prot_Ecto-sp9_F_contig10476.451.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10476.451.1
Unique Nameprot_Ecto-sp9_F_contig10476.451.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length54
Homology
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR68_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.600e-25
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 MTATGAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAR 53
            MTATGAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAR
Sbjct:  171 MTATGAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAR 223          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FCW2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 9.350e-9
Identity = 24/45 (53.33%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    8 DASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIA 52
            +A+EAP VD ++P   + +RLH+G+R+RA LNM+HT+RH+QA+I+
Sbjct:  140 EATEAPVVDDAKPKAVIAVRLHNGKRIRATLNMNHTIRHLQALIS 184          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7H8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.620e-8
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    5 GAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAII 51
            GA +A+E P VD  +P+TTLQ+RLHDG R+R  LN+ HT+R + AII
Sbjct:  176 GAAEAAERPVVDDKKPTTTLQLRLHDGTRLRETLNLDHTIRDLHAII 222          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: SEP (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC87_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.380e-8
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    5 GAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAII 51
            GA +    P VD +QP TTLQIRL DGRR+RA+LN+ HTVR +QA I
Sbjct:  177 GADEVGAPPVVDDAQPVTTLQIRLADGRRLRARLNLSHTVRDVQAFI 223          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Protein (tyrosine phosphatase SHP1/Cofactor for p97 ATPase-mediated vesicle membrane fusion n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAT9_PLAHL)

HSP 1 Score: 52.4 bits (124), Expect = 2.330e-7
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0
Query:   10 SEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAII 51
            SE P  D  +P+TTLQIRLH+G+R+R  LNM HT+R + AII
Sbjct:   19 SERPVTDDKKPTTTLQIRLHNGQRLRETLNMDHTIRDLHAII 60          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Peroxin-1 (n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXI6_PYTIN)

HSP 1 Score: 53.5 bits (127), Expect = 7.310e-7
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    9 ASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAII 51
            AS+ P VD  QP+TTLQIRLH+G R+R  LN+ HTVR + AII
Sbjct: 1245 ASDRPVVDDKQPTTTLQIRLHNGTRLRETLNLTHTVRDLHAII 1287          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLP8_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 8.250e-7
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    5 GAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAII 51
            GA   SE P +D  +P TTLQIRLH+G+R+R  LN+ HT+R + AII
Sbjct:  171 GAAVPSERPVIDDKKPKTTLQIRLHNGQRLRETLNLEHTIRDLHAII 217          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Uncharacterized (protein n=19 Tax=Phytophthora TaxID=4783 RepID=D0N5D2_PHYIT)

HSP 1 Score: 52.8 bits (125), Expect = 1.130e-6
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   11 EAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAII 51
            E P +D  +PSTTLQIRLH+G+R+R  LN+ HTVR + AII
Sbjct:  175 ERPVIDDKKPSTTLQIRLHNGQRLRETLNLDHTVRDLHAII 215          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRU2_HYAAE)

HSP 1 Score: 51.2 bits (121), Expect = 4.100e-6
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   11 EAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAII 51
            E P VD  +P+TTLQ+RLH+G+R+R  LNM HT+R + AII
Sbjct:  172 ERPVVDDKKPTTTLQLRLHNGQRLRETLNMDHTLRDLHAII 212          
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Match: Peroxin-1 (n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCQ5_PHYRM)

HSP 1 Score: 51.2 bits (121), Expect = 4.790e-6
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   11 EAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAII 51
            E P +D  +P+TTLQIRLH+G+R+R  LN+ HT+R + AII
Sbjct: 1003 ERPVIDDKKPTTTLQIRLHNGQRLRETLNLDHTIRDLHAII 1043          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10476.451.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
Uncharacterized1.600e-25100.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR68... [more]
Hypothetical9.350e-953.33protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Uncharacterized4.620e-857.45protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
SEP6.380e-861.70domain-containing protein n=1 Tax=Tribonema minus ... [more]
Protein2.330e-759.52tyrosine phosphatase SHP1/Cofactor for p97 ATPase-... [more]
Peroxin-17.310e-762.79n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2... [more]
Uncharacterized8.250e-755.32protein n=2 Tax=Phytophthora kernoviae TaxID=32545... [more]
Uncharacterized1.130e-660.98protein n=19 Tax=Phytophthora TaxID=4783 RepID=D0N... [more]
Uncharacterized4.100e-658.54protein n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]
Peroxin-14.790e-656.10n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001012UBX domainPFAMPF00789UBXcoord: 19..51
e-value: 7.9E-5
score: 22.8
IPR001012UBX domainPROSITEPS50033UBXcoord: 17..53
score: 9.854
NoneNo IPR availableGENE3D3.10.20.90coord: 1..53
e-value: 3.1E-12
score: 48.7
NoneNo IPR availablePANTHERPTHR23333UBX DOMAIN CONTAINING PROTEINcoord: 3..52
NoneNo IPR availablePANTHERPTHR23333:SF20GH01724Pcoord: 3..52
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 3..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10476contigEcto-sp9_F_contig10476:3600..3761 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10476.451.1mRNA_Ecto-sp9_F_contig10476.451.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10476 3600..3788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10476.451.1 ID=prot_Ecto-sp9_F_contig10476.451.1|Name=mRNA_Ecto-sp9_F_contig10476.451.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=54bp
MTATGAPDASEAPEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAI
IAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001012UBX_dom
IPR029071Ubiquitin-like_domsf