAGTCCCTGAACCCGACTCCGGATGCCACGAATGTCAACACCA
TCGGAGGGGCGTGGGAGCTGGTGTACACGGACACGCAACCATTCCGTTGT
TCCCCCTTTTTCATGGCCCTGGGGGAGGTGTTCGGCGAAGAAAAGGGCCA
AGCGGAGACTTTGTTCTCGCTGCACCGAGCCGCAACTTCAAACGGGGAGA
TCGGCAGGGTCAGGCAGACCATCAGCGAGTCTATGCTGGTGTCGGAGATT
GATCTCAAGGTGGGGCTGCTTCCGGGCTTGCCGATGGCCCTCAAGGGCAC
CGTCGTCACGAAGGCACGGCTTAACCCCGTCAGCTCCGATTCTTTCACTG
TCGTGGTCGAGAGCACGTCTGTGACCAACAACAACATACTGTCGTTCTTG
GACGGTGCCGTTGAAGTGCCCGTCGAGCAGGTGTACAGCACCCTCAGAGG
CAGCGTTCCGGAGGCGAAGCTGTCCACGTACTACCTCGACGATGACATGC
GAATCAGCCGAATGTCCGACGATCATGTTTTCGTGTTCGTTCGGGCCCCG
TAA
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