mRNA_Ecto-sp9_F_contig10466.441.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB2_ECTSI) HSP 1 Score: 595 bits (1533), Expect = 3.040e-206 Identity = 317/324 (97.84%), Postives = 320/324 (98.77%), Query Frame = 3
Query: 3 GPNELPLFLEGDEELTALAEESAGAAQGLATQLSAVRRSHMSCWGIANSKSGTSGSGSGDAGKAAMVTNDDDEQKVGSDNGKDKGEGPTTISEGNAEGEEAVAATEHGSCMGWWSGVLGRWHERTQLVDPGLQKKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRKKSVDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFGGAGRTQQPDTKYK 974
GPNELPLFLEGDE+LTALAEESAGAAQGLATQLSAVRRSHMSCWGIAN KSG SGSGSGDAGKAAMVTNDDDEQKVG+DNGKDKGEGPTTISEGNAEGEEAVAATEHGSCMGWWS VLGRWHERTQLVDPGLQKKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEV+DDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRKKSVDRKASKGRKIKYVTHPKMQNFMF QEYEAPPMEPSELFASLFGGAGRTQQPDTKYK
Sbjct: 285 GPNELPLFLEGDEQLTALAEESAGAAQGLATQLSAVRRSHMSCWGIANIKSGDSGSGSGDAGKAAMVTNDDDEQKVGNDNGKDKGEGPTTISEGNAEGEEAVAATEHGSCMGWWSDVLGRWHERTQLVDPGLQKKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVVDDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRKKSVDRKASKGRKIKYVTHPKMQNFMFPQEYEAPPMEPSELFASLFGGAGRTQQPDTKYK 608
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Apoptosis-antagonizing (transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N8_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.070e-36 Identity = 120/319 (37.62%), Postives = 160/319 (50.16%), Query Frame = 3
Query: 6 PNELPLFLEGDEELTALAEESAGAAQGLATQLSAVRRSHMSCWGIANSKSGTSGSGSGDAGKAAMVTNDDDEQKVGSDNGKDKGEGPTT-ISEGNAEGEEAVAATEHGSCMGWWSGVLGRWHERTQLVDPGLQKKFKVVNQGPWAQITASLADRERANRRSFMTESET-SEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRK-------KSVDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFG 935
P LP + + L LA +A A LA LSA+R+ HM GIA VG +G+++ G G+ E+A+A ++ C WW + RW RT + P LQ+KFK VNQG WAQ+ AS+AD+ERA R+ F ++T + GR +A + XXXXXXXXXX D+G+ + + A+P+D EVLDDR LY H LKEF++ G G + VDR+ASKGRK++Y H K+QNF F QEY PPM+ ELFASLFG
Sbjct: 162 PRALPAYRAAEPALAPLAAAAAARADALAAGLSALRKGHMRQAGIA----------------------------VGGGDGQEEAGGXVPEXXXGDTIWEDALA--DYRRCRAWWERCVERWQRRTAALSPALQRKFKAVNQGVWAQVEASMADKERARRKLFALRADTDARCFGRFIAPPSEEXXX-----XXXXXXXXXXXXXXIDDGERNAAALRASRWRADPIDCEVLDDRELYHHQLKEFVEG-GEGGXXXXXXXXXXXXXXXXXXXXXRKVDRRASKGRKLRYEVHAKLQNFAFPQEYGPPPMDADELFASLFG 444
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRT7_GLOUD) HSP 1 Score: 96.3 bits (238), Expect = 1.230e-17 Identity = 67/204 (32.84%), Postives = 96/204 (47.06%), Query Frame = 3
Query: 342 WSGVLGRWHERTQLVDPGLQ-KKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRKKSVDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFGGAGRT 950
++ +L + +T L G Q KKFK VNQ +Q+ + LAD +R R++ +DA G DD GD D + + + DD + YQ LLKEF+++ G +G RK +KK V+RKASKGR+++Y HPK++NFMF Y P M+ ELF S+FG T
Sbjct: 290 YNDILNTYTRKTNLAGAGSQAKKFKAVNQDILSQVESVLADVQRVKRKAH-------------APLEMDAENG------------GMTTAEEDDSGDSDRLDEL------------MYDDSDFYQQLLKEFLESGGGSGQDTLLQRTHRK-KKKIVNRKASKGRQLRYTVHPKLENFMFPDPYPKPEMDVDELFRSVFGQVSST 455
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G086_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 8.670e-17 Identity = 65/201 (32.34%), Postives = 98/201 (48.76%), Query Frame = 3
Query: 342 WSGVLGRWHERTQLVD--PGLQKKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVR-RKSRKKSVDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFG 935
++ +L ++T L++ P +KKFK VNQ +Q+ A +AD R R++ + + E + G +L LD + DD YQHLLKEF+D + AG +A+ R + ++K V+RKASKGR+I+YV HPK++NFMF + + P M+ ELF SLFG
Sbjct: 238 YNSILSTALQKTTLLNGKPMKEKKFKAVNQDILSQVDAVVADPLRVKRKAHIPKEEATSKEGDELE-----------------------------------------------LDELMYDDAEFYQHLLKEFVDQNAEAGGWQAALRQRINRKKRKLVNRKASKGRQIRYVVHPKLENFMFPEPHAKPSMDIDELFKSLFG 391
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEA2_BRELC) HSP 1 Score: 91.7 bits (226), Expect = 3.570e-16 Identity = 63/201 (31.34%), Postives = 97/201 (48.26%), Query Frame = 3
Query: 342 WSGVLGRWHERTQLVDPGLQ---KKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRKKSVDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFG 935
+S +L + +T L+ G KKFK VNQ +Q+ + L D +R R++ L ++A ++ + LD + DD + YQ LLKEF+++SG+ G+G A+ + +KK V+RKASKGR+++Y HPK++NFMF + Y P M+ ELF SLFG
Sbjct: 277 YSNILNTYTRKTDLIAGGKNRQAKKFKAVNQDILSQVESVLLDPQRVKRKAHAP-------LENEVAVDIE-----------------------------------------DQLDELMYDDSDFYQQLLKEFIESSGS-GTGLDAIRRTHRKKKKVVNRKASKGRQLRYTVHPKLENFMFPEPYPIPDMDLDELFRSLFG 428
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTD8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.980e-15 Identity = 71/217 (32.72%), Postives = 103/217 (47.47%), Query Frame = 3
Query: 300 EAVAATEHGSCMGWWSGVLGRWHERTQLVDPGLQ---KKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRKKS--VDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFG 935
+ + A H + + ++ +L + +T L G KKFK VNQ AQ+ + L D +R R K LD A+ S +E ED++ + + DD + YQ LLKEF+++ G +G A+ VRR RKK V+RKASKGR+++Y HPK++NFMF + Y P M+ ELF SLFG
Sbjct: 279 QEITAANH-ALLPQYNDILNTYTRKTDLAAGGKNSQAKKFKAVNQDILAQVESVLVDPQRVKR---------------KAHAPLDVAE------------------TSAEESAEDLLDEL------------MYDDSDFYQQLLKEFIESGG---AGQDAM-VRRTHRKKKKLVNRKASKGRQLRYTVHPKLENFMFPEPYPKPEMDVDELFRSLFG 445
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2H0_HYAAE) HSP 1 Score: 89.0 bits (219), Expect = 3.520e-15 Identity = 71/213 (33.33%), Postives = 98/213 (46.01%), Query Frame = 3
Query: 312 ATEHGSCMGWWSGVLGRWHERTQLVDPGLQ---KKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRKKS--VDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFG 935
AT + + ++ +L + +T L KKFK VNQ AQ+ + L D R R++ LD + D G G E LD + DD + YQ LLKEF++ SG GSG V+R RKK+ V+RKASKGR+++Y HPK++NFMF + Y P M+ +ELF SLFG
Sbjct: 316 ATSSSAMLPQYNDILSTYTRKTDLAAGSKNTQAKKFKAVNQDILAQVESVLVDPRRVKRKAHAL---------------LDVPEADVTEG------------------------------GEEQLDELMYDDSDFYQQLLKEFIE-SGGGGSGQ----VKRTHRKKNRIVNRKASKGRQLRYTVHPKLENFMFPEPYPRPEMDVTELFRSLFG 478
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GZZ6_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 4.230e-15 Identity = 66/210 (31.43%), Postives = 100/210 (47.62%), Query Frame = 3
Query: 315 TEHGSCMGWWSGVLGRWHERTQLVDPGLQ---KKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVRRKSRKKSVDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFG 935
T + + + ++ +L + +T L KKFK VNQ AQ+ + L D +R + RK +DA + D AG EG ED++ + + DD + YQ LLKEF+++ G + V + +KK+V+RKASKGR+++Y HPK++NFMF + Y P M+ ELF SLFG
Sbjct: 269 TSNRALLPQYNEILNTYTRKTDLAAGSKNNQAKKFKAVNQDILAQVESVLVDPQR---------------IKRKAHALVDAPEAD--AG----------------EGAEDMLDEL------------MYDDSDFYQQLLKEFIESGGXXXGQDAMVRRTHRKKKKAVNRKASKGRQLRYTVHPKLENFMFPEPYPKPEMDVDELFRSLFG 433
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Uncharacterized (protein AlNc14C5G775 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0Z5_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.620e-14 Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 3
Query: 657 KDGAE-PLDLEVLDDRNLYQHLLKEFMDASGTAGSGYSAVPVR-RKSRKKSVDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEPSELFASLFG 935
K+G E LD + DD YQHLLKE++D + AG +A+ +R + ++K V+RKASKGR+I+YV HPK++NFMF + + P M+ ELF SLFG
Sbjct: 292 KEGNELELDELMYDDAEFYQHLLKEYIDQNTEAGGWQAALRLRINRKKRKLVNRKASKGRQIRYVVHPKLENFMFPEPHANPSMDIDELFRSLFG 386
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Match: Apoptosis-antagonizing (transcription factor n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YUR8_9FUNG) HSP 1 Score: 83.6 bits (205), Expect = 1.630e-14 Identity = 70/211 (33.18%), Postives = 102/211 (48.34%), Query Frame = 3
Query: 351 VLGRWHERTQLV-DPGLQKKFKVVNQGPWAQITASLADRERANRRSFMTESETSEFLGRKLAKHLDAAKGDGDAGSAXXXXXXXXXXRSDDEGDEDVVGRVRRKDGAEPLDLEVLDDRNLYQHLLKEFM-------DASGTAGSGYSAVPVRRKSRKKSVDRKASKGRKIKYVTHPKMQNFMFSQEYEAPPMEP-SELFASLFGGAGRTQQ 956
+ +WH + Q+ L K+FK +NQG QI LAD+ER +R+ + ++ + LG+K A AA+ DE++ KD + D EV DD + YQ LL+E + D G+ ++A+ + K KK VD KASKGRK++Y H K+Q+FM E EL+ASLFG RT+Q
Sbjct: 29 TMEKWHNKVQVAAGVPLNKRFKAINQGIHEQIGQVLADKERLVKRTQLKRNDY-QILGKKEA--APAAE------------------------DENIDAE---KDPLKDYDGEVFDDTDFYQQLLRELIESRMVDTDDPMAIGARWAALKQQTKKNKKKVDTKASKGRKLRYHVHDKLQSFMVPIPAGTWHQEMVDELYASLFGQQQRTEQ 209 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10466.441.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10466.441.1 >prot_Ecto-sp9_F_contig10466.441.1 ID=prot_Ecto-sp9_F_contig10466.441.1|Name=mRNA_Ecto-sp9_F_contig10466.441.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=285bp MSCWGIANSKSGTSGSGSGDAGKAAMVTNDDDEQKVGSDNGKDKGEGPTTback to top mRNA from alignment at Ecto-sp9_F_contig10466:390..4229+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10466.441.1 ID=mRNA_Ecto-sp9_F_contig10466.441.1|Name=mRNA_Ecto-sp9_F_contig10466.441.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3840bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10466:390..4229+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10466:390..4229+ >mRNA_Ecto-sp9_F_contig10466.441.1 ID=mRNA_Ecto-sp9_F_contig10466.441.1|Name=mRNA_Ecto-sp9_F_contig10466.441.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1710bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10466:390..4229+ (Ectocarpus species9 EcSCA_722f female)back to top |