prot_Ecto-sp9_F_contig1048.455.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig1048.455.1
Unique Name	prot_Ecto-sp9_F_contig1048.455.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	753

Homology

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BLAST of mRNA_Ecto-sp9_F_contig1048.455.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ87_ECTSI)

HSP 1 Score: 770 bits (1989), Expect = 1.480e-273
Identity = 446/686 (65.01%), Postives = 460/686 (67.06%), Query Frame = 0

Query:   68 MDSDGKPVGVEGSPLFFDGDNISVSSTRRGGVHQDGLDAE-VSSVATTTGTATTVSLVATNYLGDGSISTFEPSTLVEVGNETVRLDLRIRDWSFCSPFGRDGGRRCMAEPQDIFLQNEGALPLPPAPPPPHTLLIPRCDGETVATFRFVCDPRLVECADIVSVKYYLGEADQDPGQAPNTATIGVARGSGENGTSTGSSGALEEFWGTGVYERNLTSAEVGSFLNVSSLTPGLDYVFWAVWEHGNGSAPESNSRDFDLSRVQYWQCPGTTIERNFEVGASLSVSLVVNGSTALVPLCGDSVSASSPDSSNTXXXXXXXXXXXXXXXXXSCQKIGTDGVATETSGPSRRLSAPGDESHPSPALPARQGRGYRLLQEDQGTNASLDETEGGAGWTWDSDGPIFGLGELSRIRLSSHVLLLGDDDNDSSDYGEWAPLRNTSSWVATAAAGATENREEGRGGRAGVITASLEPFDSQAVFSALLFFSKVEIVQEESDTGVEAATWVAIAFGFLLLWLLGCYGVRLAKHRHAAKTWPSAVARAAAARSHGGLFDDDASSFGSPTSSEADSSMGGVKELQIFPMMMKAASKSKLEFSDRSDAVRITSAEEDEQSLCAPKAPGWTTPGSGSLNCIHDQNISSSXXXXXXAGSNRNVDNGNMASGVFPSPPPFHYRVPAEAFPLTDAMLELPV 752
            MDSDGKPVGVEGSPLFFD DNISVSSTRR GV+QDGLDAE VSSVATTTGTATTVSLVATNYLGDG+ISTFEPSTLVEVGNETVRLD+RIRDWSFC+PFGRDGGRRCMAEPQDIFLQNEGALPLPPAPPPPHTLLIPRCDGETVATFRFVCDPRLVECAD+VSVKYYLGEADQDPGQAPNTATIGVARGSGENGTST SSGALEEFWGTGVYERNLT AEVGSFLNVSSLTPGLDYVFW+VWEHGNGSAPESNSRDFDL RVQYW                                                                                        GD          R G G R    D G   +L                          RL+  VL                                                                   +  ++Q+       AATWVAIAFGFLLLWLLGCYGVRLAKHRHAAKTWPSAVARAAA RSHGGLFDDDASSFGSPTSSEADSSMGGVKELQIFPMMMKA  KSKLEFSDRSDAVR TSAEEDEQS+CAPKAPGWTTPGSGSLNCIHDQN SS+XXXXXXA SNRNVDNGNMAS VFPSPPPFHYRVPAEAFPLTDAMLELPV
Sbjct:    1 MDSDGKPVGVEGSPLFFDSDNISVSSTRRSGVYQDGLDAEEVSSVATTTGTATTVSLVATNYLGDGNISTFEPSTLVEVGNETVRLDVRIRDWSFCTPFGRDGGRRCMAEPQDIFLQNEGALPLPPAPPPPHTLLIPRCDGETVATFRFVCDPRLVECADVVSVKYYLGEADQDPGQAPNTATIGVARGSGENGTSTSSSGALEEFWGTGVYERNLTRAEVGSFLNVSSLTPGLDYVFWSVWEHGNGSAPESNSRDFDLPRVQYW----------------------------------------------------------------------------------------GDRE--------RGGGGGRPGGRDHGFAGAL--------------------------RLAGGVL-------------------------------------------------------------------RAVVLQQ-------AATWVAIAFGFLLLWLLGCYGVRLAKHRHAAKTWPSAVARAAA-RSHGGLFDDDASSFGSPTSSEADSSMGGVKELQIFPMMMKAEFKSKLEFSDRSDAVRSTSAEEDEQSICAPKAPGWTTPGSGSLNCIHDQNSSSNXXXXXXADSNRNVDNGNMASEVFPSPPPFHYRVPAEAFPLTDAMLELPV 489

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig1048.455.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig1048.455.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
Uncharacterized	1.480e-273	65.01	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..564
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..24
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 565..586
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 587..752
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.696
None	No IPR available	TMHMM	TMhelix		coord: 566..588

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig1048	contig	Ecto-sp9_F_contig1048:12858..17893 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig1048.455.1	mRNA_Ecto-sp9_F_contig1048.455.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig1048 12858..17893 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig1048.455.1 ID=prot_Ecto-sp9_F_contig1048.455.1|Name=mRNA_Ecto-sp9_F_contig1048.455.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=753bp
MRSLLHALPAALLSVLGGTSGAASQIQPAVVESFAHSALLSVRVVDGEPN
DAGDHEAMAVVVSTITEMDSDGKPVGVEGSPLFFDGDNISVSSTRRGGVH
QDGLDAEVSSVATTTGTATTVSLVATNYLGDGSISTFEPSTLVEVGNETV
RLDLRIRDWSFCSPFGRDGGRRCMAEPQDIFLQNEGALPLPPAPPPPHTL
LIPRCDGETVATFRFVCDPRLVECADIVSVKYYLGEADQDPGQAPNTATI
GVARGSGENGTSTGSSGALEEFWGTGVYERNLTSAEVGSFLNVSSLTPGL
DYVFWAVWEHGNGSAPESNSRDFDLSRVQYWQCPGTTIERNFEVGASLSV
SLVVNGSTALVPLCGDSVSASSPDSSNTSPTSSAASSSSTTSGSSSCQKI
GTDGVATETSGPSRRLSAPGDESHPSPALPARQGRGYRLLQEDQGTNASL
DETEGGAGWTWDSDGPIFGLGELSRIRLSSHVLLLGDDDNDSSDYGEWAP
LRNTSSWVATAAAGATENREEGRGGRAGVITASLEPFDSQAVFSALLFFS
KVEIVQEESDTGVEAATWVAIAFGFLLLWLLGCYGVRLAKHRHAAKTWPS
AVARAAAARSHGGLFDDDASSFGSPTSSEADSSMGGVKELQIFPMMMKAA
SKSKLEFSDRSDAVRITSAEEDEQSLCAPKAPGWTTPGSGSLNCIHDQNI
SSSNNNNNNAGSNRNVDNGNMASGVFPSPPPFHYRVPAEAFPLTDAMLEL
PV*