mRNA_Ecto-sp9_F_contig10465.440.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10465.440.1
Unique NamemRNA_Ecto-sp9_F_contig10465.440.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C0_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 7.220e-87
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 1 
Query:   13 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHE R +
Sbjct:  159 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVS 325
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC21_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.580e-72
Identity = 141/167 (84.43%), Postives = 147/167 (88.02%), Query Frame = 1 
Query:   13 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            Q+SILTSSGDSTCI WDVEMGV   HFTDH GDVMSVSILP V          XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDGK+FGTGSDDSSCRLFDMRCYGE NYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVT++TG+PAYQLAGHE R +
Sbjct:  161 QDSILTSSGDSTCIFWDVEMGVAKQHFTDHMGDVMSVSILPHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFFPDGKSFGTGSDDSSCRLFDMRCYGEVNYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTSNTGMPAYQLAGHENRVS 327
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KDD3_HETAK)

HSP 1 Score: 196 bits (497), Expect = 8.220e-59
Identity = 123/169 (72.78%), Postives = 138/169 (81.66%), Query Frame = 1 
Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            L + SI+TSSGDSTCIIWDV  G    HFTDH GDVMSV++    +KN+FVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXX   FPDG AFGTGSDDSSCR+FDMRCYGE N FGND+ILCGITSV+FS+SGRLLFAGYDDYN YVWD   +     ++L GH+ R +
Sbjct:  156 LDEASIITSSGDSTCIIWDVNRGEAREHFTDHQGDVMSVAVSDQ-NKNIFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXVTMFPDGFAFGTGSDDSSCRMFDMRCYGEVNQFGNDRILCGITSVSFSKSGRLLFAGYDDYNSYVWDTLKNDPSETFKLQGHDNRVS 323
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6Z757_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.390e-56
Identity = 122/169 (72.19%), Postives = 137/169 (81.07%), Query Frame = 1 
Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            L + +I+TSSGDSTCI+WDVE G     F DH GDVMSVSI P   +N+F+SG  XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDG A GTGSDDSSCRLFD+R YGE N F NDKILCGITSV++S+SGR +FAGYDDYNCY WDV ++TG   YQL GHE R +
Sbjct:  167 LDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMFISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVS 334
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A397FXD3_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.030e-53
Identity = 122/169 (72.19%), Postives = 137/169 (81.07%), Query Frame = 1 
Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            L + +I+TSSGDSTCI+WDVE G     F DH GDVMSVSI P   +N+F+SG  XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDG A GTGSDDSSCRLFD+R YGE N F NDKILCGITSV++S+SGR +FAGYDDYNCY WDV ++TG   YQL GHE R +
Sbjct:  522 LDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMFISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVS 689
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HG74_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.370e-52
Identity = 119/170 (70.00%), Postives = 134/170 (78.82%), Query Frame = 1 
Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL-AGHEVRAT 513
            L +  ILTSSGDSTCI WD+  G     F+DH GDVMS+++ PS D N+FVSG  XXXXXXXXXXXXXXXXXXXXXXXXX    +FPDGKAFGTGSDDS+CRLFDMRCYGE N FGND+ILCGITSV FS+SGRLLFAGYDDYN  VWDV ++    A+QL   HE R +
Sbjct:  161 LDEGRILTSSGDSTCIHWDINSGEVLKTFSDHKGDVMSLAVNPS-DSNIFVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVEWFPDGKAFGTGSDDSTCRLFDMRCYGEVNRFGNDRILCGITSVGFSKSGRLLFAGYDDYNTIVWDVLSTGKQQAFQLHQPHENRVS 329
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K4C7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.770e-51
Identity = 117/161 (72.67%), Postives = 131/161 (81.37%), Query Frame = 1 
Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL 489
            L +  ILT+SGDSTCI WD+E G     F+DH GDVMS+S  P+ +KN+FVSG  XXXXXXXXXXXXXXXXXXXXXXXXXXX  FFPDG AFGTGSDDS+CRLFDMRCYGE N F ++KILCGITSVAFSRSGRLLFAGYDD+NCY WD   +    A+QL
Sbjct:  161 LDESQILTASGDSTCIHWDIESGEVLNTFSDHKGDVMSLSTCPT-NKNLFVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAFFPDGNAFGTGSDDSTCRLFDMRCYGEVNKFAHEKILCGITSVAFSRSGRLLFAGYDDFNCYGWDTLGNGKNYAFQL 320
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Guanine (nucleotide-binding protein subunit beta-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6F1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.990e-50
Identity = 89/173 (51.45%), Postives = 109/173 (63.01%), Query Frame = 1 
Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTN-STGIPAYQL---AGHEVRAT 513
            +  ++ILTSSGDSTCI WD+E G   + FTDH GDVMSV++ P+ D+N+FVSGSC                             FFP+G  FGTGSDDSSCR+FD+RCY E N F +D+ILCGITSVAFS+SGRLL AGYDDY  +VWD    +   PA+      GHE R +
Sbjct:  153 IGSQNILTSSGDSTCIYWDIERGEPLSSFTDHNGDVMSVAVHPT-DRNLFVSGSCDATSKLFDIRQQGCVATFVGHESDINAVNFFPNGMCFGTGSDDSSCRMFDLRCYQEVNTFMSDRILCGITSVAFSQSGRLLLAGYDDYMTHVWDALKPNASSPAFSTDKNQGHENRVS 324
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: WD40 (repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP31_9ARCH)

HSP 1 Score: 164 bits (414), Expect = 2.090e-48
Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 1 
Query:   52 IIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            ++WD+E+G +   F DH  DVMS+SILP+VD+N+FVSGSC      XXXXXXXXXXXXXXXXXXXXXX  FPDGK  GTGSDD++CR FD+R  GE + F +D I+CGITSV FSRSGR+LFAGYDDYNC  WDV  ST    YQL GHE R +
Sbjct:    1 MLWDIELGQSKQTFADHEADVMSLSILPTVDQNLFVSGSCDRTAKVXXXXXXXXXXXXXXXXXXXXXXRLFPDGKGIGTGSDDTTCRFFDIRSCGEVSQFRSDNIVCGITSVTFSRSGRILFAGYDDYNCLGWDVLGSTDKHHYQLQGHENRVS 154
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4N3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.090e-48
Identity = 114/161 (70.81%), Postives = 130/161 (80.75%), Query Frame = 1 
Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL 489
            L +  ILTSSGDSTCI WD+E G     F+DH GDVMS++I P+ + ++FV    XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFP G AFGTGSDDS+CRLFDMRCYGE N F ++KILCGITSVAFSRSGRLLFAGYDD+NCY WD  ++    A+QL
Sbjct:  160 LDEGQILTSSGDSTCIHWDIESGEVLKTFSDHKGDVMSLAISPT-NNSLFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFPGGHAFGTGSDDSTCRLFDMRCYGEVNKFAHEKILCGITSVAFSRSGRLLFAGYDDFNCYSWDTLSNGKNHAFQL 319
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized7.220e-8796.41protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C0... [more]
WD40-repeat-containing3.580e-7284.43domain protein n=1 Tax=Tribonema minus TaxID=30337... [more]
Hypothetical8.220e-5972.78protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized1.390e-5672.19protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A... [more]
Uncharacterized1.030e-5372.19protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A... [more]
Hypothetical1.370e-5270.00protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
Hypothetical1.770e-5172.67protein n=2 Tax=Odontella aurita TaxID=265563 RepI... [more]
Guanine2.990e-5051.45nucleotide-binding protein subunit beta-1 n=1 Tax=... [more]
WD402.090e-4865.58repeat domain-containing protein n=1 Tax=archaeon ... [more]
Hypothetical4.090e-4870.81protein n=2 Tax=Pseudictyota dubia TaxID=2749911 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10465contigEcto-sp9_F_contig10465:277..3884 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.2
Seed ortholog evalue3.4e-70
Seed eggNOG ortholog2880.D7G2C0
Preferred nameGNB1
KEGG koko:K04536,ko:K04537,ko:K04538,ko:K07825
KEGG Pathwayko04011,ko04014,ko04062,ko04151,ko04371,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04744,ko04926,ko05032,ko05034,ko05167,ko05200,map04011,map04014,map04062,map04151,map04371,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04744,map04926,map05032,map05034,map05167,map05200
GOsGO:0000132,GO:0000187,GO:0000226,GO:0000278,GO:0000749,GO:0000750,GO:0001101,GO:0001403,GO:0001654,GO:0001666,GO:0001667,GO:0001750,GO:0001775,GO:0001917,GO:0001932,GO:0001934,GO:0002009,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0003007,GO:0003008,GO:0003013,GO:0003365,GO:0003371,GO:0003379,GO:0003380,GO:0003674,GO:0003824,GO:0003924,GO:0005246,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005834,GO:0005886,GO:0005929,GO:0005937,GO:0006109,GO:0006457,GO:0006873,GO:0006874,GO:0006875,GO:0006884,GO:0006915,GO:0006928,GO:0006935,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007191,GO:0007200,GO:0007204,GO:0007212,GO:0007213,GO:0007223,GO:0007264,GO:0007265,GO:0007267,GO:0007275,GO:0007369,GO:0007398,GO:0007399,GO:0007405,GO:0007423,GO:0007498,GO:0007507,GO:0007584,GO:0007596,GO:0007599,GO:0007600,GO:0007602,GO:0007603,GO:0007606,GO:0008015,GO:0008081,GO:0008092,GO:0008104,GO:0008150,GO:0008217,GO:0008219,GO:0008283,GO:0008356,GO:0008361,GO:0009267,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009606,GO:0009611,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009893,GO:0009898,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010470,GO:0010525,GO:0010528,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010657,GO:0010658,GO:0010659,GO:0010675,GO:0010817,GO:0010906,GO:0012501,GO:0014070,GO:0016020,GO:0016043,GO:0016055,GO:0016056,GO:0016247,GO:0016462,GO:0016477,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0017111,GO:0017145,GO:0019216,GO:0019218,GO:0019220,GO:0019222,GO:0019236,GO:0019725,GO:0019897,GO:0019898,GO:0019899,GO:0019932,GO:0019933,GO:0019935,GO:0022008,GO:0022402,GO:0022603,GO:0022607,GO:0022610,GO:0023051,GO:0023052,GO:0023056,GO:0030003,GO:0030010,GO:0030029,GO:0030036,GO:0030154,GO:0030168,GO:0030334,GO:0030335,GO:0030425,GO:0030447,GO:0030507,GO:0030587,GO:0030865,GO:0030866,GO:0030952,GO:0031090,GO:0031136,GO:0031137,GO:0031139,GO:0031152,GO:0031234,GO:0031253,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0031682,GO:0031982,GO:0032005,GO:0032147,GO:0032268,GO:0032270,GO:0032350,GO:0032501,GO:0032502,GO:0032535,GO:0032870,GO:0032879,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033273,GO:0033554,GO:0033674,GO:0033993,GO:0034694,GO:0034695,GO:0035556,GO:0035567,GO:0035690,GO:0036267,GO:0036293,GO:0036294,GO:0036445,GO:0036477,GO:0040001,GO:0040007,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042060,GO:0042074,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042493,GO:0042578,GO:0042592,GO:0042594,GO:0042622,GO:0042995,GO:0043005,GO:0043010,GO:0043085,GO:0043087,GO:0043209,GO:0043226,GO:0043227,GO:0043326,GO:0043327,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043519,GO:0043547,GO:0043549,GO:0043577,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044093,GO:0044182,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044441,GO:0044444,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044877,GO:0045165,GO:0045176,GO:0045595,GO:0045598,GO:0045859,GO:0045860,GO:0045937,GO:0045995,GO:0046578,GO:0046662,GO:0046999,GO:0047391,GO:0048103,GO:0048383,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0048880,GO:0048881,GO:0048882,GO:0048883,GO:0048915,GO:0048916,GO:0048920,GO:0048925,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050801,GO:0050817,GO:0050877,GO:0050878,GO:0050896,GO:0050909,GO:0051020,GO:0051056,GO:0051128,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051259,GO:0051270,GO:0051272,GO:0051291,GO:0051293,GO:0051294,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051480,GO:0051493,GO:0051593,GO:0051606,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0055057,GO:0055059,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060026,GO:0060027,GO:0060041,GO:0060170,GO:0060255,GO:0060359,GO:0060429,GO:0061343,GO:0061351,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070206,GO:0070208,GO:0070482,GO:0070542,GO:0070783,GO:0070887,GO:0071214,GO:0071229,GO:0071242,GO:0071310,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071407,GO:0071417,GO:0071444,GO:0071453,GO:0071456,GO:0071478,GO:0071482,GO:0071495,GO:0071496,GO:0071840,GO:0071867,GO:0071868,GO:0071869,GO:0071870,GO:0071900,GO:0071902,GO:0071944,GO:0072089,GO:0072359,GO:0072503,GO:0072507,GO:0080090,GO:0090066,GO:0090181,GO:0090207,GO:0090702,GO:0095500,GO:0097305,GO:0097306,GO:0097381,GO:0097447,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098552,GO:0098562,GO:0098588,GO:0098590,GO:0098630,GO:0098722,GO:0098743,GO:0098771,GO:0098772,GO:0098796,GO:0098797,GO:0099106,GO:0099120,GO:0104004,GO:0120025,GO:0120038,GO:0198738,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902531,GO:1902533,GO:1902610,GO:1902622,GO:1902624,GO:1902850,GO:1903047,GO:1903664,GO:1903665,GO:1903725,GO:1903831,GO:1905114,GO:1905144,GO:1905145,GO:1905360,GO:2000026,GO:2000145,GO:2000147,GO:2000241,GO:2000243
EggNOG free text desc.G-protein gamma-subunit binding
EggNOG OGsKOG0286@1,KOG0286@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04147
Hectar predicted targeting categoryother localisation
Exons5
Model size522
Cds size522
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10465.440.1prot_Ecto-sp9_F_contig10465.440.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10465 277..3884 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928256.7418263-CDS-Ecto-sp9_F_contig10465:276..4351622928256.7418263-CDS-Ecto-sp9_F_contig10465:276..435Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 277..435 -
1692277811.4358206-CDS-Ecto-sp9_F_contig10465:276..4351692277811.4358206-CDS-Ecto-sp9_F_contig10465:276..435Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 277..435 -
1622928256.755523-CDS-Ecto-sp9_F_contig10465:1068..11551622928256.755523-CDS-Ecto-sp9_F_contig10465:1068..1155Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 1069..1155 -
1692277811.4492893-CDS-Ecto-sp9_F_contig10465:1068..11551692277811.4492893-CDS-Ecto-sp9_F_contig10465:1068..1155Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 1069..1155 -
1622928256.76965-CDS-Ecto-sp9_F_contig10465:1995..20851622928256.76965-CDS-Ecto-sp9_F_contig10465:1995..2085Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 1996..2085 -
1692277811.4590847-CDS-Ecto-sp9_F_contig10465:1995..20851692277811.4590847-CDS-Ecto-sp9_F_contig10465:1995..2085Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 1996..2085 -
1622928256.7834685-CDS-Ecto-sp9_F_contig10465:2641..27431622928256.7834685-CDS-Ecto-sp9_F_contig10465:2641..2743Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 2642..2743 -
1692277811.4690638-CDS-Ecto-sp9_F_contig10465:2641..27431692277811.4690638-CDS-Ecto-sp9_F_contig10465:2641..2743Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 2642..2743 -
1622928256.7993405-CDS-Ecto-sp9_F_contig10465:3800..38841622928256.7993405-CDS-Ecto-sp9_F_contig10465:3800..3884Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 3801..3884 -
1692277811.4781375-CDS-Ecto-sp9_F_contig10465:3800..38841692277811.4781375-CDS-Ecto-sp9_F_contig10465:3800..3884Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10465 3801..3884 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10465.440.1

>prot_Ecto-sp9_F_contig10465.440.1 ID=prot_Ecto-sp9_F_contig10465.440.1|Name=mRNA_Ecto-sp9_F_contig10465.440.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=174bp
MELAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKN
VFVSGSCDSLAKVWDIREGKCVQTFQGHESDINSVMFFPDGKAFGTGSDD
SSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVW
DVTNSTGIPAYQLAGHEVRATQA*
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mRNA from alignment at Ecto-sp9_F_contig10465:277..3884-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10465.440.1 ID=mRNA_Ecto-sp9_F_contig10465.440.1|Name=mRNA_Ecto-sp9_F_contig10465.440.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3608bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10465:277..3884- (Ectocarpus species9 EcSCA_722f female)
ATGGAATTGGCGCAGGAGTCTATCCTTACCTCCTCCGGAGACAGCACTTG
CATCATCTGGGACGTGGAGATGGGGGTAACGACGGTACGTTACGTTCGCT
TGATTTTTTTTTTTTGTGTATCTTTACCTGCTCATTGTCGTCAATTAGGT
TTCTCGGTTCATGACCAATGGGCACGTGCGGACATGTTTCGTATCTGGCG
CAGCTTTGTGTTTTCTTTTGCGTATTTTCACTTGCTGTGTCATAGAACCG
CAGGAAAATCTTGTTGTGGTCTAGAGTATACTCACACGTTGTGCCTGCTT
GCAGCCACGTTTTTTTTTGCATACGCTACTTTTAGTGTACAGTTCTGAAT
CAGCACCGCCGAAGCAGCGGCGGCAAAATAGCCACGCACCCCAACTTTGG
CGGTCAACTTTGCTCACACCTTGCGTTTGTAGGGCAGCATGGTATCTCTT
TGAACGTTGGTTAGGGCCTGCCGTCTTAGCTTCACTACGGAATTTGTAAG
AAATTAAATTGGTAGCCGCGCCACCCCCCTGGCCGGGGCGACTTGAAGTT
ATTTGCTCCTCAGTGCCCGTTTCTGGCATCTGCGAATTGATGAGGAGTAT
CCGAGTAGTGCATGACTTCGCACGGGCGGTATGCCTATATTTGCCATCGT
ACTCTGTACCAGTAGTGTTTTTTTGTGTTTCTCGGTCATTCCGTTCTTGG
CTTTCCTTTCTCTTCACACCCCCGGGAGGAAGCTCACAGTAGTACAAGTA
GTGCCCATAGGAGAAGCAATGAAATCAGTTGCTTCTCAACACGACTTTTC
TCGGTTGTTGAGGGCATACTGGTGTCCCGTGCAGTCTGTCAAATTTTGCG
GGGGCGTGTTTTTTTTTTCATGTCGGCTTTATGCACAAGCTATATCTCCT
ACTGAAGTAGAGTTGTTGCTGATTTTGCTTGATTTTTCGCAGCCCTGGAG
ATCCTACCTGCACCCTTGCGTAGCATGTGCAACAGTAGCTACAGCAGTAG
GTTGCCCTCTGGTGGTGGTTTTTCATCGCTCCACACCTGCCCGCTCTGCA
TCTTCGTTGCTTCAGAAGTGCCTTCGTTTGTAACCCGCTTGTTGTTGTTT
TTCTCTTTGTAATGTGTGTTGCGTGAATGTGAAAACTACAGGCGCATTTC
ACAGACCACGGTGGTGACGTCATGTCCGTCTCGATCCTGCCGTCCGTAGA
CAAGAACGTCTTCGTCTCGGGATCGTGCGACTCGCTCGCCAAGGTGTGTA
TGTTTTTATTGTCAACCGCGCTAACCGGCTGATCAAGGTTTGTGTGTGTG
TGTGTTTTTTTTCTTGCTAGCATCGACCGCGCTAACCGGCTGACCAATGA
AAATACGTCAGTCTCATTGCGGTTGAAAACACAACATGCTTCTAAAGGCC
ACGATCATGGACCGTGCCAGAGACCACCCGTCCTTCCCTTCCGTTCTTGA
GTCTCTTGTTCCCCTCGTTTTTCCGGACTGGAGCACCGAGACGATGCGGT
CGTTGTTGTTGCCGTCCGTGGGCATCATTCTCCGCAGCCTTTCCCGCTGG
GTGTTTGCCGTGCCTCTTGGAAGCATTTCGGCTCTCTACTACCAACGAAC
AATAACTAAATAAGTAACGTTATTTGTACCTGTTAATTACTTCTACTTGG
TACTGCTTTTCTTCGAGTGTTGATGTTTCCCTGCGTGTTTCTGGTCGGTC
ATACGGTGCCACGAAGTACATTTTAAGCATGTATTTTTTGTTCATCTTGT
TAAAGCCTAAACATGTACACCTATGATGACAAATACCAACGAACGCTAGG
TGTGGGATATCCGCGAGGGCAAGTGCGTGCAGACTTTCCAGGGGCACGAG
TCGGACATCAACTCGGTCATGTTCTTCCCAGACGGCAAGGTGCGGCACGC
CGGAATTATTTAATCATGAGCCGGATGACTGGCTGTTTTGAGGGCGGGGA
AATGGGCGAGCAATGGGGGGCAATTAGTTTCAATCCAAGTTCGTTTTGTT
TGTTGGAAGCATGCTTTCCGTGGTCCTCTTTTGTTTGTTGTTTCCGGTGA
AGGTTCATGGCGTTGCTTTGCTTTGCTGACCATCAGATGGTTGGCCGTTA
AATTTTCTCGGCTGAGGAGTAGTCGGGTGTCCTTGTAGACCAAAGGATGG
TAGGCGAGCATCGTAGCGCATCCGGACGGCGAGAGCATGACCCAAGCAGC
GAAGCCACTCTAAACCGCGTTTTGTTTTCCACCACCACGATAGAAAAGAG
AGAGAGAGAGAGACAGAAACACACACACACAGGGAGAGAGACAGAGAGAG
GCATATTAGGAACAATAAATACGAAGACAGAAAGAGACTACCCGTTGGAG
ATATAACCAATCGCAGTCGAAGGGGATGTGTTGGAGTCTTTGCAGTGAGT
GGAGGGAAACCGGCTGAAAACTGGGCTTATTTCGAGTCTAGTTAAGCCTA
TACACTGAAATATTATCAGTGATGCCAGCTGGTGCTAATCACAAGAACAT
CTGTATAGGTTCAAATATCACAAGGCGTATCACGGAGCAACGAGGGGCTC
CGACACAGGTACTCTCCAGCATCACATACCTACCCAAGAGGCCGCGCAGC
CGGGTGTTACGACCGGGTACACCAACATCTGGATGTTGGCCGTTTGAGAC
ACAGGCAATCGTTCATTGGTCAAACGACTCCATGCATGCTTTGGATGACC
CCCGCCCCCCTGCGTGATTGGTTCCCCAGGCATTCGGCACCGGCTCGGAT
GACTCTAGCTGCCGGTTGTTCGACATGCGGTGCTACGGAGAGGCCAACTA
CTTCGGAAATGACAAGGTGCGTCGTCTTGGTCTTGCGTGTCGTTGCCGTC
TCTAGCTGTTGTGGTAGTGGTGGTGGTTGTGGTCTGCCGTCTTCGTCTTT
GCTTGTTGTTGTCTTTGTCATTGTTGTCGCTGTTTGTCGGCGCGTGGTGT
GCTTGCGTTCGCTTTCTGTATGCGCTAGCACCGTGCGGATGGGTCGGCCT
TGTTGTCTCTCATGCTACTGTAGCGGAACGGTGTGATTCCGGCTCCTGGT
TCCTCCTGCGTTTGATATCGTGGATGCCTTTGTTTGGTCTACGGCAAGCT
ACCCCCCCCCGCGCCTAATCTGTCTATTTAGGCTGTTCGTTCGTAGAATT
CTCTGCTCGTGTGTCGAGACAGCATTTGTTACGCTGTTCATGTGCTCGTT
ATTCTTGATTTCGTCAGCTAACTCCTCCAAAAACCCAACAACAAATAAGG
TATACTTCGAAGTACTACATGATATGATTTATGTCTTCGGGCCTTCTTGG
GTTCTTTTATCCTCTGGTGCATCCTTGGGTCATTTTGCGCCTGTTTGGGT
GCTTTAGAATCTATTGCTCATCATCTGCCTGTCGGGTCTCGTTGTAATTG
GTGGTTTGCTTGTGGCGACGGTCTATTTCGGCTCTTCTCGCTTTGTCAGA
TTCTGTGCGGCATCACGTCCGTGGCCTTCTCGCGGAGTGGTCGACTCTTG
TTCGCGGGCTACGACGATTACAACTGTTACGTCTGGGACGTGACGAACAG
CACGGGCATCCCGGCCTACCAGCTTGCAGGGCACGAGGTACGGGCAACAC
AAGCTTGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10465:277..3884-

>mRNA_Ecto-sp9_F_contig10465.440.1 ID=mRNA_Ecto-sp9_F_contig10465.440.1|Name=mRNA_Ecto-sp9_F_contig10465.440.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1044bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10465:277..3884- (Ectocarpus species9 EcSCA_722f female)
ATGGAATTGGCGCAGGAGTCTATCCTTACCTCCTCCGGAGACAGCACTTG
CATCATCTGGGACGTGGAGATGGGGGTAACGACGATGGAATTGGCGCAGG
AGTCTATCCTTACCTCCTCCGGAGACAGCACTTGCATCATCTGGGACGTG
GAGATGGGGGTAACGACGGCGCATTTCACAGACCACGGTGGTGACGTCAT
GTCCGTCTCGATCCTGCCGTCCGTAGACAAGAACGTCTTCGTCTCGGGAT
CGTGCGACTCGCTCGCCAAGGCGCATTTCACAGACCACGGTGGTGACGTC
ATGTCCGTCTCGATCCTGCCGTCCGTAGACAAGAACGTCTTCGTCTCGGG
ATCGTGCGACTCGCTCGCCAAGGTGTGGGATATCCGCGAGGGCAAGTGCG
TGCAGACTTTCCAGGGGCACGAGTCGGACATCAACTCGGTCATGTTCTTC
CCAGACGGCAAGGTGTGGGATATCCGCGAGGGCAAGTGCGTGCAGACTTT
CCAGGGGCACGAGTCGGACATCAACTCGGTCATGTTCTTCCCAGACGGCA
AGGCATTCGGCACCGGCTCGGATGACTCTAGCTGCCGGTTGTTCGACATG
CGGTGCTACGGAGAGGCCAACTACTTCGGAAATGACAAGGCATTCGGCAC
CGGCTCGGATGACTCTAGCTGCCGGTTGTTCGACATGCGGTGCTACGGAG
AGGCCAACTACTTCGGAAATGACAAGATTCTGTGCGGCATCACGTCCGTG
GCCTTCTCGCGGAGTGGTCGACTCTTGTTCGCGGGCTACGACGATTACAA
CTGTTACGTCTGGGACGTGACGAACAGCACGGGCATCCCGGCCTACCAGC
TTGCAGGGCACGAGGTACGGGCAACACAAGCTTGAATTCTGTGCGGCATC
ACGTCCGTGGCCTTCTCGCGGAGTGGTCGACTCTTGTTCGCGGGCTACGA
CGATTACAACTGTTACGTCTGGGACGTGACGAACAGCACGGGCATCCCGG
CCTACCAGCTTGCAGGGCACGAGGTACGGGCAACACAAGCTTGA
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